Cow genome map

Conread name: Ss1.1-Pig4-TMW8054E11.3

Conread position: 1-126
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 1-142
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 194, 83

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 182, 18

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 56

Conread position: 1-213
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 105

Conread position: 1-250
Cow position:
Alignm length: 261
Alignm identity: 175
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 113

Conread position: 1-252
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 123

Conread position: 1-252
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 40

Conread position: 1-252
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 137, 98

Conread position: 1-270
Cow position:
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 245

Conread position: 1-277
Cow position:
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 213, 33

Conread position: 1-285
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 122, 43

Conread position: 1-298
Cow position:
Alignm length: 310
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 117, 278

Conread position: 1-312
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 137, 94

Conread position: 1-322
Cow position:
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 1-324
Cow position:
Alignm length: 330
Alignm identity: 208
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 142

Conread position: 1-324
Cow position:
Alignm length: 329
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 129, 43

Conread position: 1-329
Cow position:
Alignm length: 340
Alignm identity: 223
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 170, 252

Conread position: 1-332
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 135

Conread position: 1-336
Cow position:
Alignm length: 344
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 36

Conread position: 1-336
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 33

Conread position: 1-336
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 210

Conread position: 1-350
Cow position:
Alignm length: 358
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 128, 28

Conread position: 1-351
Cow position:
Alignm length: 360
Alignm identity: 224
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 128, 179

Conread position: 1-353
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 184, 81

Conread position: 1-355
Cow position:
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 182, 82

Conread position: 1-355
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 1-356
Cow position:
Alignm length: 374
Alignm identity: 251
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 128, 101

Conread position: 1-356
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 115

Conread position: 1-359
Cow position:
Alignm length: 368
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 181, 33

Conread position: 1-359
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 117, 218

Conread position: 1-359
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 187, 98

Conread position: 1-359
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 122, 168

Conread position: 1-359
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 142

Conread position: 1-359
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 51

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 182, 16

Conread position: 1-359
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 188, 101

Conread position: 1-359
Cow position:
Alignm length: 368
Alignm identity: 235
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 29

Conread position: 1-361
Cow position:
Alignm length: 374
Alignm identity: 239
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 194, 111

Conread position: 1-362
Cow position:
Alignm length: 368
Alignm identity: 251
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 214, 121

Conread position: 1-366
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 68

Conread position: 1-366
Cow position:
Alignm length: 375
Alignm identity: 244
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 33

Conread position: 1-368
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 213, 111

Conread position: 1-373
Cow position:
Alignm length: 378
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 136, 21

Conread position: 1-441
Cow position:
Alignm length: 444
Alignm identity: 288
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 266, 81

Conread position: 2-222
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 131, 0

Conread position: 2-252
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 193, 127

Conread position: 2-306
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 166, 0

Conread position: 2-350
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 199, 0

Conread position: 2-359
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 98

Conread position: 2-366
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 192, 23

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 183, 42

Conread position: 4-110
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-252
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 179, 117

Conread position: 4-359
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 183, 32

Conread position: 4-361
Cow position:
Alignm length: 365
Alignm identity: 232
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 179, 11

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-119
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-184
Cow position:
Alignm length: 180
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 5-186
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-186
Cow position:
Alignm length: 183
Alignm identity: 126
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 5-186
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 130

Conread position: 5-215
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 178, 204

Conread position: 5-222
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 178, 0

Conread position: 5-234
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 178, 155

Conread position: 5-239
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 178, 224

Conread position: 5-248
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 183, 0

Conread position: 5-248
Cow position:
Alignm length: 249
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 183, 0

Conread position: 5-252
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 178, 0

Conread position: 5-252
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 178, 18

Conread position: 5-252
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 174, 0

Conread position: 5-257
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 181, 60

Conread position: 5-285
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 178, 0

Conread position: 5-297
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 178, 0

Conread position: 5-301
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 178, 107

Conread position: 5-304
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-304
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 178, 0

Conread position: 5-309
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 178, 0

Conread position: 5-316
Cow position:
Alignm length: 318
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 178, 0

Conread position: 5-332
Cow position:
Alignm length: 334
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 178, 0

Conread position: 5-351
Cow position:
Alignm length: 354
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-355
Cow position:
Alignm length: 357
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 178, 63

Conread position: 5-355
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 113, 26

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 271

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 177, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 303

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 178, 94

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 5-359
Cow position:
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 116

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 63

Conread position: 5-359
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 272

Conread position: 5-359
Cow position:
Alignm length: 365
Alignm identity: 222
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 178, 63

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 170

Conread position: 5-359
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 178, 14

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 237

Conread position: 5-359
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 262

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 178, 49

Conread position: 5-359
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 254

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 248
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 178, 95

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position:
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 5-359
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-366
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 118, 97

Conread position: 5-368
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 5-368
Cow position:
Alignm length: 374
Alignm identity: 256
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 18

Conread position: 5-368
Cow position:
Alignm length: 376
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 72

Conread position: 5-368
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 96

Conread position: 5-433
Cow position:
Alignm length: 440
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 271

Conread position: 5-433
Cow position:
Alignm length: 439
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 382

Conread position: 5-442
Cow position:
Alignm length: 453
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 6-354
Cow position:
Alignm length: 373
Alignm identity: 253
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 177, 47

Conread position: 6-359
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 143, 91

Conread position: 7-245
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 179, 146

Conread position: 7-252
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 176, 114

Conread position: 7-359
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 40

Conread position: 7-368
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 10-231
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 80

Conread position: 27-299
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 156, 73

Conread position: 27-357
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 156, 94

Conread position: 36-363
Cow position:
Alignm length: 336
Alignm identity: 210
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 12, 218

Conread position: 42-373
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 60

Conread position: 70-356
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 12

Conread position: 73-359
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 71

Conread position: 73-359
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 95

Conread position: 84-359
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 90-353
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 90-359
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 156

Conread position: 91-365
Cow position:
Alignm length: 283
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 15

Conread position: 107-355
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 60

Show alignments to all cow chromosomes.