Cow genome map

Conread name: Ss1.1-Pig4-TMW8054E11.3

Conread position: 1-120
Cow position: chr6:56842398-56842278 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1-121
Cow position: chr6:2581979-2581859 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-124
Cow position: chr6:61632509-61632386 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-131
Cow position: chr6:58036657-58036528 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 0

Conread position: 1-134
Cow position: chr6:14064321-14064454 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-141
Cow position: chr6:52001127-52000988 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-149
Cow position: chr6:27942205-27942057 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr6:34548409-34548259 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 1-153
Cow position: chr6:37761630-37761480 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 0

Conread position: 1-159
Cow position: chr6:10252580-10252423 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 1-167
Cow position: chr6:50526885-50526721 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 53

Conread position: 1-168
Cow position: chr6:53461803-53461970 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-186
Cow position: chr6:1109384-1109198 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 145, 0

Conread position: 1-186
Cow position: chr6:5096432-5096614 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 100

Conread position: 1-186
Cow position: chr6:19044582-19044406 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 1-186
Cow position: chr6:65941633-65941817 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 144

Conread position: 1-211
Cow position: chr6:9322377-9322166 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 185, 74

Conread position: 1-211
Cow position: chr6:17344575-17344363 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 1-213
Cow position: chr6:44510462-44510251 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 180, 36

Conread position: 1-218
Cow position: chr6:53742296-53742083 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 192, 126

Conread position: 1-225
Cow position: chr6:51674142-51673921 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 185, 76

Conread position: 1-228
Cow position: chr6:7216171-7215941 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 0

Conread position: 1-234
Cow position: chr6:44098081-44097845 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 182, 68

Conread position: 1-245
Cow position: chr6:6278163-6277903 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-248
Cow position: chr6:6471560-6471809 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 148, 74

Conread position: 1-248
Cow position: chr6:21588360-21588108 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 182, 0

Conread position: 1-248
Cow position: chr6:33301044-33300789 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 1-252
Cow position: chr6:64252484-64252235 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 83

Conread position: 1-264
Cow position: chr6:24918249-24918499 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 88

Conread position: 1-270
Cow position: chr6:1274472-1274743 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 68

Conread position: 1-271
Cow position: chr6:29689234-29688966 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 26, 94

Conread position: 1-276
Cow position: chr6:33896266-33896545 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 18

Conread position: 1-282
Cow position: chr6:7176192-7176475 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 90

Conread position: 1-282
Cow position: chr6:48947281-48947565 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 181, 240

Conread position: 1-282
Cow position: chr6:53810957-53810682 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 105, 29

Conread position: 1-282
Cow position: chr6:58595033-58595316 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 182, 83

Conread position: 1-297
Cow position: chr6:25179809-25180107 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 95

Conread position: 1-298
Cow position: chr6:52557275-52557557 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-304
Cow position: chr6:24623767-24624070 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 101

Conread position: 1-305
Cow position: chr6:42988429-42988733 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 95

Conread position: 1-305
Cow position: chr6:59596621-59596308 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 1-319
Cow position: chr6:3119163-3119490 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 152, 33

Conread position: 1-319
Cow position: chr6:6944571-6944887 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 77

Conread position: 1-319
Cow position: chr6:38988449-38988759 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 33

Conread position: 1-320
Cow position: chr6:4274445-4274122 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 101

Conread position: 1-322
Cow position: chr6:35704141-35704472 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 154

Conread position: 1-326
Cow position: chr6:46283723-46284054 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 182, 153

Conread position: 1-335
Cow position: chr6:32286927-32286590 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 144

Conread position: 1-335
Cow position: chr6:43797522-43797871 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 1-335
Cow position: chr6:47614467-47614797 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 165, 89

Conread position: 1-335
Cow position: chr6:62326646-62326310 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 182, 46

Conread position: 1-337
Cow position: chr6:15261628-15261299 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 101

Conread position: 1-339
Cow position: chr6:34236719-34237059 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 191

Conread position: 1-341
Cow position: chr6:18987506-18987171 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 213, 98

Conread position: 1-342
Cow position: chr6:7105158-7105498 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 182, 23

Conread position: 1-342
Cow position: chr6:39136874-39136531 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 25

Conread position: 1-346
Cow position: chr6:15471437-15471785 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 165, 203

Conread position: 1-350
Cow position: chr6:12535095-12534749 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 176, 41

Conread position: 1-350
Cow position: chr6:33949784-33950142 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 41

Conread position: 1-350
Cow position: chr6:46633494-46633140 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 84

Conread position: 1-350
Cow position: chr6:60167187-60167540 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 187, 28

Conread position: 1-353
Cow position: chr6:47381059-47380682 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 105, 0

Conread position: 1-354
Cow position: chr6:4903625-4903971 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 79

Conread position: 1-354
Cow position: chr6:6459487-6459129 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 33, 104

Conread position: 1-355
Cow position: chr6:727253-727606 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 26

Conread position: 1-355
Cow position: chr6:10570513-10570882 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 182, 144

Conread position: 1-355
Cow position: chr6:10650418-10650778 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 165

Conread position: 1-355
Cow position: chr6:34030631-34030301 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 215, 25

Conread position: 1-355
Cow position: chr6:50637644-50637301 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 75, 40

Conread position: 1-356
Cow position: chr6:6119618-6119974 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 33

Conread position: 1-356
Cow position: chr6:14290138-14290482 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 182, 72

Conread position: 1-356
Cow position: chr6:16675055-16674703 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 48

Conread position: 1-356
Cow position: chr6:17556297-17556659 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 142

Conread position: 1-356
Cow position: chr6:47171438-47171095 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 137, 101

Conread position: 1-357
Cow position: chr6:1096354-1096722 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 255
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 40, 107

Conread position: 1-359
Cow position: chr6:529517-529880 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 187, 45

Conread position: 1-359
Cow position: chr6:618788-618426 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 167

Conread position: 1-359
Cow position: chr6:3893262-3893632 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 31

Conread position: 1-359
Cow position: chr6:4467999-4467621 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 214

Conread position: 1-359
Cow position: chr6:9737882-9738243 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 33

Conread position: 1-359
Cow position: chr6:10612206-10611837 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 165, 33

Conread position: 1-359
Cow position: chr6:12926949-12926583 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 123

Conread position: 1-359
Cow position: chr6:14950279-14950642 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 63

Conread position: 1-359
Cow position: chr6:24584022-24584369 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 142

Conread position: 1-359
Cow position: chr6:24631875-24632237 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 33

Conread position: 1-359
Cow position: chr6:25783037-25783419 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 1-359
Cow position: chr6:33508622-33508274 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 10

Conread position: 1-359
Cow position: chr6:35416597-35416950 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 165

Conread position: 1-359
Cow position: chr6:35601054-35600689 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 101

Conread position: 1-359
Cow position: chr6:35825419-35825079 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 136, 99

Conread position: 1-359
Cow position: chr6:49761840-49761473 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 182, 101

Conread position: 1-359
Cow position: chr6:53935262-53935622 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 145, 92

Conread position: 1-359
Cow position: chr6:58880573-58880223 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 33

Conread position: 1-359
Cow position: chr6:64426163-64425802 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 75

Conread position: 1-359
Cow position: chr6:65049310-65049649 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 349, 88

Conread position: 1-362
Cow position: chr6:11638830-11639187 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 100, 88

Conread position: 1-362
Cow position: chr6:15181533-15181173 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 133, 234

Conread position: 1-362
Cow position: chr6:16625156-16624783 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 170

Conread position: 1-362
Cow position: chr6:16703369-16703736 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 28

Conread position: 1-363
Cow position: chr6:27534416-27534798 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 1-363
Cow position: chr6:28481704-28481343 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 135

Conread position: 1-364
Cow position: chr6:58605902-58605533 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 22

Conread position: 1-365
Cow position: chr6:15783616-15783972 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 165

Conread position: 1-365
Cow position: chr6:28549660-28550059 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 1-366
Cow position: chr6:2087899-2087524 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 246
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 188, 0

Conread position: 1-366
Cow position: chr6:2618190-2618560 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 335

Conread position: 1-366
Cow position: chr6:12514865-12514511 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 179, 73

Conread position: 1-366
Cow position: chr6:16766466-16766837 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 122

Conread position: 1-366
Cow position: chr6:22805464-22805838 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 54

Conread position: 1-366
Cow position: chr6:30316569-30316941 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 33

Conread position: 1-366
Cow position: chr6:50624807-50624427 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 146, 121

Conread position: 1-366
Cow position: chr6:52977792-52978156 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 92

Conread position: 1-367
Cow position: chr6:13405596-13405230 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 182, 10

Conread position: 1-369
Cow position: chr6:62000968-62001339 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 182, 142

Conread position: 1-370
Cow position: chr6:27341971-27341601 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 135, 92

Conread position: 1-370
Cow position: chr6:47574166-47573802 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 159

Conread position: 1-370
Cow position: chr6:52249138-52249504 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 1-370
Cow position: chr6:65868160-65867786 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 169, 336

Conread position: 1-373
Cow position: chr6:14897556-14897181 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 137, 101

Conread position: 1-416
Cow position: chr6:37386521-37386104 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 274
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 110, 19

Conread position: 1-444
Cow position: chr6:50114053-50113609 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 44

Conread position: 1-447
Cow position: chr6:49733161-49732720 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 287
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 63

Conread position: 2-247
Cow position: chr6:55386832-55386591 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 181, 72

Conread position: 2-248
Cow position: chr6:14263882-14264130 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 181, 52

Conread position: 2-248
Cow position: chr6:29484352-29484105 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 134, 40

Conread position: 2-294
Cow position: chr6:28156895-28157187 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 69

Conread position: 2-316
Cow position: chr6:16410430-16410115 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 129

Conread position: 2-336
Cow position: chr6:13591686-13591349 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 135, 14

Conread position: 2-341
Cow position: chr6:30491883-30492222 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 223
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 89

Conread position: 2-351
Cow position: chr6:44950083-44950442 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 258

Conread position: 2-355
Cow position: chr6:41556697-41556349 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 36, 86

Conread position: 2-359
Cow position: chr6:6721348-6720981 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 84

Conread position: 2-359
Cow position: chr6:10236566-10236206 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 25

Conread position: 2-361
Cow position: chr6:29085007-29085363 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 181, 98

Conread position: 2-366
Cow position: chr6:14851374-14851743 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 62

Conread position: 2-370
Cow position: chr6:47025433-47025039 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 391

Conread position: 2-370
Cow position: chr6:52189614-52189982 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 134, 67

Conread position: 2-370
Cow position: chr6:55474681-55474306 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 371

Conread position: 2-454
Cow position: chr6:10598376-10597919 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 269
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 181, 102

Conread position: 3-140
Cow position: chr6:64888341-64888205 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 3-193
Cow position: chr6:50801265-50801454 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 71

Conread position: 3-248
Cow position: chr6:27365545-27365300 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 166, 50

Conread position: 3-276
Cow position: chr6:17149793-17150077 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 180, 273

Conread position: 3-304
Cow position: chr6:10681358-10681062 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 183, 99

Conread position: 3-336
Cow position: chr6:10695095-10694748 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 183, 42

Conread position: 3-350
Cow position: chr6:53672707-53672357 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 140

Conread position: 3-355
Cow position: chr6:65847995-65848353 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 34

Conread position: 3-356
Cow position: chr6:39957440-39957089 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 180, 141

Conread position: 3-359
Cow position: chr6:50120556-50120916 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 99

Conread position: 3-370
Cow position: chr6:30076911-30077282 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 180, 60

Conread position: 4-207
Cow position: chr6:12099877-12099681 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 99

Conread position: 4-336
Cow position: chr6:33984190-33983851 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 135

Conread position: 4-362
Cow position: chr6:11353800-11354168 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 108, 168

Conread position: 4-365
Cow position: chr6:34075245-34074872 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 185

Conread position: 5-101
Cow position: chr6:39092989-39092893 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-115
Cow position: chr6:34017350-34017460 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:1245549-1245660 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:8382311-8382200 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:12971768-12971657 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:17773358-17773247 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:20216024-20216135 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:39080289-39080178 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:39897691-39897802 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:42897559-42897448 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:57329650-57329539 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-116
Cow position: chr6:63714904-63715015 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-130
Cow position: chr6:10266755-10266880 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-181
Cow position: chr6:653425-653601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-184
Cow position: chr6:20581404-20581583 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-184
Cow position: chr6:32664730-32664909 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 5-184
Cow position: chr6:48882119-48881940 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 5-186
Cow position: chr6:11389242-11389423 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-186
Cow position: chr6:41233295-41233116 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 5-186
Cow position: chr6:54887221-54887400 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 5-203
Cow position: chr6:3987684-3987885 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 0

Conread position: 5-205
Cow position: chr6:18912362-18912565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 127

Conread position: 5-205
Cow position: chr6:28136123-28135921 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 178, 69

Conread position: 5-211
Cow position: chr6:7448867-7448658 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 178, 0

Conread position: 5-213
Cow position: chr6:2111028-2111238 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 178, 96

Conread position: 5-213
Cow position: chr6:45901620-45901831 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 178, 0

Conread position: 5-213
Cow position: chr6:46225590-46225801 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 113, 127

Conread position: 5-213
Cow position: chr6:55361423-55361634 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 178, 0

Conread position: 5-234
Cow position: chr6:508149-508384 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 5-234
Cow position: chr6:40251427-40251659 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 181, 0

Conread position: 5-248
Cow position: chr6:1402187-1402433 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 178, 160

Conread position: 5-248
Cow position: chr6:1406775-1407021 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 178, 160

Conread position: 5-248
Cow position: chr6:55903461-55903213 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 5-251
Cow position: chr6:43779064-43778827 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 178, 18

Conread position: 5-252
Cow position: chr6:8754083-8754334 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 5-252
Cow position: chr6:45666558-45666807 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 178, 133

Conread position: 5-270
Cow position: chr6:11401692-11401422 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 178, 0

Conread position: 5-270
Cow position: chr6:56926105-56925834 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 5-279
Cow position: chr6:27094215-27094493 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 178, 128

Conread position: 5-279
Cow position: chr6:52065749-52066028 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 0

Conread position: 5-286
Cow position: chr6:16645256-16644982 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 178, 65

Conread position: 5-304
Cow position: chr6:18803687-18803990 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 127

Conread position: 5-304
Cow position: chr6:35873360-35873661 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 178, 32

Conread position: 5-319
Cow position: chr6:28001024-28001339 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 210, 177

Conread position: 5-321
Cow position: chr6:21163675-21163351 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 178, 0

Conread position: 5-322
Cow position: chr6:53537448-53537124 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 178, 0

Conread position: 5-325
Cow position: chr6:1834367-1834041 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 178, 0

Conread position: 5-335
Cow position: chr6:46764034-46764366 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 138

Conread position: 5-337
Cow position: chr6:45736496-45736809 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 305, 148

Conread position: 5-354
Cow position: chr6:15137801-15138158 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 5-354
Cow position: chr6:34273498-34273849 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 131, 72

Conread position: 5-355
Cow position: chr6:11289095-11289445 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 124, 130

Conread position: 5-355
Cow position: chr6:28065362-28065005 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 102

Conread position: 5-355
Cow position: chr6:67553604-67553246 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-356
Cow position: chr6:3272110-3272468 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-356
Cow position: chr6:6557333-6556974 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-356
Cow position: chr6:26324828-26325186 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 5-356
Cow position: chr6:57857142-57856782 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 141

Conread position: 5-359
Cow position: chr6:126763-127122 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 97

Conread position: 5-359
Cow position: chr6:327990-328350 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 330

Conread position: 5-359
Cow position: chr6:843455-843818 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 5-359
Cow position: chr6:888929-888567 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:1796997-1796637 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 160

Conread position: 5-359
Cow position: chr6:2089647-2089293 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 161

Conread position: 5-359
Cow position: chr6:2875662-2876021 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 5-359
Cow position: chr6:3152587-3152228 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 178, 97

Conread position: 5-359
Cow position: chr6:6034426-6034787 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 97

Conread position: 5-359
Cow position: chr6:6568859-6569208 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 178, 236

Conread position: 5-359
Cow position: chr6:7137970-7138330 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 116

Conread position: 5-359
Cow position: chr6:7467279-7467640 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 18

Conread position: 5-359
Cow position: chr6:9234883-9234522 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:10044587-10044225 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 270

Conread position: 5-359
Cow position: chr6:11020030-11019667 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 0

Conread position: 5-359
Cow position: chr6:11168877-11168515 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 184, 14

Conread position: 5-359
Cow position: chr6:11453495-11453858 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 127

Conread position: 5-359
Cow position: chr6:12662943-12663305 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:12997791-12997431 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 88

Conread position: 5-359
Cow position: chr6:13308026-13308386 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 155

Conread position: 5-359
Cow position: chr6:14928823-14928469 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 178, 64

Conread position: 5-359
Cow position: chr6:16049921-16050280 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 5-359
Cow position: chr6:17111794-17112155 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 63

Conread position: 5-359
Cow position: chr6:17386895-17386533 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:19103536-19103898 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:19712873-19713224 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 178, 112

Conread position: 5-359
Cow position: chr6:21712078-21711714 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 5-359
Cow position: chr6:22043637-22043998 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 103

Conread position: 5-359
Cow position: chr6:22737334-22737697 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:23568221-23568583 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 127

Conread position: 5-359
Cow position: chr6:23879685-23880046 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 43

Conread position: 5-359
Cow position: chr6:26667653-26668014 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 12

Conread position: 5-359
Cow position: chr6:26771750-26772111 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 97

Conread position: 5-359
Cow position: chr6:28102498-28102855 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 40

Conread position: 5-359
Cow position: chr6:28184947-28185320 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 156, 164

Conread position: 5-359
Cow position: chr6:31912803-31913165 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:31941239-31940877 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:33809062-33809424 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:36230154-36230516 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:37387938-37387588 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 118

Conread position: 5-359
Cow position: chr6:40278424-40278069 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 178, 14

Conread position: 5-359
Cow position: chr6:43038699-43039057 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 209, 187

Conread position: 5-359
Cow position: chr6:43087232-43087582 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 178, 67

Conread position: 5-359
Cow position: chr6:43621103-43620741 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:44146576-44146937 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 18

Conread position: 5-359
Cow position: chr6:45479716-45480078 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:46948188-46947829 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 97

Conread position: 5-359
Cow position: chr6:47149600-47149959 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 247

Conread position: 5-359
Cow position: chr6:51150314-51149952 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:51868359-51868005 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 30

Conread position: 5-359
Cow position: chr6:53543111-53543473 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:55239062-55238706 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 236

Conread position: 5-359
Cow position: chr6:55593442-55593065 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 182, 0

Conread position: 5-359
Cow position: chr6:56451723-56452085 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:57521547-57521185 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:60379535-60379173 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:61829601-61829239 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 127

Conread position: 5-359
Cow position: chr6:62665147-62664785 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 5-359
Cow position: chr6:63177415-63177053 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-359
Cow position: chr6:65874912-65875270 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 134, 144

Conread position: 5-359
Cow position: chr6:67173928-67173565 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 86

Conread position: 5-359
Cow position: chr6:67448554-67448916 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-363
Cow position: chr6:33466329-33465964 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 178, 78

Conread position: 5-366
Cow position: chr6:34843341-34843710 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-366
Cow position: chr6:36531646-36531276 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-366
Cow position: chr6:40550328-40550696 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-366
Cow position: chr6:50571563-50571194 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-366
Cow position: chr6:55538899-55539268 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-367
Cow position: chr6:27475778-27475414 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 140

Conread position: 5-368
Cow position: chr6:478922-478550 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 5-368
Cow position: chr6:706370-705998 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 228

Conread position: 5-368
Cow position: chr6:1537077-1536705 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:2186410-2186782 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:3886133-3886506 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 244

Conread position: 5-368
Cow position: chr6:5946403-5946775 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:6182348-6182708 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 178, 40

Conread position: 5-368
Cow position: chr6:8205559-8205188 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 148

Conread position: 5-368
Cow position: chr6:11721836-11722196 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 238

Conread position: 5-368
Cow position: chr6:15275868-15276240 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:16593320-16592961 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 209, 43

Conread position: 5-368
Cow position: chr6:17049745-17049370 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:17121761-17121388 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 57

Conread position: 5-368
Cow position: chr6:21857000-21857364 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 178, 113

Conread position: 5-368
Cow position: chr6:24242659-24242290 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 5-368
Cow position: chr6:32420319-32419949 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 16

Conread position: 5-368
Cow position: chr6:34494047-34493675 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:34504149-34504521 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 239

Conread position: 5-368
Cow position: chr6:39331161-39331531 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 5-368
Cow position: chr6:39999087-39999457 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 131

Conread position: 5-368
Cow position: chr6:40813733-40813365 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 65

Conread position: 5-368
Cow position: chr6:41231859-41231488 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 178, 49

Conread position: 5-368
Cow position: chr6:44017456-44017828 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 178, 0

Conread position: 5-368
Cow position: chr6:47039839-47040209 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 29

Conread position: 5-368
Cow position: chr6:50485412-50485773 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 178, 241

Conread position: 5-368
Cow position: chr6:51717926-51717555 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 5-368
Cow position: chr6:51733453-51733082 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 204

Conread position: 5-368
Cow position: chr6:60332716-60332343 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-368
Cow position: chr6:64719688-64719318 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 178, 42

Conread position: 5-369
Cow position: chr6:45937651-45937299 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 178, 116

Conread position: 5-370
Cow position: chr6:28160781-28160409 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 368

Conread position: 5-376
Cow position: chr6:451891-452272 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 5-376
Cow position: chr6:39912694-39912316 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 260

Conread position: 5-416
Cow position: chr6:65819210-65819628 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 113

Conread position: 5-435
Cow position: chr6:45975871-45975438 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 192
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 178, 405

Conread position: 5-438
Cow position: chr6:40863660-40864105 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 50

Conread position: 5-442
Cow position: chr6:30269530-30269974 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 385

Conread position: 6-206
Cow position: chr6:20267945-20268144 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 39

Conread position: 6-233
Cow position: chr6:12388091-12388315 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 176, 96

Conread position: 6-304
Cow position: chr6:25374737-25375040 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 177, 0

Conread position: 6-359
Cow position: chr6:16418311-16418672 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 6-359
Cow position: chr6:42267099-42266749 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 177, 82

Conread position: 6-359
Cow position: chr6:52900317-52899960 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 243
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 177, 241

Conread position: 6-368
Cow position: chr6:3485048-3485418 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 6-368
Cow position: chr6:20552872-20553240 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 250
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 187, 69

Conread position: 6-453
Cow position: chr6:58031148-58030695 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 235

Conread position: 7-110
Cow position: chr6:33451213-33451111 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 7-328
Cow position: chr6:34405671-34405344 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 199

Conread position: 7-359
Cow position: chr6:21832291-21832650 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 176, 265

Conread position: 7-359
Cow position: chr6:38438976-38438616 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 7-359
Cow position: chr6:41677298-41676944 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 27

Conread position: 7-359
Cow position: chr6:68030549-68030189 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 7-366
Cow position: chr6:27526593-27526960 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 0

Conread position: 7-366
Cow position: chr6:28172277-28171914 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 176, 63

Conread position: 7-368
Cow position: chr6:20451329-20450960 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 47

Conread position: 7-444
Cow position: chr6:60876666-60876228 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 238

Conread position: 8-137
Cow position: chr6:48825860-48825989 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-292
Cow position: chr6:65909696-65909408 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 142

Conread position: 8-326
Cow position: chr6:27939403-27939079 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 175, 0

Conread position: 8-359
Cow position: chr6:11869566-11869924 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 28

Conread position: 9-213
Cow position: chr6:57383784-57383577 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 174, 0

Conread position: 9-252
Cow position: chr6:45793101-45792854 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 165, 67

Conread position: 9-370
Cow position: chr6:1498565-1498199 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 7

Conread position: 10-304
Cow position: chr6:24126229-24126519 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 6

Conread position: 10-359
Cow position: chr6:3574153-3573806 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 109

Conread position: 10-359
Cow position: chr6:19441577-19441216 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 112, 79

Conread position: 10-359
Cow position: chr6:63406169-63405822 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 38

Conread position: 11-359
Cow position: chr6:27151075-27151431 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 11-359
Cow position: chr6:41531959-41531590 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 114, 78

Conread position: 13-444
Cow position: chr6:25357503-25357937 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 89

Conread position: 15-359
Cow position: chr6:18962983-18963327 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 82

Conread position: 20-366
Cow position: chr6:41192682-41192329 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 49

Conread position: 24-359
Cow position: chr6:15480917-15480587 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 156, 7

Conread position: 25-354
Cow position: chr6:12629247-12628917 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 190, 12

Conread position: 26-355
Cow position: chr6:1104815-1105136 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 112

Conread position: 26-359
Cow position: chr6:6595773-6595433 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 36

Conread position: 26-359
Cow position: chr6:7112598-7112923 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 165, 10

Conread position: 27-307
Cow position: chr6:49963602-49963888 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 27-359
Cow position: chr6:1507160-1507500 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 156, 0

Conread position: 27-359
Cow position: chr6:66188450-66188790 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 153, 0

Conread position: 31-356
Cow position: chr6:12352187-12351845 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 66, 34

Conread position: 37-248
Cow position: chr6:32018774-32018988 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 204

Conread position: 37-359
Cow position: chr6:8633973-8634294 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 217
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 64

Conread position: 37-359
Cow position: chr6:58016689-58016366 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 197, 162

Conread position: 39-368
Cow position: chr6:33489716-33490054 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 144, 0

Conread position: 49-298
Cow position: chr6:19718913-19718659 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 63-282
Cow position: chr6:28399459-28399682 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 58

Conread position: 63-355
Cow position: chr6:2453160-2452861 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 261

Conread position: 63-368
Cow position: chr6:25790387-25790699 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 123, 0

Conread position: 71-359
Cow position: chr6:18970136-18970425 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 112, 28

Conread position: 71-359
Cow position: chr6:41408710-41408415 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 88

Conread position: 72-359
Cow position: chr6:43048890-43049185 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 72-436
Cow position: chr6:58072973-58072592 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 39, 215

Conread position: 73-359
Cow position: chr6:20350785-20351079 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 91-359
Cow position: chr6:28488292-28488568 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 41

Conread position: 91-359
Cow position: chr6:67211308-67211578 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 16

Conread position: 104-359
Cow position: chr6:35883836-35883582 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 41

Conread position: 107-308
Cow position: chr6:12090702-12090903 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 62

Conread position: 124-359
Cow position: chr6:2581654-2581408 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 22

Conread position: 147-368
Cow position: chr6:8536065-8536295 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 155

Conread position: 155-369
Cow position: chr6:17595063-17595286 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 158-359
Cow position: chr6:28476289-28476081 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 192-369
Cow position: chr6:10266909-10267091 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.