Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8053L10.5 |
| Conread position: | 1-376 |
| Cow position: | chrX:22076824-22076439 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 1-407 |
| Cow position: | chrX:10754678-10755095 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 1-410 |
| Cow position: | chrX:24807443-24807029 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 110, 67 |
| Conread position: | 1-420 |
| Cow position: | chrX:10706828-10707240 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 149, 86 |
| Conread position: | 1-930 |
| Cow position: | chrX:26342080-26341130 (view UCSC Genome Browser custom track) |
| Alignm length: | 974 |
| Alignm identity: | 608 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 5 |
| Conread position: | 2-411 |
| Cow position: | chrX:34093723-34093298 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 34 |
| Conread position: | 2-893 |
| Cow position: | chrX:15978848-15977912 (view UCSC Genome Browser custom track) |
| Alignm length: | 948 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 5-411 |
| Cow position: | chrX:9127192-9127612 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 27, 31 |
| Conread position: | 5-921 |
| Cow position: | chrX:30230001-30229043 (view UCSC Genome Browser custom track) |
| Alignm length: | 973 |
| Alignm identity: | 608 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 71 |
| Conread position: | 8-322 |
| Cow position: | chrX:13653416-13653724 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 8-359 |
| Cow position: | chrX:16406697-16407047 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 8-400 |
| Cow position: | chrX:2047204-2047603 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-410 |
| Cow position: | chrX:23453941-23453524 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 8-411 |
| Cow position: | chrX:24446098-24445679 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-411 |
| Cow position: | chrX:24730760-24731179 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-411 |
| Cow position: | chrX:30437017-30437436 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-463 |
| Cow position: | chrX:22126655-22126191 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 116, 55 |
| Conread position: | 8-464 |
| Cow position: | chrX:18899695-18899231 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 312 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 8-464 |
| Cow position: | chrX:21225590-21226072 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 313 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 8-475 |
| Cow position: | chrX:20741517-20741026 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-492 |
| Cow position: | chrX:23388437-23387926 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-538 |
| Cow position: | chrX:14217999-14217459 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 151 |
| Conread position: | 8-552 |
| Cow position: | chrX:12652378-12651809 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-562 |
| Cow position: | chrX:20512447-20511895 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 8-731 |
| Cow position: | chrX:30167962-30167205 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 479 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-737 |
| Cow position: | chrX:37814260-37815032 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 487 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 73, 466 |
| Conread position: | 8-743 |
| Cow position: | chrX:12345051-12345830 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 480 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-766 |
| Cow position: | chrX:2486766-2487551 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 484 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-766 |
| Cow position: | chrX:14596969-14597767 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 68 |
| Conread position: | 8-828 |
| Cow position: | chrX:13072335-13071474 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 549 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-828 |
| Cow position: | chrX:13092895-13092034 (view UCSC Genome Browser custom track) |
| Alignm length: | 874 |
| Alignm identity: | 549 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-830 |
| Cow position: | chrX:16701794-16702642 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 533 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-830 |
| Cow position: | chrX:29095205-29094347 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-843 |
| Cow position: | chrX:387250-388123 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 8-843 |
| Cow position: | chrX:4906881-4905997 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 557 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-843 |
| Cow position: | chrX:12464117-12464998 (view UCSC Genome Browser custom track) |
| Alignm length: | 890 |
| Alignm identity: | 542 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 8-880 |
| Cow position: | chrX:14461428-14462349 (view UCSC Genome Browser custom track) |
| Alignm length: | 928 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-881 |
| Cow position: | chrX:3359941-3360851 (view UCSC Genome Browser custom track) |
| Alignm length: | 929 |
| Alignm identity: | 574 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 8-881 |
| Cow position: | chrX:22810008-22810920 (view UCSC Genome Browser custom track) |
| Alignm length: | 922 |
| Alignm identity: | 565 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-881 |
| Cow position: | chrX:26756530-26755609 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 580 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 8-881 |
| Cow position: | chrX:29911448-29912371 (view UCSC Genome Browser custom track) |
| Alignm length: | 929 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 62 |
| Conread position: | 8-881 |
| Cow position: | chrX:32065052-32064138 (view UCSC Genome Browser custom track) |
| Alignm length: | 932 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-881 |
| Cow position: | chrX:36536616-36535699 (view UCSC Genome Browser custom track) |
| Alignm length: | 928 |
| Alignm identity: | 573 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 8-881 |
| Cow position: | chrX:37851256-37852168 (view UCSC Genome Browser custom track) |
| Alignm length: | 923 |
| Alignm identity: | 567 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-883 |
| Cow position: | chrX:3083023-3082101 (view UCSC Genome Browser custom track) |
| Alignm length: | 933 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-883 |
| Cow position: | chrX:13407169-13406253 (view UCSC Genome Browser custom track) |
| Alignm length: | 926 |
| Alignm identity: | 569 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 8-885 |
| Cow position: | chrX:5333318-5332396 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 583 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-891 |
| Cow position: | chrX:30181815-30180885 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 577 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 8-893 |
| Cow position: | chrX:2814367-2813441 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:5360122-5361051 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 581 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:5865252-5866187 (view UCSC Genome Browser custom track) |
| Alignm length: | 945 |
| Alignm identity: | 586 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:6580054-6580976 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 573 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:7754016-7754947 (view UCSC Genome Browser custom track) |
| Alignm length: | 947 |
| Alignm identity: | 590 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:9010449-9011373 (view UCSC Genome Browser custom track) |
| Alignm length: | 945 |
| Alignm identity: | 588 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:11462883-11461951 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 574 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 8-893 |
| Cow position: | chrX:12359000-12359929 (view UCSC Genome Browser custom track) |
| Alignm length: | 944 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:16045088-16046014 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 575 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 8-893 |
| Cow position: | chrX:18221529-18222456 (view UCSC Genome Browser custom track) |
| Alignm length: | 937 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:18657691-18656764 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 590 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:19475038-19474107 (view UCSC Genome Browser custom track) |
| Alignm length: | 949 |
| Alignm identity: | 606 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 28 |
| Conread position: | 8-893 |
| Cow position: | chrX:24412142-24413068 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 578 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 8-893 |
| Cow position: | chrX:24770740-24769815 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 8-893 |
| Cow position: | chrX:27424173-27423229 (view UCSC Genome Browser custom track) |
| Alignm length: | 956 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 331 |
| Conread position: | 8-893 |
| Cow position: | chrX:35531972-35532896 (view UCSC Genome Browser custom track) |
| Alignm length: | 938 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 68 |
| Conread position: | 8-894 |
| Cow position: | chrX:27304062-27304971 (view UCSC Genome Browser custom track) |
| Alignm length: | 930 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 8-921 |
| Cow position: | chrX:10867736-10866791 (view UCSC Genome Browser custom track) |
| Alignm length: | 961 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-921 |
| Cow position: | chrX:23279140-23280094 (view UCSC Genome Browser custom track) |
| Alignm length: | 965 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 8-921 |
| Cow position: | chrX:23394718-23395677 (view UCSC Genome Browser custom track) |
| Alignm length: | 967 |
| Alignm identity: | 582 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 8-921 |
| Cow position: | chrX:23573691-23572747 (view UCSC Genome Browser custom track) |
| Alignm length: | 967 |
| Alignm identity: | 599 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 79, 55 |
| Conread position: | 8-925 |
| Cow position: | chrX:23021427-23022393 (view UCSC Genome Browser custom track) |
| Alignm length: | 975 |
| Alignm identity: | 592 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 9-893 |
| Cow position: | chrX:31494847-31495778 (view UCSC Genome Browser custom track) |
| Alignm length: | 938 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 10-250 |
| Cow position: | chrX:30976928-30976681 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 11-475 |
| Cow position: | chrX:21766745-21767235 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 11-892 |
| Cow position: | chrX:10529671-10528744 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 580 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 11-893 |
| Cow position: | chrX:8481568-8482488 (view UCSC Genome Browser custom track) |
| Alignm length: | 932 |
| Alignm identity: | 568 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 11-893 |
| Cow position: | chrX:19397890-19398819 (view UCSC Genome Browser custom track) |
| Alignm length: | 945 |
| Alignm identity: | 597 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 11-893 |
| Cow position: | chrX:20357887-20356958 (view UCSC Genome Browser custom track) |
| Alignm length: | 936 |
| Alignm identity: | 569 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 14-411 |
| Cow position: | chrX:5281663-5281254 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 14-788 |
| Cow position: | chrX:3419102-3418285 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 511 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 14-881 |
| Cow position: | chrX:21342530-21343425 (view UCSC Genome Browser custom track) |
| Alignm length: | 920 |
| Alignm identity: | 564 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 110, 62 |
| Conread position: | 14-893 |
| Cow position: | chrX:17053680-17054609 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 14-893 |
| Cow position: | chrX:22565569-22564642 (view UCSC Genome Browser custom track) |
| Alignm length: | 945 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 14-893 |
| Cow position: | chrX:28754221-28753295 (view UCSC Genome Browser custom track) |
| Alignm length: | 943 |
| Alignm identity: | 599 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 15-383 |
| Cow position: | chrX:20732374-20732747 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 15-475 |
| Cow position: | chrX:37820277-37820742 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 300 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 37 |
| Conread position: | 15-476 |
| Cow position: | chrX:16710083-16710572 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 15-536 |
| Cow position: | chrX:7174882-7175401 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 351 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 15-736 |
| Cow position: | chrX:7810837-7810080 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 472 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 15-783 |
| Cow position: | chrX:38149715-38150524 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 143 |
| Conread position: | 18-536 |
| Cow position: | chrX:18919776-18920298 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 24-465 |
| Cow position: | chrX:20134020-20133561 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 35-842 |
| Cow position: | chrX:43437767-43436910 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 37-394 |
| Cow position: | chrX:8961682-8961312 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 37-407 |
| Cow position: | chrX:24444927-24444545 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 37-841 |
| Cow position: | chrX:23133744-23134579 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 533 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 46-410 |
| Cow position: | chrX:31727624-31728004 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 46-411 |
| Cow position: | chrX:12667178-12666800 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 56-541 |
| Cow position: | chrX:13243816-13244317 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 65-926 |
| Cow position: | chrX:30090849-30089970 (view UCSC Genome Browser custom track) |
| Alignm length: | 903 |
| Alignm identity: | 551 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 86-407 |
| Cow position: | chrX:15569724-15569386 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 210 |
| Conread position: | 88-883 |
| Cow position: | chrX:27317421-27318264 (view UCSC Genome Browser custom track) |
| Alignm length: | 849 |
| Alignm identity: | 518 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 89-893 |
| Cow position: | chrX:19607868-19608716 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 526 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 35, 294 |
| Conread position: | 120-921 |
| Cow position: | chrX:21581667-21582513 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 524 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 135-400 |
| Cow position: | chrX:302346-302620 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 135-411 |
| Cow position: | chrX:36194143-36194431 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 245 |
| Conread position: | 135-475 |
| Cow position: | chrX:38963471-38963111 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 135-770 |
| Cow position: | chrX:20366926-20366261 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 422 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 135-788 |
| Cow position: | chrX:3466117-3465429 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 421 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 110 |
| Conread position: | 144-893 |
| Cow position: | chrX:26274399-26275180 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 461 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 383 |
| Conread position: | 158-408 |
| Cow position: | chrX:23073413-23073672 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 162 |
| Conread position: | 158-466 |
| Cow position: | chrX:27645322-27645649 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 132 |
| Conread position: | 158-789 |
| Cow position: | chrX:30112400-30113036 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 413 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 46, 138 |
| Conread position: | 160-893 |
| Cow position: | chrX:672720-671952 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 479 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 176-574 |
| Cow position: | chrX:23236176-23236585 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 127 |
| Conread position: | 176-749 |
| Cow position: | chrX:25406459-25405859 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 394 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 178-562 |
| Cow position: | chrX:2118104-2117713 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 200 |
| Conread position: | 180-555 |
| Cow position: | chrX:9086002-9086380 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 203-540 |
| Cow position: | chrX:19621675-19622026 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 27, 279 |
| Conread position: | 208-942 |
| Cow position: | chrX:39764895-39765650 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 504 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 230-893 |
| Cow position: | chrX:26231418-26230717 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 448 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 15, 296 |
| Conread position: | 230-929 |
| Cow position: | chrX:20581675-20582358 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 452 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 235-766 |
| Cow position: | chrX:4413235-4413782 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 355 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 241-773 |
| Cow position: | chrX:15575324-15574771 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 366 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 256-615 |
| Cow position: | chrX:1013457-1013819 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 317-945 |
| Cow position: | chrX:29196198-29196850 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 410 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 142 |
| Conread position: | 400-946 |
| Cow position: | chrX:31502935-31503490 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 350 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 157, 58 |
| Conread position: | 471-946 |
| Cow position: | chrX:16859078-16858575 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 323 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 90, 50 |
| Conread position: | 595-945 |
| Cow position: | chrX:10823351-10823000 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 595-946 |
| Cow position: | chrX:29029952-29029605 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 616-926 |
| Cow position: | chrX:11905239-11904923 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 118, 112 |
| Conread position: | 617-946 |
| Cow position: | chrX:23327042-23326707 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 173, 185 |
| Conread position: | 618-889 |
| Cow position: | chrX:28132863-28133137 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 172, 208 |
| Conread position: | 618-899 |
| Cow position: | chrX:17067340-17067062 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 618-946 |
| Cow position: | chrX:10410305-10409992 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 172, 55 |
| Conread position: | 621-913 |
| Cow position: | chrX:18289318-18289024 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 65 |
| Conread position: | 621-945 |
| Cow position: | chrX:13654258-13654589 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 621-946 |
| Cow position: | chrX:17159353-17159020 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 622-921 |
| Cow position: | chrX:11951004-11950700 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 181, 174 |
| Conread position: | 626-941 |
| Cow position: | chrX:17523456-17523136 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 187, 106 |
| Conread position: | 626-945 |
| Cow position: | chrX:9155988-9156305 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 176, 188 |
| Conread position: | 627-930 |
| Cow position: | chrX:29022496-29022808 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 627-930 |
| Cow position: | chrX:29028465-29028777 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 628-945 |
| Cow position: | chrX:25321473-25321152 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 628-946 |
| Cow position: | chrX:6026925-6026601 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 629-946 |
| Cow position: | chrX:23236816-23237140 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 161, 243 |
| Conread position: | 633-914 |
| Cow position: | chrX:41860288-41860574 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 196, 75 |
| Conread position: | 643-929 |
| Cow position: | chrX:863103-862817 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 138, 67 |
| Conread position: | 646-947 |
| Cow position: | chrX:37944344-37944041 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 159, 121 |
| Conread position: | 679-946 |
| Cow position: | chrX:21190688-21190957 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 57 |
| Conread position: | 691-945 |
| Cow position: | chrX:15569041-15568782 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 691-946 |
| Cow position: | chrX:6673075-6673335 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 694-906 |
| Cow position: | chrX:515807-516026 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 105 |
| Conread position: | 696-945 |
| Cow position: | chrX:31803729-31803985 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 107 |
| Conread position: | 708-930 |
| Cow position: | chrX:27508429-27508208 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 67 |
Show alignments to all cow chromosomes.