Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8054E11.3 |
| Conread position: | 1-119 |
| Cow position: | chr19:903533-903414 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-159 |
| Cow position: | chr19:14180494-14180651 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-184 |
| Cow position: | chr19:6556128-6555945 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-185 |
| Cow position: | chr19:39696991-39696807 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-185 |
| Cow position: | chr19:51775422-51775607 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-186 |
| Cow position: | chr19:3221618-3221434 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-186 |
| Cow position: | chr19:50020456-50020640 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 1-199 |
| Cow position: | chr19:12601197-12601393 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 182, 116 |
| Conread position: | 1-215 |
| Cow position: | chr19:32683072-32682866 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 1-226 |
| Cow position: | chr19:1663574-1663349 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 181, 31 |
| Conread position: | 1-232 |
| Cow position: | chr19:27347561-27347781 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 213, 33 |
| Conread position: | 1-234 |
| Cow position: | chr19:1486538-1486774 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1-234 |
| Cow position: | chr19:35782890-35783126 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 35, 143 |
| Conread position: | 1-237 |
| Cow position: | chr19:30561804-30561559 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 227 |
| Conread position: | 1-248 |
| Cow position: | chr19:7065185-7064939 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 157 |
| Conread position: | 1-250 |
| Cow position: | chr19:9098420-9098674 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 137, 121 |
| Conread position: | 1-251 |
| Cow position: | chr19:46873518-46873773 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 1-252 |
| Cow position: | chr19:40884016-40884268 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 96, 232 |
| Conread position: | 1-279 |
| Cow position: | chr19:50561570-50561290 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 15 |
| Conread position: | 1-289 |
| Cow position: | chr19:33648817-33649102 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 1-298 |
| Cow position: | chr19:2019262-2019553 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 1-305 |
| Cow position: | chr19:38397106-38397405 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 153, 29 |
| Conread position: | 1-307 |
| Cow position: | chr19:12209423-12209738 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-307 |
| Cow position: | chr19:46821358-46821051 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 185, 33 |
| Conread position: | 1-312 |
| Cow position: | chr19:30937713-30938037 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 121, 285 |
| Conread position: | 1-319 |
| Cow position: | chr19:1152161-1151845 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 194, 100 |
| Conread position: | 1-323 |
| Cow position: | chr19:14175965-14175627 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 72, 164 |
| Conread position: | 1-336 |
| Cow position: | chr19:4447722-4447380 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 1-336 |
| Cow position: | chr19:19173166-19172827 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 129, 217 |
| Conread position: | 1-347 |
| Cow position: | chr19:25085699-25085370 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 220, 10 |
| Conread position: | 1-350 |
| Cow position: | chr19:4599517-4599169 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 1-350 |
| Cow position: | chr19:20672088-20672430 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 301, 194 |
| Conread position: | 1-350 |
| Cow position: | chr19:35982276-35981925 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 182, 62 |
| Conread position: | 1-354 |
| Cow position: | chr19:40248284-40247923 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 127, 120 |
| Conread position: | 1-355 |
| Cow position: | chr19:5044190-5044534 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 1-355 |
| Cow position: | chr19:30473638-30474002 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 158, 67 |
| Conread position: | 1-356 |
| Cow position: | chr19:36189205-36188861 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 186, 145 |
| Conread position: | 1-356 |
| Cow position: | chr19:37844281-37844635 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 178, 101 |
| Conread position: | 1-359 |
| Cow position: | chr19:2588689-2588330 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 33 |
| Conread position: | 1-359 |
| Cow position: | chr19:9704685-9705052 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 100 |
| Conread position: | 1-359 |
| Cow position: | chr19:14156600-14156960 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 153 |
| Conread position: | 1-359 |
| Cow position: | chr19:20403790-20403424 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 142 |
| Conread position: | 1-359 |
| Cow position: | chr19:28370031-28369665 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 1-359 |
| Cow position: | chr19:28450322-28449967 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 186, 44 |
| Conread position: | 1-359 |
| Cow position: | chr19:33625079-33624719 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 136, 91 |
| Conread position: | 1-359 |
| Cow position: | chr19:48478069-48477715 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 98 |
| Conread position: | 1-361 |
| Cow position: | chr19:427271-427639 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 145 |
| Conread position: | 1-362 |
| Cow position: | chr19:2260940-2261299 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 136, 67 |
| Conread position: | 1-365 |
| Cow position: | chr19:32140504-32140135 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 1-366 |
| Cow position: | chr19:28516322-28516687 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 1-366 |
| Cow position: | chr19:35381572-35381936 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 137, 95 |
| Conread position: | 1-367 |
| Cow position: | chr19:7491597-7491231 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 99 |
| Conread position: | 1-368 |
| Cow position: | chr19:6358260-6358621 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 110, 42 |
| Conread position: | 1-368 |
| Cow position: | chr19:39943399-39943765 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 278, 99 |
| Conread position: | 1-371 |
| Cow position: | chr19:444431-444802 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 182, 142 |
| Conread position: | 1-373 |
| Cow position: | chr19:12057695-12057333 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 1-442 |
| Cow position: | chr19:39339563-39340007 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 33 |
| Conread position: | 1-452 |
| Cow position: | chr19:28912036-28911582 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 182, 67 |
| Conread position: | 2-136 |
| Cow position: | chr19:30717395-30717263 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-271 |
| Cow position: | chr19:1581403-1581677 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 2-337 |
| Cow position: | chr19:29089247-29088916 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 158, 57 |
| Conread position: | 2-346 |
| Cow position: | chr19:743210-743544 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 205, 77 |
| Conread position: | 2-359 |
| Cow position: | chr19:9099122-9098748 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 249 |
| Conread position: | 2-359 |
| Cow position: | chr19:34985593-34985244 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 35 |
| Conread position: | 2-359 |
| Cow position: | chr19:42866971-42866615 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 227 |
| Conread position: | 3-115 |
| Cow position: | chr19:42274717-42274828 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-350 |
| Cow position: | chr19:33593992-33594347 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 134, 73 |
| Conread position: | 3-363 |
| Cow position: | chr19:42580819-42581172 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 133, 62 |
| Conread position: | 4-193 |
| Cow position: | chr19:42295209-42295396 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 4-214 |
| Cow position: | chr19:130342-130553 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 72 |
| Conread position: | 4-297 |
| Cow position: | chr19:35843355-35843062 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 4-361 |
| Cow position: | chr19:3176966-3176603 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 68, 204 |
| Conread position: | 4-368 |
| Cow position: | chr19:1586000-1585648 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 185, 96 |
| Conread position: | 4-433 |
| Cow position: | chr19:28596880-28596441 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 240 |
| Conread position: | 5-116 |
| Cow position: | chr19:20928679-20928568 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-119 |
| Cow position: | chr19:23463589-23463703 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-119 |
| Cow position: | chr19:52147923-52148037 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-127 |
| Cow position: | chr19:21337402-21337524 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-130 |
| Cow position: | chr19:54542490-54542614 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 5-173 |
| Cow position: | chr19:26518828-26518996 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-184 |
| Cow position: | chr19:8273570-8273749 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-186 |
| Cow position: | chr19:28575895-28576076 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-186 |
| Cow position: | chr19:30237211-30237031 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 161, 29 |
| Conread position: | 5-213 |
| Cow position: | chr19:3406683-3406472 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-213 |
| Cow position: | chr19:7078759-7078548 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-235 |
| Cow position: | chr19:36395689-36395456 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-245 |
| Cow position: | chr19:35781379-35781134 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-252 |
| Cow position: | chr19:3086295-3086044 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 178, 65 |
| Conread position: | 5-252 |
| Cow position: | chr19:23488262-23488012 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 5-252 |
| Cow position: | chr19:29367031-29366779 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-252 |
| Cow position: | chr19:29624539-29624287 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-270 |
| Cow position: | chr19:10195916-10195646 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-281 |
| Cow position: | chr19:14157911-14157635 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 160 |
| Conread position: | 5-304 |
| Cow position: | chr19:22391720-22391416 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-328 |
| Cow position: | chr19:930322-929995 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 176, 228 |
| Conread position: | 5-335 |
| Cow position: | chr19:34905822-34906158 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 5-352 |
| Cow position: | chr19:5429300-5429654 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 84 |
| Conread position: | 5-353 |
| Cow position: | chr19:45464636-45464294 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 215, 40 |
| Conread position: | 5-355 |
| Cow position: | chr19:24734640-24734288 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 178, 82 |
| Conread position: | 5-356 |
| Cow position: | chr19:41204724-41205083 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:41836-41475 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 270 |
| Conread position: | 5-359 |
| Cow position: | chr19:164631-164988 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 96, 156 |
| Conread position: | 5-359 |
| Cow position: | chr19:777015-776655 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 119 |
| Conread position: | 5-359 |
| Cow position: | chr19:1293853-1293492 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 120 |
| Conread position: | 5-359 |
| Cow position: | chr19:5902530-5902168 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:7480440-7480793 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 182, 83 |
| Conread position: | 5-359 |
| Cow position: | chr19:8206512-8206856 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 305, 72 |
| Conread position: | 5-359 |
| Cow position: | chr19:19389337-19388975 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:20611837-20611475 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 228 |
| Conread position: | 5-359 |
| Cow position: | chr19:22512747-22512386 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 97 |
| Conread position: | 5-359 |
| Cow position: | chr19:27081912-27082267 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 148 |
| Conread position: | 5-359 |
| Cow position: | chr19:29393845-29393483 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:30037404-30037766 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:30515539-30515886 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 209, 160 |
| Conread position: | 5-359 |
| Cow position: | chr19:31782073-31781712 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:33119221-33119583 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:33528350-33527988 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:43149084-43148722 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:48626562-48626200 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:55164154-55164516 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-359 |
| Cow position: | chr19:55378396-55378036 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 165 |
| Conread position: | 5-368 |
| Cow position: | chr19:208003-207631 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:2269798-2270170 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:5732998-5732628 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 254 |
| Conread position: | 5-368 |
| Cow position: | chr19:9118313-9117942 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:10613731-10613359 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:28794828-28795188 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 178, 138 |
| Conread position: | 5-368 |
| Cow position: | chr19:33876919-33876547 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:36351771-36351406 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 178, 58 |
| Conread position: | 5-368 |
| Cow position: | chr19:39182037-39182409 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:39394704-39394332 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:40790852-40791225 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 5-368 |
| Cow position: | chr19:40848986-40849360 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 5-369 |
| Cow position: | chr19:40016089-40016454 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 5-436 |
| Cow position: | chr19:33945069-33944628 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 373 |
| Conread position: | 5-442 |
| Cow position: | chr19:55843501-55843060 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 178, 67 |
| Conread position: | 5-453 |
| Cow position: | chr19:405651-405195 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 382 |
| Conread position: | 5-453 |
| Cow position: | chr19:4389083-4388629 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 133 |
| Conread position: | 6-290 |
| Cow position: | chr19:12652377-12652083 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 6-355 |
| Cow position: | chr19:55421544-55421192 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 131, 22 |
| Conread position: | 7-214 |
| Cow position: | chr19:27613003-27613212 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 176, 19 |
| Conread position: | 7-368 |
| Cow position: | chr19:435836-436206 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 283 |
| Conread position: | 7-368 |
| Cow position: | chr19:48534229-48533859 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 40 |
| Conread position: | 8-319 |
| Cow position: | chr19:5026692-5027009 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 12-252 |
| Cow position: | chr19:267600-267357 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 113, 90 |
| Conread position: | 15-252 |
| Cow position: | chr19:6590-6358 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 173, 54 |
| Conread position: | 27-366 |
| Cow position: | chr19:175949-175602 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 31-336 |
| Cow position: | chr19:17883440-17883132 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 152, 14 |
| Conread position: | 35-453 |
| Cow position: | chr19:7472531-7472114 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 151, 14 |
| Conread position: | 37-159 |
| Cow position: | chr19:49360231-49360351 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 37-359 |
| Cow position: | chr19:344849-344527 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 177, 114 |
| Conread position: | 39-359 |
| Cow position: | chr19:33573251-33573576 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 53-359 |
| Cow position: | chr19:730539-730848 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 90 |
| Conread position: | 64-337 |
| Cow position: | chr19:5384858-5384582 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 82-359 |
| Cow position: | chr19:3033710-3033975 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 228, 69 |
| Conread position: | 89-334 |
| Cow position: | chr19:42647967-42648217 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 90-359 |
| Cow position: | chr19:35621946-35621664 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 90-359 |
| Cow position: | chr19:47189029-47189304 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 91-403 |
| Cow position: | chr19:47670327-47670008 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 95, 286 |
| Conread position: | 173-359 |
| Cow position: | chr19:15070646-15070452 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 189-336 |
| Cow position: | chr19:6555287-6555137 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 218-356 |
| Cow position: | chr19:1579396-1579255 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.