Cow genome map
Conread name: | Ss1.1-Pig4-TMW8053M18.3 |
Conread position: | 2-269 |
Cow position: | chr18:51819784-51819523 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 2-283 |
Cow position: | chr18:51844592-51844315 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 78 |
Conread position: | 3-251 |
Cow position: | chr18:51753423-51753175 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 188 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 117, 43 |
Conread position: | 3-269 |
Cow position: | chr18:51796503-51796235 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 22 |
Conread position: | 5-248 |
Cow position: | chr18:51396820-51397067 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 79 |
Conread position: | 26-248 |
Cow position: | chr18:52441921-52442144 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 153 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 27-227 |
Cow position: | chr18:51373700-51373494 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 159 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 52-248 |
Cow position: | chr18:51771877-51771675 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 160 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 88-248 |
Cow position: | chr18:49039019-49038858 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 9, 24 |
Conread position: | 103-243 |
Cow position: | chr18:50278831-50278970 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 114-251 |
Cow position: | chr18:42073781-42073918 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 115-248 |
Cow position: | chr18:50653457-50653324 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 115-248 |
Cow position: | chr18:52421792-52421925 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-248 |
Cow position: | chr18:51867647-51867779 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 119 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-248 |
Cow position: | chr18:56332270-56332138 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-251 |
Cow position: | chr18:33069671-33069536 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-251 |
Cow position: | chr18:41956384-41956249 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-251 |
Cow position: | chr18:42754458-42754323 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-251 |
Cow position: | chr18:43124997-43124862 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 101 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-251 |
Cow position: | chr18:56288186-56288051 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 44, 34 |
Conread position: | 116-252 |
Cow position: | chr18:44195353-44195217 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 127-251 |
Cow position: | chr18:52015241-52015117 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 104 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 127-251 |
Cow position: | chr18:55531938-55531814 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 248-553 |
Cow position: | chr18:51839870-51839565 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 210 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 24, 141 |
Conread position: | 248-930 |
Cow position: | chr18:51790379-51789691 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 447 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 248-930 |
Cow position: | chr18:51813535-51812850 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 37 |
Conread position: | 248-944 |
Cow position: | chr18:51968545-51969239 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 75 |
Conread position: | 248-956 |
Cow position: | chr18:51873207-51873928 (view UCSC Genome Browser custom track) |
Alignm length: | 724 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 219 |
Conread position: | 250-956 |
Cow position: | chr18:51766566-51765854 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 457 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 35 |
Conread position: | 271-945 |
Cow position: | chr18:51752792-51752117 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 11 |
Conread position: | 448-954 |
Cow position: | chr18:51368895-51368376 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 325 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 52, 24 |
Conread position: | 548-940 |
Cow position: | chr18:42837531-42837136 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 243 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 51, 81 |
Conread position: | 717-938 |
Cow position: | chr18:52427957-52428179 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 25, 151 |
Conread position: | 717-938 |
Cow position: | chr18:52428209-52428431 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 148 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 21, 151 |
Conread position: | 717-939 |
Cow position: | chr18:52447852-52448075 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 146 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 717-948 |
Cow position: | chr18:51839069-51838837 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 161 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 21, 148 |
Conread position: | 717-954 |
Cow position: | chr18:44253819-44253581 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 153 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 717-954 |
Cow position: | chr18:52428545-52428783 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 156 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 21, 118 |
Conread position: | 717-954 |
Cow position: | chr18:52433390-52433628 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 158 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 21, 151 |
Conread position: | 717-954 |
Cow position: | chr18:52433726-52433964 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 158 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 21, 118 |
Conread position: | 717-954 |
Cow position: | chr18:52448020-52448258 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 159 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 21, 224 |
Conread position: | 717-956 |
Cow position: | chr18:42791960-42792200 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 157 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 717-957 |
Cow position: | chr18:50848827-50849068 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 21, 106 |
Conread position: | 718-937 |
Cow position: | chr18:42675080-42674860 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 146 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-937 |
Cow position: | chr18:51751842-51751622 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 149 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-938 |
Cow position: | chr18:51368529-51368308 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 148 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-938 |
Cow position: | chr18:52447433-52447654 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 718-938 |
Cow position: | chr18:52447685-52447906 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 718-940 |
Cow position: | chr18:42744392-42744169 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 150 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-940 |
Cow position: | chr18:51400605-51400828 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 152 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-940 |
Cow position: | chr18:51789484-51789261 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 145 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-940 |
Cow position: | chr18:51812727-51812504 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 147 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-942 |
Cow position: | chr18:51400773-51400998 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 149 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 718-945 |
Cow position: | chr18:43093429-43093201 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 152 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 20, 45 |
Conread position: | 718-945 |
Cow position: | chr18:51752094-51751866 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 171 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 20, 81 |
Conread position: | 718-945 |
Cow position: | chr18:51789568-51789340 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 149 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-954 |
Cow position: | chr18:42744308-42744071 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 159 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 24, 45 |
Conread position: | 718-954 |
Cow position: | chr18:51765841-51765604 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 161 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 20, 102 |
Conread position: | 718-954 |
Cow position: | chr18:51812307-51812070 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 170 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-954 |
Cow position: | chr18:51839236-51838999 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 173 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-956 |
Cow position: | chr18:40324811-40324572 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 157 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 718-956 |
Cow position: | chr18:43168285-43168524 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 153 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-959 |
Cow position: | chr18:50848660-50848902 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 156 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 718-959 |
Cow position: | chr18:51400437-51400679 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 162 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 718-960 |
Cow position: | chr18:52447265-52447508 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 164 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 20, 117 |
Conread position: | 719-945 |
Cow position: | chr18:51812810-51812583 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 149 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 719-954 |
Cow position: | chr18:51789651-51789415 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 155 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 720-948 |
Cow position: | chr18:51400691-51400920 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 152 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 17, 63 |
Conread position: | 723-948 |
Cow position: | chr18:49033052-49032826 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 150 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 723-948 |
Cow position: | chr18:51400862-51401088 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 148 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 723-949 |
Cow position: | chr18:51400526-51400753 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 149 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 728-948 |
Cow position: | chr18:51874310-51874528 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 147 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 142, 7 |
Conread position: | 731-943 |
Cow position: | chr18:40075026-40075238 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 148 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 55, 51 |
Conread position: | 732-939 |
Cow position: | chr18:51765239-51765031 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 140 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 6, 52 |
Conread position: | 736-940 |
Cow position: | chr18:51400288-51400492 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 139 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 75, 82 |
Conread position: | 737-938 |
Cow position: | chr18:51367586-51367385 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 144 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 737-954 |
Cow position: | chr18:51874401-51874618 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 145 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 35, 25 |
Conread position: | 737-954 |
Cow position: | chr18:52446949-52447166 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 144 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 738-941 |
Cow position: | chr18:51839383-51839180 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 738-948 |
Cow position: | chr18:51789715-51789505 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 152 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 738-948 |
Cow position: | chr18:51812874-51812664 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 740-944 |
Cow position: | chr18:51969353-51969557 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 139 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 128, 122 |
Conread position: | 741-942 |
Cow position: | chr18:51839548-51839347 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 134 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 745-940 |
Cow position: | chr18:42744028-42743833 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 131 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 745-956 |
Cow position: | chr18:44184617-44184406 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 142 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 125, 113 |
Conread position: | 746-960 |
Cow position: | chr18:51839123-51838910 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 144 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 211, 0 |
Conread position: | 752-949 |
Cow position: | chr18:53636020-53635823 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 137 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 83, 72 |
Show alignments to all cow chromosomes.