Cow genome map

Conread name: Ss1.1-Pig4-TMW8054E11.3

Conread position: 1-113
Cow position: chr23:29471909-29472021 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-151
Cow position: chr23:29959715-29959565 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-186
Cow position: chr23:29446549-29446731 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 103

Conread position: 1-187
Cow position: chr23:11405285-11405471 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 22

Conread position: 1-198
Cow position: chr23:28546321-28546517 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 10

Conread position: 1-215
Cow position: chr23:40825199-40824986 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 169

Conread position: 1-226
Cow position: chr23:1535523-1535295 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 173, 192

Conread position: 1-230
Cow position: chr23:40539286-40539515 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 48

Conread position: 1-234
Cow position: chr23:28233291-28233053 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 122, 40

Conread position: 1-251
Cow position: chr23:25553992-25553737 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 42, 100

Conread position: 1-252
Cow position: chr23:7088842-7088593 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 14

Conread position: 1-260
Cow position: chr23:3167451-3167179 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 254

Conread position: 1-260
Cow position: chr23:20025334-20025069 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 182, 0

Conread position: 1-279
Cow position: chr23:6593535-6593807 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 182, 44

Conread position: 1-279
Cow position: chr23:35313846-35314117 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 182, 68

Conread position: 1-280
Cow position: chr23:17404014-17403729 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 185, 0

Conread position: 1-298
Cow position: chr23:416327-416026 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 203
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 193, 203

Conread position: 1-304
Cow position: chr23:29143465-29143166 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 193, 33

Conread position: 1-311
Cow position: chr23:5871005-5871310 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 182, 33

Conread position: 1-320
Cow position: chr23:10424326-10424014 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 129, 33

Conread position: 1-322
Cow position: chr23:24487299-24487620 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 213, 136

Conread position: 1-323
Cow position: chr23:15657439-15657766 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 166, 112

Conread position: 1-324
Cow position: chr23:1311170-1311499 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 266

Conread position: 1-335
Cow position: chr23:6173620-6173952 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 180, 159

Conread position: 1-335
Cow position: chr23:8290854-8290506 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 182, 82

Conread position: 1-339
Cow position: chr23:16999840-16999498 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 1-340
Cow position: chr23:1010155-1010491 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 111, 63

Conread position: 1-340
Cow position: chr23:8388739-8389075 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 213
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 163, 64

Conread position: 1-350
Cow position: chr23:21252693-21252339 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 33

Conread position: 1-351
Cow position: chr23:40371955-40372313 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 88

Conread position: 1-354
Cow position: chr23:16057097-16056751 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 24

Conread position: 1-355
Cow position: chr23:25670384-25670725 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 238
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 58

Conread position: 1-355
Cow position: chr23:38027549-38027908 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 182, 33

Conread position: 1-356
Cow position: chr23:1398830-1399174 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 182, 33

Conread position: 1-359
Cow position: chr23:1325915-1326280 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 62

Conread position: 1-359
Cow position: chr23:2180448-2180812 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 33

Conread position: 1-359
Cow position: chr23:2408812-2409178 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 174

Conread position: 1-359
Cow position: chr23:2532115-2532460 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 16

Conread position: 1-359
Cow position: chr23:4516933-4516575 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 182, 86

Conread position: 1-359
Cow position: chr23:7359856-7359495 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 164

Conread position: 1-359
Cow position: chr23:9193503-9193861 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 182, 62

Conread position: 1-359
Cow position: chr23:16495876-16496228 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 178, 101

Conread position: 1-359
Cow position: chr23:17876478-17876845 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 180, 258

Conread position: 1-359
Cow position: chr23:29459853-29460217 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 134

Conread position: 1-359
Cow position: chr23:29625379-29625010 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 64

Conread position: 1-359
Cow position: chr23:34347275-34346908 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 1-366
Cow position: chr23:8100642-8100290 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 246
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 169, 45

Conread position: 1-366
Cow position: chr23:11128418-11128041 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 1-367
Cow position: chr23:4798778-4799150 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 121, 45

Conread position: 1-443
Cow position: chr23:33817850-33817404 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 279

Conread position: 2-233
Cow position: chr23:1321997-1322231 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 184, 143

Conread position: 2-239
Cow position: chr23:5882702-5882463 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 99

Conread position: 2-359
Cow position: chr23:7065369-7065725 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 10

Conread position: 2-359
Cow position: chr23:11078677-11078318 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 181, 59

Conread position: 2-368
Cow position: chr23:1338094-1338459 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 101

Conread position: 3-213
Cow position: chr23:23193033-23193242 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 134, 93

Conread position: 3-214
Cow position: chr23:20379552-20379337 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 133, 90

Conread position: 3-233
Cow position: chr23:36308602-36308376 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 180, 26

Conread position: 3-322
Cow position: chr23:34469010-34469326 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 167, 174

Conread position: 3-361
Cow position: chr23:14839790-14840141 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 210, 119

Conread position: 3-366
Cow position: chr23:10905274-10904917 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 134, 61

Conread position: 4-356
Cow position: chr23:11814454-11814807 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 32

Conread position: 4-359
Cow position: chr23:20170807-20171163 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 109

Conread position: 4-368
Cow position: chr23:7288155-7288518 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 133, 79

Conread position: 5-114
Cow position: chr23:2529000-2529109 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr23:4266832-4266721 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr23:4581422-4581311 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr23:5458135-5458024 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr23:10674691-10674580 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr23:1113348-1113234 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr23:3416906-3417020 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position: chr23:15020314-15020199 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 5-181
Cow position: chr23:40553726-40553902 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-213
Cow position: chr23:24098524-24098313 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 178, 0

Conread position: 5-234
Cow position: chr23:40773724-40773492 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 170, 178

Conread position: 5-252
Cow position: chr23:671568-671316 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 178, 0

Conread position: 5-252
Cow position: chr23:3730189-3730441 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 178, 0

Conread position: 5-252
Cow position: chr23:8707787-8707535 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 178, 0

Conread position: 5-252
Cow position: chr23:19493245-19492993 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 178, 0

Conread position: 5-277
Cow position: chr23:27313241-27312964 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 184, 0

Conread position: 5-290
Cow position: chr23:21351555-21351843 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 178, 70

Conread position: 5-304
Cow position: chr23:3549798-3550101 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 178, 243

Conread position: 5-304
Cow position: chr23:15180354-15180051 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 29

Conread position: 5-304
Cow position: chr23:31833607-31833906 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 178, 137

Conread position: 5-307
Cow position: chr23:11376921-11377226 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 178, 284

Conread position: 5-320
Cow position: chr23:29447854-29448173 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 188, 0

Conread position: 5-328
Cow position: chr23:36027856-36028185 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 183, 0

Conread position: 5-333
Cow position: chr23:41015325-41014991 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 178, 0

Conread position: 5-336
Cow position: chr23:11070476-11070135 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 0

Conread position: 5-349
Cow position: chr23:3877747-3878098 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 155

Conread position: 5-351
Cow position: chr23:30623105-30623455 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 44

Conread position: 5-355
Cow position: chr23:29043180-29042821 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 5-356
Cow position: chr23:4437014-4436669 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 97

Conread position: 5-356
Cow position: chr23:11343893-11343534 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:771095-771457 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 5-359
Cow position: chr23:2320553-2320909 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 178, 18

Conread position: 5-359
Cow position: chr23:2472904-2473273 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 0

Conread position: 5-359
Cow position: chr23:3286155-3285793 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 5-359
Cow position: chr23:3302251-3301890 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 5-359
Cow position: chr23:4532301-4532663 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:5396184-5396546 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:5441313-5440952 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 107

Conread position: 5-359
Cow position: chr23:10679437-10679799 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:10936900-10937268 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 5-359
Cow position: chr23:11079781-11079418 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 5-359
Cow position: chr23:14215838-14216189 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 189, 64

Conread position: 5-359
Cow position: chr23:14265739-14265381 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 178, 95

Conread position: 5-359
Cow position: chr23:14959561-14959915 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 178, 41

Conread position: 5-359
Cow position: chr23:14970558-14970917 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 31

Conread position: 5-359
Cow position: chr23:21772513-21772876 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:25351756-25351394 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:28222098-28221735 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 5-359
Cow position: chr23:28306241-28305877 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 88, 60

Conread position: 5-359
Cow position: chr23:28987738-28987385 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 69

Conread position: 5-359
Cow position: chr23:31605824-31605462 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:31704291-31703929 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr23:39745256-39744898 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 177, 95

Conread position: 5-366
Cow position: chr23:4636959-4637327 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 259

Conread position: 5-366
Cow position: chr23:17846387-17846025 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 184, 29

Conread position: 5-366
Cow position: chr23:31771872-31772239 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 165

Conread position: 5-368
Cow position: chr23:1959523-1959154 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 243

Conread position: 5-368
Cow position: chr23:2023688-2024060 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 0

Conread position: 5-368
Cow position: chr23:2761294-2760923 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 5-368
Cow position: chr23:4892092-4891720 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr23:5624183-5624548 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 14

Conread position: 5-368
Cow position: chr23:11782182-11781808 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr23:15528983-15528611 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 270

Conread position: 5-368
Cow position: chr23:20152824-20153197 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr23:26828645-26828277 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 95

Conread position: 5-368
Cow position: chr23:27402530-27402161 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 96

Conread position: 5-368
Cow position: chr23:30634198-30634570 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-433
Cow position: chr23:3709798-3709364 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 291
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 178, 92

Conread position: 5-433
Cow position: chr23:28915724-28915299 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 17

Conread position: 5-436
Cow position: chr23:22143914-22144352 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 258

Conread position: 5-438
Cow position: chr23:22170303-22169842 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 309
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 65

Conread position: 6-159
Cow position: chr23:19056957-19057110 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-359
Cow position: chr23:11712271-11712633 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 162, 94

Conread position: 6-359
Cow position: chr23:37199115-37199480 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 6-366
Cow position: chr23:15215442-15215807 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 177, 159

Conread position: 7-198
Cow position: chr23:12864093-12863905 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 7-354
Cow position: chr23:24119949-24119594 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 176, 0

Conread position: 7-359
Cow position: chr23:954406-954762 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 158

Conread position: 7-366
Cow position: chr23:25357740-25357373 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 251

Conread position: 11-355
Cow position: chr23:38584302-38583957 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 6

Conread position: 11-356
Cow position: chr23:10417199-10417553 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 92

Conread position: 15-250
Cow position: chr23:40890162-40889923 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 22-359
Cow position: chr23:26318656-26318320 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 233
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 160, 24

Conread position: 26-453
Cow position: chr23:1048498-1048934 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 157, 335

Conread position: 28-372
Cow position: chr23:21277262-21277612 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 115

Conread position: 31-359
Cow position: chr23:19637527-19637847 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 6

Conread position: 34-356
Cow position: chr23:26684316-26683979 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 117

Conread position: 49-368
Cow position: chr23:2720806-2720480 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 44

Conread position: 50-278
Cow position: chr23:29935625-29935392 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 11

Conread position: 53-359
Cow position: chr23:21008256-21008570 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 130, 0

Conread position: 55-359
Cow position: chr23:13536770-13536466 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 20, 164

Conread position: 61-359
Cow position: chr23:6441692-6441985 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 153, 56

Conread position: 64-298
Cow position: chr23:15567669-15567908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 82-359
Cow position: chr23:3417009-3417294 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 93-365
Cow position: chr23:16611499-16611782 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 90, 50

Conread position: 135-366
Cow position: chr23:20541085-20540848 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 10

Conread position: 148-359
Cow position: chr23:609982-609763 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.