Cow genome map

Conread name: Ss1.1-Pig4-TMW8053L10.5

Conread position: 1-842
Cow position: chr8:1569664-1570551 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 35

Conread position: 2-262
Cow position: chr8:2234192-2233927 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 81, 66

Conread position: 5-233
Cow position: chr8:36633965-36633731 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 66

Conread position: 5-352
Cow position: chr8:29032316-29031962 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 63

Conread position: 5-592
Cow position: chr8:56751948-56752537 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 349
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 6, 67

Conread position: 6-447
Cow position: chr8:46716291-46715849 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 287
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 265, 48

Conread position: 8-244
Cow position: chr8:36333761-36333519 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 68

Conread position: 8-353
Cow position: chr8:32317034-32316676 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 156

Conread position: 8-400
Cow position: chr8:17382561-17382155 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 28

Conread position: 8-410
Cow position: chr8:44241136-44240723 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 24

Conread position: 8-410
Cow position: chr8:58855238-58855649 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 78, 60

Conread position: 8-411
Cow position: chr8:29629062-29628643 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 28

Conread position: 8-464
Cow position: chr8:6062919-6062470 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 315
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 28

Conread position: 8-464
Cow position: chr8:38393183-38393665 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 317
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 78, 62

Conread position: 8-475
Cow position: chr8:21154794-21154305 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 318
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 241

Conread position: 8-475
Cow position: chr8:30490377-30489884 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 324
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 78, 60

Conread position: 8-492
Cow position: chr8:42153748-42153249 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 321
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 60

Conread position: 8-555
Cow position: chr8:6465427-6465987 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 372
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 62

Conread position: 8-739
Cow position: chr8:42486462-42487231 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 473
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 68

Conread position: 8-766
Cow position: chr8:26877796-26878608 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 518
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 24, 28

Conread position: 8-766
Cow position: chr8:32435293-32434499 (view UCSC Genome Browser custom track)
Alignm length: 814
Alignm identity: 511
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 79, 20

Conread position: 8-842
Cow position: chr8:32629457-32628583 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-868
Cow position: chr8:18403777-18402871 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 556
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 108

Conread position: 8-881
Cow position: chr8:53837498-53838401 (view UCSC Genome Browser custom track)
Alignm length: 922
Alignm identity: 566
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 116, 68

Conread position: 8-885
Cow position: chr8:9738087-9738995 (view UCSC Genome Browser custom track)
Alignm length: 929
Alignm identity: 570
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr8:1467676-1468606 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 584
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 148

Conread position: 8-893
Cow position: chr8:8515533-8514597 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr8:10750897-10751828 (view UCSC Genome Browser custom track)
Alignm length: 945
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 55

Conread position: 8-893
Cow position: chr8:14630679-14629747 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr8:15223360-15224282 (view UCSC Genome Browser custom track)
Alignm length: 940
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr8:21091783-21090851 (view UCSC Genome Browser custom track)
Alignm length: 939
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr8:21251794-21252720 (view UCSC Genome Browser custom track)
Alignm length: 938
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr8:42318719-42317789 (view UCSC Genome Browser custom track)
Alignm length: 947
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-893
Cow position: chr8:50431594-50430662 (view UCSC Genome Browser custom track)
Alignm length: 950
Alignm identity: 595
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 78, 60

Conread position: 8-893
Cow position: chr8:55271977-55271048 (view UCSC Genome Browser custom track)
Alignm length: 942
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 28

Conread position: 8-918
Cow position: chr8:39358595-39359507 (view UCSC Genome Browser custom track)
Alignm length: 935
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 99

Conread position: 8-921
Cow position: chr8:5019562-5020515 (view UCSC Genome Browser custom track)
Alignm length: 966
Alignm identity: 592
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 76, 60

Conread position: 8-921
Cow position: chr8:25774090-25773132 (view UCSC Genome Browser custom track)
Alignm length: 969
Alignm identity: 585
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 79, 61

Conread position: 8-921
Cow position: chr8:49285512-49284564 (view UCSC Genome Browser custom track)
Alignm length: 963
Alignm identity: 590
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 78, 60

Conread position: 9-945
Cow position: chr8:23597481-23598425 (view UCSC Genome Browser custom track)
Alignm length: 977
Alignm identity: 604
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 73, 50

Conread position: 11-464
Cow position: chr8:30156660-30157134 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 311
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 68

Conread position: 11-475
Cow position: chr8:3955598-3956081 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 317
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 76, 59

Conread position: 14-893
Cow position: chr8:6203724-6202807 (view UCSC Genome Browser custom track)
Alignm length: 928
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 22

Conread position: 15-380
Cow position: chr8:29620657-29620284 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 48

Conread position: 15-407
Cow position: chr8:55084308-55084701 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 270
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 72, 16

Conread position: 15-410
Cow position: chr8:3854473-3854068 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 261
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 62

Conread position: 15-473
Cow position: chr8:55087097-55087584 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 310
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 52

Conread position: 15-541
Cow position: chr8:58318298-58318835 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 367
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 39

Conread position: 15-562
Cow position: chr8:46048886-46049442 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 362
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 48

Conread position: 15-843
Cow position: chr8:8103749-8102872 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 545
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 70, 388

Conread position: 15-843
Cow position: chr8:11835089-11835959 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 528
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 53

Conread position: 15-935
Cow position: chr8:47659764-47658807 (view UCSC Genome Browser custom track)
Alignm length: 977
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 55

Conread position: 16-407
Cow position: chr8:38044571-38044166 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 108, 19

Conread position: 24-755
Cow position: chr8:53821465-53820730 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 465
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 98, 39

Conread position: 24-765
Cow position: chr8:3333593-3334381 (view UCSC Genome Browser custom track)
Alignm length: 794
Alignm identity: 487
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 63, 46

Conread position: 35-788
Cow position: chr8:1109774-1110552 (view UCSC Genome Browser custom track)
Alignm length: 801
Alignm identity: 500
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 40

Conread position: 35-893
Cow position: chr8:1346380-1345491 (view UCSC Genome Browser custom track)
Alignm length: 909
Alignm identity: 566
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 34

Conread position: 35-946
Cow position: chr8:46118369-46119302 (view UCSC Genome Browser custom track)
Alignm length: 960
Alignm identity: 586
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 134

Conread position: 36-671
Cow position: chr8:37267126-37267754 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 419
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 39, 121

Conread position: 37-881
Cow position: chr8:8913303-8914194 (view UCSC Genome Browser custom track)
Alignm length: 908
Alignm identity: 571
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 33

Conread position: 37-922
Cow position: chr8:50928523-50927594 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 562
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 39

Conread position: 39-893
Cow position: chr8:1321601-1322499 (view UCSC Genome Browser custom track)
Alignm length: 907
Alignm identity: 551
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 85, 37

Conread position: 42-562
Cow position: chr8:19443573-19444089 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 337
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 76

Conread position: 46-411
Cow position: chr8:1501690-1501315 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 245
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 46-893
Cow position: chr8:1151690-1150813 (view UCSC Genome Browser custom track)
Alignm length: 895
Alignm identity: 548
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 78, 24

Conread position: 56-475
Cow position: chr8:14581399-14580975 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 273
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 14

Conread position: 70-752
Cow position: chr8:6183166-6182473 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 439
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 15, 91

Conread position: 134-416
Cow position: chr8:33691675-33691960 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 93

Conread position: 135-464
Cow position: chr8:1431230-1431581 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 232
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 245

Conread position: 160-411
Cow position: chr8:1016867-1017128 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 218

Conread position: 178-945
Cow position: chr8:22155334-22154540 (view UCSC Genome Browser custom track)
Alignm length: 811
Alignm identity: 489
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 199, 7

Conread position: 179-843
Cow position: chr8:21153570-21152870 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 432
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 262

Conread position: 189-475
Cow position: chr8:21042474-21042780 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 189

Conread position: 208-555
Cow position: chr8:38038898-38038550 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 273

Conread position: 229-926
Cow position: chr8:31570001-31569277 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 464
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 126

Conread position: 240-836
Cow position: chr8:19576485-19577090 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 406
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 78

Conread position: 311-933
Cow position: chr8:51674016-51674669 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 395
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 222

Conread position: 317-942
Cow position: chr8:26485293-26484634 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 426
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 164

Conread position: 327-946
Cow position: chr8:4901782-4902438 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 420
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 223

Conread position: 349-791
Cow position: chr8:38895135-38895579 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 304
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 127

Conread position: 349-881
Cow position: chr8:29037835-29038390 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 372
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 12

Conread position: 486-941
Cow position: chr8:6377813-6377349 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 303
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 97, 41

Conread position: 601-941
Cow position: chr8:40415292-40415634 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 16

Conread position: 619-900
Cow position: chr8:35806774-35806487 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 119

Conread position: 621-943
Cow position: chr8:60647789-60648113 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 90, 9

Conread position: 622-921
Cow position: chr8:26013477-26013781 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 193
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 195, 254

Conread position: 626-945
Cow position: chr8:47652290-47651971 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 191, 102

Conread position: 643-943
Cow position: chr8:32498037-32497723 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 208
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 32, 141

Conread position: 644-945
Cow position: chr8:37980549-37980852 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 34

Conread position: 666-945
Cow position: chr8:42589953-42590230 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 151, 80

Conread position: 677-926
Cow position: chr8:45057012-45056758 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 10

Conread position: 687-920
Cow position: chr8:35581405-35581169 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 98

Conread position: 707-926
Cow position: chr8:4299979-4300193 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 9

Show alignments to all cow chromosomes.