Cow genome map

Conread name: Ss1.1-Pig4-TMW8054E11.3

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 114

Conread position: 1-213
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 196

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 182, 0

Conread position: 1-228
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 24

Conread position: 1-234
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 182, 101

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 185, 205

Conread position: 1-250
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 219, 101

Conread position: 1-252
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 179, 53

Conread position: 1-252
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 181, 24

Conread position: 1-271
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 152, 33

Conread position: 1-292
Cow position:
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 185, 41

Conread position: 1-295
Cow position:
Alignm length: 296
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 213, 99

Conread position: 1-303
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 182, 242

Conread position: 1-306
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 182, 33

Conread position: 1-307
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1-325
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 99

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 154

Conread position: 1-344
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 83, 89

Conread position: 1-351
Cow position:
Alignm length: 360
Alignm identity: 238
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 167, 262

Conread position: 1-351
Cow position:
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 144

Conread position: 1-352
Cow position:
Alignm length: 364
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 109, 151

Conread position: 1-355
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 75

Conread position: 1-355
Cow position:
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 45

Conread position: 1-355
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 131, 84

Conread position: 1-356
Cow position:
Alignm length: 366
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 68

Conread position: 1-356
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 70, 23

Conread position: 1-356
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 185, 53

Conread position: 1-356
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 63

Conread position: 1-359
Cow position:
Alignm length: 365
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 142

Conread position: 1-359
Cow position:
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 111

Conread position: 1-359
Cow position:
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 1-359
Cow position:
Alignm length: 369
Alignm identity: 252
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 185, 60

Conread position: 1-359
Cow position:
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 1-359
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 101

Conread position: 1-359
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 113, 33

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 223
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 185, 300

Conread position: 1-359
Cow position:
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 41

Conread position: 1-359
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 34

Conread position: 1-359
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 83, 45

Conread position: 1-359
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 76

Conread position: 1-359
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 41

Conread position: 1-359
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 55, 101

Conread position: 1-359
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 31, 223

Conread position: 1-359
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 74

Conread position: 1-362
Cow position:
Alignm length: 382
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 135, 84

Conread position: 1-363
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 136, 101

Conread position: 1-365
Cow position:
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 101

Conread position: 1-366
Cow position:
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 1-370
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 185, 36

Conread position: 1-370
Cow position:
Alignm length: 387
Alignm identity: 249
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 381

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 125, 376

Conread position: 1-426
Cow position:
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 29

Conread position: 2-213
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 175, 151

Conread position: 2-213
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 189, 110

Conread position: 2-328
Cow position:
Alignm length: 331
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 145, 81

Conread position: 2-354
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 164, 98

Conread position: 2-355
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 66, 14

Conread position: 2-356
Cow position:
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 43

Conread position: 2-359
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 85

Conread position: 2-366
Cow position:
Alignm length: 376
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 260

Conread position: 2-418
Cow position:
Alignm length: 428
Alignm identity: 262
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 5

Conread position: 3-350
Cow position:
Alignm length: 353
Alignm identity: 216
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 163, 86

Conread position: 3-359
Cow position:
Alignm length: 371
Alignm identity: 238
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 21

Conread position: 3-359
Cow position:
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 183, 69

Conread position: 3-365
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 133

Conread position: 5-109
Cow position:
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-164
Cow position:
Alignm length: 160
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 5-188
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-213
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 20

Conread position: 5-227
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 178, 0

Conread position: 5-234
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 161, 29

Conread position: 5-234
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 5-234
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 181, 31

Conread position: 5-246
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 178, 53

Conread position: 5-252
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 178, 0

Conread position: 5-252
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 5-252
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 5-259
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 160

Conread position: 5-267
Cow position:
Alignm length: 268
Alignm identity: 182
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 178, 0

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 178, 97

Conread position: 5-295
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 178, 84

Conread position: 5-305
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 5-307
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 5-318
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 71

Conread position: 5-319
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 178, 103

Conread position: 5-324
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 178, 0

Conread position: 5-326
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 178, 254

Conread position: 5-336
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 147

Conread position: 5-355
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 118

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 261

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 160

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 361
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 42

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 5-359
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 177

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 176

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 178, 236

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 160

Conread position: 5-359
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 162

Conread position: 5-368
Cow position:
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position:
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 54

Conread position: 5-368
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 361

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 73

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 148

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 88

Conread position: 5-368
Cow position:
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 168

Conread position: 5-369
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 368

Conread position: 5-369
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 161

Conread position: 5-438
Cow position:
Alignm length: 446
Alignm identity: 289
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 178, 160

Conread position: 5-453
Cow position:
Alignm length: 457
Alignm identity: 298
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 176, 210

Conread position: 5-455
Cow position:
Alignm length: 461
Alignm identity: 298
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 178, 88

Conread position: 6-359
Cow position:
Alignm length: 359
Alignm identity: 235
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 79

Conread position: 6-368
Cow position:
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 68

Conread position: 7-336
Cow position:
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 251

Conread position: 7-359
Cow position:
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 38

Conread position: 7-359
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 0

Conread position: 7-359
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 130, 38

Conread position: 8-252
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 175, 39

Conread position: 8-358
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 175, 33

Conread position: 8-359
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 169

Conread position: 10-453
Cow position:
Alignm length: 455
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 364

Conread position: 16-359
Cow position:
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 204

Conread position: 17-353
Cow position:
Alignm length: 341
Alignm identity: 221
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 25

Conread position: 22-359
Cow position:
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 26-288
Cow position:
Alignm length: 269
Alignm identity: 180
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 121, 96

Conread position: 26-359
Cow position:
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 199

Conread position: 35-355
Cow position:
Alignm length: 326
Alignm identity: 209
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 148, 223

Conread position: 39-349
Cow position:
Alignm length: 329
Alignm identity: 221
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 62, 109

Conread position: 39-359
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 144, 209

Conread position: 46-359
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 33, 102

Conread position: 49-355
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 14

Conread position: 63-288
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 74, 86

Conread position: 72-365
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 111, 203

Conread position: 109-354
Cow position:
Alignm length: 258
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 38

Conread position: 148-359
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.