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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055B16.3
        

               
Conread position:
               
113-510
               

               
Cow position:
               
chr13:35718884-35719282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
124-326
               

               
Cow position:
               
chr13:22025467-22025665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
124-561
               

               
Cow position:
               
chr13:20839807-20839372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
124-562
               

               
Cow position:
               
chr13:40491473-40491008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 183
               

               
Conread position:
               
125-562
               

               
Cow position:
               
chr13:43480299-43479853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 33
               

               
Conread position:
               
126-487
               

               
Cow position:
               
chr13:26382994-26383355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
126-494
               

               
Cow position:
               
chr13:54345015-54344653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
126-555
               

               
Cow position:
               
chr13:14927477-14927070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
127-564
               

               
Cow position:
               
chr13:18852312-18851877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
128-392
               

               
Cow position:
               
chr13:11147541-11147276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
129-316
               

               
Cow position:
               
chr13:53308733-53308538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
130-499
               

               
Cow position:
               
chr13:57475180-57475539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
131-563
               

               
Cow position:
               
chr13:6974392-6973952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
133-443
               

               
Cow position:
               
chr13:42092212-42092505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
133-510
               

               
Cow position:
               
chr13:5278958-5279346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
133-564
               

               
Cow position:
               
chr13:18491823-18491396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
134-562
               

               
Cow position:
               
chr13:31581516-31581947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
134-564
               

               
Cow position:
               
chr13:34261462-34261024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
135-510
               

               
Cow position:
               
chr13:15281705-15282080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
135-563
               

               
Cow position:
               
chr13:13321005-13320587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
343, 42
               

               
Conread position:
               
136-415
               

               
Cow position:
               
chr13:1780061-1779781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
136-453
               

               
Cow position:
               
chr13:61166230-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
136-485
               

               
Cow position:
               
chr13:13176877-13176531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr13:13465563-13465904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
136-525
               

               
Cow position:
               
chr13:61990104-61990478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 138
               

               
Conread position:
               
136-530
               

               
Cow position:
               
chr13:23960578-23960965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
136-562
               

               
Cow position:
               
chr13:17021493-17021935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
136-564
               

               
Cow position:
               
chr13:15192666-15193099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
137-429
               

               
Cow position:
               
chr13:60436656-60436936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
137-482
               

               
Cow position:
               
chr13:17622511-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr13:7076483-7076113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 70
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr13:51821665-51822018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
137-561
               

               
Cow position:
               
chr13:18166957-18166524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
137-564
               

               
Cow position:
               
chr13:48251765-48252179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
138-562
               

               
Cow position:
               
chr13:32717650-32718055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
139-357
               

               
Cow position:
               
chr13:25261583-25261798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
139-436
               

               
Cow position:
               
chr13:21155265-21155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr13:8201261-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
139-493
               

               
Cow position:
               
chr13:12574858-12574507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
139-497
               

               
Cow position:
               
chr13:20679571-20679208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
139-503
               

               
Cow position:
               
chr13:18835410-18835067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
139-504
               

               
Cow position:
               
chr13:43184648-43185018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
139-511
               

               
Cow position:
               
chr13:37382035-37381658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
139-530
               

               
Cow position:
               
chr13:2774349-2773962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
139-530
               

               
Cow position:
               
chr13:3315449-3315842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
139-553
               

               
Cow position:
               
chr13:24369809-24369385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
139-558
               

               
Cow position:
               
chr13:26261570-26261997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-561
               

               
Cow position:
               
chr13:12670221-12670660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
139-561
               

               
Cow position:
               
chr13:61976741-61977166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr13:10924682-10925132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr13:44323127-44322683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr13:60966988-60966570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr13:4664637-4665060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr13:34995102-34995522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
139-564
               

               
Cow position:
               
chr13:25695544-25695978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-564
               

               
Cow position:
               
chr13:47963977-47964383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
140-349
               

               
Cow position:
               
chr13:60690498-60690710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
140-392
               

               
Cow position:
               
chr13:20041737-20041997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
140-562
               

               
Cow position:
               
chr13:17745463-17745049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
141-497
               

               
Cow position:
               
chr13:30798944-30798592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
141-530
               

               
Cow position:
               
chr13:45022986-45023376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr13:15872670-15872228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr13:20880705-20881130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr13:21235461-21235877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr13:37592715-37593155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
142-405
               

               
Cow position:
               
chr13:5752202-5752470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
142-417
               

               
Cow position:
               
chr13:20683167-20682899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
142-436
               

               
Cow position:
               
chr13:30026334-30026038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
142-487
               

               
Cow position:
               
chr13:15974832-15974496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
142-509
               

               
Cow position:
               
chr13:8524400-8524756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
142-510
               

               
Cow position:
               
chr13:18172562-18172192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
142-556
               

               
Cow position:
               
chr13:17347029-17346626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
142-559
               

               
Cow position:
               
chr13:59687657-59688069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
143-325
               

               
Cow position:
               
chr13:51856416-51856606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr13:20536721-20536531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
143-352
               

               
Cow position:
               
chr13:15172186-15172397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
143-389
               

               
Cow position:
               
chr13:562917-563167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
143-392
               

               
Cow position:
               
chr13:3003668-3003402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
35, 131
               

               
Conread position:
               
143-395
               

               
Cow position:
               
chr13:25248923-25249188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr13:54093961-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr13:5091440-5091702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
143-406
               

               
Cow position:
               
chr13:47216031-47216300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
143-407
               

               
Cow position:
               
chr13:1011553-1011291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-415
               

               
Cow position:
               
chr13:5658510-5658774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
143-439
               

               
Cow position:
               
chr13:24376711-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
143-468
               

               
Cow position:
               
chr13:18244077-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
143-473
               

               
Cow position:
               
chr13:19138658-19138334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
143-474
               

               
Cow position:
               
chr13:25531567-25531897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:37617545-37617208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:52879633-52879290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
143-483
               

               
Cow position:
               
chr13:34556112-34556430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr13:889958-890293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr13:3015947-3016302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr13:47756595-47756235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr13:54080584-54080943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
143-501
               

               
Cow position:
               
chr13:43762386-43762034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
143-502
               

               
Cow position:
               
chr13:23856436-23856075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 129
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr13:38283763-38284117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr13:17439545-17439912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr13:25547372-25547728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr13:36771204-36771565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr13:55673984-55674352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
143-523
               

               
Cow position:
               
chr13:43868897-43869270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
143-524
               

               
Cow position:
               
chr13:18989926-18989564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
143-550
               

               
Cow position:
               
chr13:1042735-1043148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 120
               

               
Conread position:
               
143-555
               

               
Cow position:
               
chr13:12207264-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
143-558
               

               
Cow position:
               
chr13:24754105-24753688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr13:15446267-15445842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr13:20378116-20378525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr13:33054174-33054580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr13:8362525-8362955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr13:9246935-9246540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr13:15041251-15041683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:311651-311223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:5263065-5263488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 97
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:6079198-6079612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:19033768-19033346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:21241871-21242285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:21276076-21275647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:42860350-42860776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr13:57002952-57002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr13:10845814-10845408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr13:19393508-19393086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr13:44202210-44201799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr13:26479993-26480414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr13:44278575-44278135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr13:51528225-51528649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
144-325
               

               
Cow position:
               
chr13:16292766-16292586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
144-326
               

               
Cow position:
               
chr13:18551668-18551488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
144-326
               

               
Cow position:
               
chr13:24539716-24539535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
144-342
               

               
Cow position:
               
chr13:38485051-38484859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr13:54237566-54237336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr13:9884988-9884748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr13:34052381-34052616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
144-403
               

               
Cow position:
               
chr13:61170495-61170754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
144-411
               

               
Cow position:
               
chr13:55295405-55295666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
144-419
               

               
Cow position:
               
chr13:16270155-16269883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
144-422
               

               
Cow position:
               
chr13:33517704-33517978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
144-427
               

               
Cow position:
               
chr13:13306326-13306032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
144-431
               

               
Cow position:
               
chr13:16024809-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
144-439
               

               
Cow position:
               
chr13:41253835-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 64
               

               
Conread position:
               
144-443
               

               
Cow position:
               
chr13:21039378-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-457
               

               
Cow position:
               
chr13:17613566-17613250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-457
               

               
Cow position:
               
chr13:40652153-40651844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
144-458
               

               
Cow position:
               
chr13:61047426-61047123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
144-459
               

               
Cow position:
               
chr13:54381714-54382012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:30651395-30651095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:32949783-32950085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:33875882-33875582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:44626600-44626276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:58043849-58043535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr13:60599722-60600024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
144-462
               

               
Cow position:
               
chr13:11954893-11955212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
144-472
               

               
Cow position:
               
chr13:20814060-20814375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
144-472
               

               
Cow position:
               
chr13:20816533-20816218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr13:20563217-20562873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
144-494
               

               
Cow position:
               
chr13:5713514-5713187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
144-494
               

               
Cow position:
               
chr13:15884793-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
32, 132
               

               
Conread position:
               
144-494
               

               
Cow position:
               
chr13:17970814-17971157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
144-494
               

               
Cow position:
               
chr13:60429858-60430206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr13:50690171-50690527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr13:52285036-52284686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
144-498
               

               
Cow position:
               
chr13:20649763-20650114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-501
               

               
Cow position:
               
chr13:38277917-38278282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr13:55315969-55316334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr13:8609327-8609685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr13:42229548-42229175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr13:56148760-56148383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr13:56160207-56160584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
144-530
               

               
Cow position:
               
chr13:20270995-20271387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
144-544
               

               
Cow position:
               
chr13:60508896-60509312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
144-546
               

               
Cow position:
               
chr13:11096392-11096002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
144-552
               

               
Cow position:
               
chr13:49805195-49804789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
144-556
               

               
Cow position:
               
chr13:21708401-21708001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-561
               

               
Cow position:
               
chr13:17114160-17114589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:7059695-7059249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 136
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:9587363-9587791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:12926011-12925587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 181
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:23667482-23667048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:32017302-32017725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:37985530-37985957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:40722490-40722893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:42200839-42200411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr13:54702410-54701972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
144-563
               

               
Cow position:
               
chr13:25927012-25926578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
144-564
               

               
Cow position:
               
chr13:7010690-7010282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
14, 131
               

               
Conread position:
               
144-564
               

               
Cow position:
               
chr13:41806996-41806565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
145-431
               

               
Cow position:
               
chr13:2463008-2463299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
145-460
               

               
Cow position:
               
chr13:52284129-52283819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
145-468
               

               
Cow position:
               
chr13:4208594-4208914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
145-472
               

               
Cow position:
               
chr13:52227882-52228205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
145-561
               

               
Cow position:
               
chr13:24715460-24715041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
145-562
               

               
Cow position:
               
chr13:15945721-15945284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
145-562
               

               
Cow position:
               
chr13:47502502-47502900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
145-563
               

               
Cow position:
               
chr13:23269995-23270392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
146-503
               

               
Cow position:
               
chr13:37804096-37803754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
146-564
               

               
Cow position:
               
chr13:13501401-13501822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
147-324
               

               
Cow position:
               
chr13:15740287-15740109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 128
               

               
Conread position:
               
147-338
               

               
Cow position:
               
chr13:27027551-27027747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
147-383
               

               
Cow position:
               
chr13:20530924-20531167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
147-390
               

               
Cow position:
               
chr13:6975573-6975820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
147-448
               

               
Cow position:
               
chr13:6835593-6835876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
147-459
               

               
Cow position:
               
chr13:12977780-12977483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
147-497
               

               
Cow position:
               
chr13:11460842-11460502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
147-500
               

               
Cow position:
               
chr13:60974295-60973946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
147-501
               

               
Cow position:
               
chr13:37981535-37981878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
147-503
               

               
Cow position:
               
chr13:20666169-20666523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr13:9142501-9142143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
147-509
               

               
Cow position:
               
chr13:15349053-15349388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
29, 47
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr13:12546688-12547054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr13:13261225-13260860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr13:17977546-17977210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr13:20705985-20706349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
147-517
               

               
Cow position:
               
chr13:971680-972050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
147-539
               

               
Cow position:
               
chr13:1231869-1231459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
147-549
               

               
Cow position:
               
chr13:46182006-46181609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
147-552
               

               
Cow position:
               
chr13:38012578-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
147-555
               

               
Cow position:
               
chr13:15869336-15868907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
147-558
               

               
Cow position:
               
chr13:12283055-12282632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
147-560
               

               
Cow position:
               
chr13:17821042-17821465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
147-560
               

               
Cow position:
               
chr13:22115921-22115468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
147-561
               

               
Cow position:
               
chr13:14544339-14543927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:10988854-10989283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:20879618-20880034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:25537858-25537428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:27525044-27525468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:35659970-35659545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:38329847-38329409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:46516285-46515850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:51940948-51940537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr13:52894361-52893939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
147-563
               

               
Cow position:
               
chr13:25434912-25435316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr13:4038097-4037711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr13:9974851-9975279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
148-391
               

               
Cow position:
               
chr13:51108706-51108465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
148-483
               

               
Cow position:
               
chr13:15167039-15166701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
148-510
               

               
Cow position:
               
chr13:24230427-24230067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
148-510
               

               
Cow position:
               
chr13:40943464-40943097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
148-540
               

               
Cow position:
               
chr13:32535871-32535489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
148-558
               

               
Cow position:
               
chr13:2192924-2192532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
148-562
               

               
Cow position:
               
chr13:14063307-14063730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
149-464
               

               
Cow position:
               
chr13:53195077-53195378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
149-497
               

               
Cow position:
               
chr13:12408069-12408418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
149-562
               

               
Cow position:
               
chr13:152166-151761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
150-483
               

               
Cow position:
               
chr13:51014966-51015294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
152-458
               

               
Cow position:
               
chr13:25062621-25062322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
153-562
               

               
Cow position:
               
chr13:47007526-47007922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
154-390
               

               
Cow position:
               
chr13:37946006-37946231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
154-448
               

               
Cow position:
               
chr13:60341024-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
154-457
               

               
Cow position:
               
chr13:34941446-34941740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr13:1155498-1155796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr13:2884263-2883968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr13:45604208-45604509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr13:52637492-52637208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 71
               

               
Conread position:
               
154-485
               

               
Cow position:
               
chr13:6060797-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
154-492
               

               
Cow position:
               
chr13:11061197-11060861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
154-494
               

               
Cow position:
               
chr13:31814077-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
154-500
               

               
Cow position:
               
chr13:16015017-16014677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
154-501
               

               
Cow position:
               
chr13:10928780-10929123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
154-503
               

               
Cow position:
               
chr13:6616538-6616896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
154-504
               

               
Cow position:
               
chr13:2414236-2413891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
154-509
               

               
Cow position:
               
chr13:37521522-37521887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
154-510
               

               
Cow position:
               
chr13:23166886-23167245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr13:12448779-12449190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr13:20784798-20784385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr13:32283337-32282917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr13:42114231-42113806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
154-564
               

               
Cow position:
               
chr13:34281890-34281470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
155-520
               

               
Cow position:
               
chr13:20088489-20088870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
157-460
               

               
Cow position:
               
chr13:12045126-12045431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 115
               

               
Conread position:
               
157-504
               

               
Cow position:
               
chr13:52585813-52586176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
157-563
               

               
Cow position:
               
chr13:17291923-17292338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
157-563
               

               
Cow position:
               
chr13:48598111-48597699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
157-564
               

               
Cow position:
               
chr13:56686634-56686232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
158-501
               

               
Cow position:
               
chr13:9643676-9644015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
158-556
               

               
Cow position:
               
chr13:46112173-46111765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
158-564
               

               
Cow position:
               
chr13:4553005-4552615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
159-489
               

               
Cow position:
               
chr13:6153574-6153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
159-496
               

               
Cow position:
               
chr13:46311830-46312142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
160-491
               

               
Cow position:
               
chr13:62247335-62247012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
160-502
               

               
Cow position:
               
chr13:9593711-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
160-504
               

               
Cow position:
               
chr13:19223853-19223517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 109
               

               
Conread position:
               
160-529
               

               
Cow position:
               
chr13:59170861-59170492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
160-562
               

               
Cow position:
               
chr13:8245128-8245523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 119
               

               
Conread position:
               
160-562
               

               
Cow position:
               
chr13:9125877-9125480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
160-562
               

               
Cow position:
               
chr13:54095010-54094618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
161-478
               

               
Cow position:
               
chr13:18329334-18329015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
162-440
               

               
Cow position:
               
chr13:53536103-53536381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
163-460
               

               
Cow position:
               
chr13:61188736-61188440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
164-562
               

               
Cow position:
               
chr13:37775027-37775415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
169-420
               

               
Cow position:
               
chr13:62474606-62474852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
171-392
               

               
Cow position:
               
chr13:50546043-50545822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr13:28140351-28140625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 95
               

               
Conread position:
               
174-478
               

               
Cow position:
               
chr13:8635768-8635465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
174-478
               

               
Cow position:
               
chr13:35761376-35761674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
174-485
               

               
Cow position:
               
chr13:15528840-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
175-449
               

               
Cow position:
               
chr13:14301405-14301132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
175-492
               

               
Cow position:
               
chr13:55583386-55583071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr13:15991035-15991368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
175-510
               

               
Cow position:
               
chr13:2404930-2404618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
175-555
               

               
Cow position:
               
chr13:21283519-21283889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 96
               

               
Conread position:
               
175-562
               

               
Cow position:
               
chr13:15958808-15958413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
175-563
               

               
Cow position:
               
chr13:16343874-16343500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
149, 13
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr13:26369712-26369380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
176-510
               

               
Cow position:
               
chr13:14771647-14771308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
177-440
               

               
Cow position:
               
chr13:12618924-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
177-460
               

               
Cow position:
               
chr13:17338619-17338336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
177-563
               

               
Cow position:
               
chr13:47186409-47186020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
178-510
               

               
Cow position:
               
chr13:43919073-43919404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
179-530
               

               
Cow position:
               
chr13:11644116-11643774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
180-562
               

               
Cow position:
               
chr13:49022688-49023075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
180-564
               

               
Cow position:
               
chr13:52055414-52055804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
183-507
               

               
Cow position:
               
chr13:20231021-20231331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
184-418
               

               
Cow position:
               
chr13:966255-966037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
184-510
               

               
Cow position:
               
chr13:5082832-5082505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
184-562
               

               
Cow position:
               
chr13:5758167-5758541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
184-564
               

               
Cow position:
               
chr13:17158693-17159093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
187-472
               

               
Cow position:
               
chr13:7488718-7488436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
188-325
               

               
Cow position:
               
chr13:15947807-15947672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
188-483
               

               
Cow position:
               
chr13:15110498-15110198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
188-504
               

               
Cow position:
               
chr13:12875795-12876110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
190-563
               

               
Cow position:
               
chr13:9665241-9664872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
190-563
               

               
Cow position:
               
chr13:15621995-15621599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 5
               

               
Conread position:
               
192-521
               

               
Cow position:
               
chr13:23651605-23651288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
193-562
               

               
Cow position:
               
chr13:54583051-54582665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
194-421
               

               
Cow position:
               
chr13:14870700-14870478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 7
               

               
Conread position:
               
194-539
               

               
Cow position:
               
chr13:28689638-28689295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
130, 57
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr13:12291434-12291657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr13:607096-607351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr13:13954223-13954486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
197-473
               

               
Cow position:
               
chr13:22912854-22912581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-510
               

               
Cow position:
               
chr13:9265664-9265970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
197-510
               

               
Cow position:
               
chr13:14016400-14016705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-516
               

               
Cow position:
               
chr13:45726057-45725737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr13:20473522-20473882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
197-562
               

               
Cow position:
               
chr13:19188469-19188105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
198-562
               

               
Cow position:
               
chr13:17498395-17498012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
199-562
               

               
Cow position:
               
chr13:49824190-49823814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
200-371
               

               
Cow position:
               
chr13:21904833-21904657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
200-562
               

               
Cow position:
               
chr13:45594068-45593714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 7
               

               
Conread position:
               
201-392
               

               
Cow position:
               
chr13:19013664-19013474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 34
               

               
Conread position:
               
201-564
               

               
Cow position:
               
chr13:49507685-49508042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
202-561
               

               
Cow position:
               
chr13:13339024-13338650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
202-562
               

               
Cow position:
               
chr13:867288-866922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
203-493
               

               
Cow position:
               
chr13:25496169-25495877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
204-460
               

               
Cow position:
               
chr13:39232677-39232918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 21
               

               
Conread position:
               
204-562
               

               
Cow position:
               
chr13:25604464-25604814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
207-561
               

               
Cow position:
               
chr13:6931074-6930715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr13:20853721-20853914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
209-406
               

               
Cow position:
               
chr13:61162806-61162602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
209-479
               

               
Cow position:
               
chr13:6849087-6848814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chr13:7663267-7663546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
209-557
               

               
Cow position:
               
chr13:26847662-26848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
209-564
               

               
Cow position:
               
chr13:15195047-15195412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
210-382
               

               
Cow position:
               
chr13:36346127-36345954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chr13:22030244-22030071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr13:16833916-16834111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr13:7790170-7789964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chr13:34375426-34375185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
210-490
               

               
Cow position:
               
chr13:8652282-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
210-495
               

               
Cow position:
               
chr13:27493695-27493985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
210-504
               

               
Cow position:
               
chr13:9900305-9900021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
210-510
               

               
Cow position:
               
chr13:4420503-4420186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
210-555
               

               
Cow position:
               
chr13:20893483-20893846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 29
               

               
Conread position:
               
210-560
               

               
Cow position:
               
chr13:20157884-20157522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr13:16247811-16247435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr13:19581931-19582290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr13:28139722-28139372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
211-397
               

               
Cow position:
               
chr13:41154877-41155067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
212-564
               

               
Cow position:
               
chr13:38698205-38697846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
214-492
               

               
Cow position:
               
chr13:37640738-37640464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
215-334
               

               
Cow position:
               
chr13:20264760-20264882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
215-429
               

               
Cow position:
               
chr13:37979025-37979223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr13:46736364-46736077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
215-555
               

               
Cow position:
               
chr13:18999693-18999329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
215-557
               

               
Cow position:
               
chr13:9800654-9800317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr13:29831282-29831634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
215-563
               

               
Cow position:
               
chr13:47188594-47188251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr13:20128815-20128602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
217-504
               

               
Cow position:
               
chr13:39368104-39367821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
217-514
               

               
Cow position:
               
chr13:43829401-43829095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
217-562
               

               
Cow position:
               
chr13:20174899-20174528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
218-437
               

               
Cow position:
               
chr13:53070022-53070230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
218-539
               

               
Cow position:
               
chr13:13238725-13238403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
218-557
               

               
Cow position:
               
chr13:6441952-6442311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
218-562
               

               
Cow position:
               
chr13:2823007-2822658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
219-406
               

               
Cow position:
               
chr13:16711777-16711588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
219-460
               

               
Cow position:
               
chr13:1363841-1363601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 50
               

               
Conread position:
               
219-550
               

               
Cow position:
               
chr13:54388874-54389215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
219-556
               

               
Cow position:
               
chr13:26698350-26698700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
219-562
               

               
Cow position:
               
chr13:17568952-17569306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
219-562
               

               
Cow position:
               
chr13:20180564-20180224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
220-391
               

               
Cow position:
               
chr13:13809406-13809589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
220-408
               

               
Cow position:
               
chr13:28696227-28696044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
221-562
               

               
Cow position:
               
chr13:3160535-3160193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 6
               

               
Conread position:
               
222-493
               

               
Cow position:
               
chr13:37946809-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
222-497
               

               
Cow position:
               
chr13:38548724-38548461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
222-562
               

               
Cow position:
               
chr13:8374628-8374970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
222-564
               

               
Cow position:
               
chr13:52749337-52749674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 14
               

               
Conread position:
               
223-457
               

               
Cow position:
               
chr13:52929852-52929621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
223-496
               

               
Cow position:
               
chr13:8555606-8555335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
223-557
               

               
Cow position:
               
chr13:20360413-20360071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr13:23512510-23512173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
223-562
               

               
Cow position:
               
chr13:6540163-6540510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
223-562
               

               
Cow position:
               
chr13:28552739-28552377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
224-495
               

               
Cow position:
               
chr13:49520680-49520951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
224-561
               

               
Cow position:
               
chr13:44003861-44003491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 12
               

               
Conread position:
               
224-562
               

               
Cow position:
               
chr13:18058107-18058456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
225-563
               

               
Cow position:
               
chr13:11260405-11260067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
226-460
               

               
Cow position:
               
chr13:21269440-21269675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
227-347
               

               
Cow position:
               
chr13:56275131-56275256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
227-347
               

               
Cow position:
               
chr13:56276384-56276257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
227-400
               

               
Cow position:
               
chr13:29958817-29958652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
227-554
               

               
Cow position:
               
chr13:18929667-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
227-564
               

               
Cow position:
               
chr13:11321477-11321811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
230-562
               

               
Cow position:
               
chr13:5910762-5911100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
231-562
               

               
Cow position:
               
chr13:5060878-5060529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
233-564
               

               
Cow position:
               
chr13:2803601-2803275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
235-563
               

               
Cow position:
               
chr13:20217259-20217608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr13:6389508-6389250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
236-514
               

               
Cow position:
               
chr13:11591874-11591605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
236-560
               

               
Cow position:
               
chr13:58763504-58763816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
270, 24
               

               
Conread position:
               
236-561
               

               
Cow position:
               
chr13:14878824-14879163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
236-561
               

               
Cow position:
               
chr13:25579059-25579398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
238-562
               

               
Cow position:
               
chr13:17437742-17438071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
239-385
               

               
Cow position:
               
chr13:6113174-6113324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
239-457
               

               
Cow position:
               
chr13:25381087-25380873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
239-460
               

               
Cow position:
               
chr13:18973314-18973539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
239-564
               

               
Cow position:
               
chr13:11202157-11201827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
240-504
               

               
Cow position:
               
chr13:39826677-39826419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
240-564
               

               
Cow position:
               
chr13:21280363-21280712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
241-467
               

               
Cow position:
               
chr13:50713325-50713110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
244-458
               

               
Cow position:
               
chr13:16123345-16123546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
244-562
               

               
Cow position:
               
chr13:54128466-54128807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
33, 154
               

               
Conread position:
               
244-563
               

               
Cow position:
               
chr13:20248629-20248311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
245-510
               

               
Cow position:
               
chr13:18995247-18994980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
245-544
               

               
Cow position:
               
chr13:21668807-21668526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
156, 25
               

               
Conread position:
               
245-562
               

               
Cow position:
               
chr13:14576325-14576006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
246-460
               

               
Cow position:
               
chr13:27550857-27550646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
246-562
               

               
Cow position:
               
chr13:11821277-11820951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
247-389
               

               
Cow position:
               
chr13:55947891-55947749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
248-562
               

               
Cow position:
               
chr13:20357777-20358095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
249-554
               

               
Cow position:
               
chr13:8667734-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 82
               

               
Conread position:
               
251-563
               

               
Cow position:
               
chr13:47322291-47322602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
253-554
               

               
Cow position:
               
chr13:49476199-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
253-562
               

               
Cow position:
               
chr13:10221060-10220748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
224, 25
               

               
Conread position:
               
253-562
               

               
Cow position:
               
chr13:34532818-34533138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
224, 0
               

               
Conread position:
               
253-564
               

               
Cow position:
               
chr13:16038172-16038494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
259-563
               

               
Cow position:
               
chr13:20534992-20534690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
261-472
               

               
Cow position:
               
chr13:60389379-60389593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
261-554
               

               
Cow position:
               
chr13:19240544-19240238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 201
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr13:1569032-1568724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 130
               

               
Conread position:
               
261-564
               

               
Cow position:
               
chr13:620152-620459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
263-511
               

               
Cow position:
               
chr13:54286639-54286868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
265-489
               

               
Cow position:
               
chr13:20331325-20331094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
265-562
               

               
Cow position:
               
chr13:49457776-49457493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
267-497
               

               
Cow position:
               
chr13:7332897-7333138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
267-510
               

               
Cow position:
               
chr13:21135797-21136049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
267-562
               

               
Cow position:
               
chr13:7265022-7265315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
268-563
               

               
Cow position:
               
chr13:13196344-13196031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 124
               

               
Conread position:
               
270-480
               

               
Cow position:
               
chr13:15659376-15659166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
270-492
               

               
Cow position:
               
chr13:55728000-55727776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
270-510
               

               
Cow position:
               
chr13:7312599-7312852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
270-561
               

               
Cow position:
               
chr13:56678114-56677832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr13:30258946-30258639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
272-475
               

               
Cow position:
               
chr13:26512610-26512821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 111
               

               
Conread position:
               
272-537
               

               
Cow position:
               
chr13:31344131-31344380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
275-562
               

               
Cow position:
               
chr13:56034764-56035066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
277-468
               

               
Cow position:
               
chr13:16187805-16187997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
278-510
               

               
Cow position:
               
chr13:53330363-53330128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
278-554
               

               
Cow position:
               
chr13:50750962-50751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
278-563
               

               
Cow position:
               
chr13:46329512-46329813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
279-498
               

               
Cow position:
               
chr13:51901683-51901452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
279-504
               

               
Cow position:
               
chr13:3211642-3211411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
279-510
               

               
Cow position:
               
chr13:3989294-3989060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
279-555
               

               
Cow position:
               
chr13:20137915-20137615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 126
               

               
Conread position:
               
279-562
               

               
Cow position:
               
chr13:52477555-52477854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
280-439
               

               
Cow position:
               
chr13:15964408-15964244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
280-498
               

               
Cow position:
               
chr13:17110309-17110095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
282-510
               

               
Cow position:
               
chr13:185619-185386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
43, 133
               

               
Conread position:
               
283-499
               

               
Cow position:
               
chr13:18005759-18005540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
285-460
               

               
Cow position:
               
chr13:26120278-26120452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
285-530
               

               
Cow position:
               
chr13:43893243-43893487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
285-560
               

               
Cow position:
               
chr13:17822869-17823157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 5
               

               
Conread position:
               
286-495
               

               
Cow position:
               
chr13:19892146-19892360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
287-563
               

               
Cow position:
               
chr13:49796099-49795828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
288-490
               

               
Cow position:
               
chr13:51227661-51227865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
289-562
               

               
Cow position:
               
chr13:62008193-62007898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr13:18299480-18299272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
293-552
               

               
Cow position:
               
chr13:19778772-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
35, 75
               

               
Conread position:
               
293-562
               

               
Cow position:
               
chr13:7149305-7149028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 211
               

               
Conread position:
               
293-564
               

               
Cow position:
               
chr13:45073180-45073457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr13:20288726-20288498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
295-538
               

               
Cow position:
               
chr13:7191051-7190785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 176
               

               
Conread position:
               
296-501
               

               
Cow position:
               
chr13:827316-827111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
296-561
               

               
Cow position:
               
chr13:21170604-21170320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
296-562
               

               
Cow position:
               
chr13:6980982-6980716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
297-562
               

               
Cow position:
               
chr13:20115324-20115035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
299-504
               

               
Cow position:
               
chr13:5006063-5005862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
300-530
               

               
Cow position:
               
chr13:42672352-42672583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
301-509
               

               
Cow position:
               
chr13:55162280-55162069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
301-563
               

               
Cow position:
               
chr13:6861251-6860965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
302-504
               

               
Cow position:
               
chr13:17563804-17563602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
302-562
               

               
Cow position:
               
chr13:8233059-8232809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
303-520
               

               
Cow position:
               
chr13:1147090-1147302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
306-556
               

               
Cow position:
               
chr13:11434516-11434777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
308-504
               

               
Cow position:
               
chr13:17838011-17837811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
309-563
               

               
Cow position:
               
chr13:12673238-12673498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
311-494
               

               
Cow position:
               
chr13:25428169-25428351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
311-560
               

               
Cow position:
               
chr13:18197548-18197815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
312-468
               

               
Cow position:
               
chr13:8369215-8369065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
313-510
               

               
Cow position:
               
chr13:41157458-41157261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr13:40154681-40154886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
317-516
               

               
Cow position:
               
chr13:21295121-21294924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
318-522
               

               
Cow position:
               
chr13:9117522-9117721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
320-482
               

               
Cow position:
               
chr13:60393829-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
322-561
               

               
Cow position:
               
chr13:28440491-28440741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
322-562
               

               
Cow position:
               
chr13:21866584-21866841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 28
               

               
Conread position:
               
323-436
               

               
Cow position:
               
chr13:7097970-7097862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
323-473
               

               
Cow position:
               
chr13:19183909-19183762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
323-481
               

               
Cow position:
               
chr13:15985053-15984894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
323-497
               

               
Cow position:
               
chr13:51856843-51857016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr13:17350396-17350219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
31, 70
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr13:6342045-6342226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr13:34873633-34873451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 6
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr13:1733089-1733276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr13:24110529-24110336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
323-511
               

               
Cow position:
               
chr13:52640907-52641093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
154, 30
               

               
Conread position:
               
323-528
               

               
Cow position:
               
chr13:37503538-37503746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr13:25970037-25969803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
323-560
               

               
Cow position:
               
chr13:584829-585081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
323-561
               

               
Cow position:
               
chr13:25561646-25561422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
323-564
               

               
Cow position:
               
chr13:7149470-7149710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 63
               

               
Conread position:
               
323-564
               

               
Cow position:
               
chr13:16020895-16020648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
324-561
               

               
Cow position:
               
chr13:52459440-52459681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
327-562
               

               
Cow position:
               
chr13:21012981-21012756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr13:55765148-55765387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
331-564
               

               
Cow position:
               
chr13:28439444-28439205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
332-562
               

               
Cow position:
               
chr13:40541072-40541318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
334-486
               

               
Cow position:
               
chr13:3125826-3125681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
335-564
               

               
Cow position:
               
chr13:32657411-32657189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
336-563
               

               
Cow position:
               
chr13:15083688-15083454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
338-562
               

               
Cow position:
               
chr13:15069983-15069763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
339-552
               

               
Cow position:
               
chr13:6465663-6465882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 51
               

               
Conread position:
               
339-560
               

               
Cow position:
               
chr13:9161950-9161727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
339-563
               

               
Cow position:
               
chr13:55494500-55494729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
139, 50
               

               
Conread position:
               
340-496
               

               
Cow position:
               
chr13:25450459-25450615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
342-562
               

               
Cow position:
               
chr13:15993409-15993174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 37
               

               
Conread position:
               
345-510
               

               
Cow position:
               
chr13:19750736-19750571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
346-562
               

               
Cow position:
               
chr13:47675917-47676146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
347-561
               

               
Cow position:
               
chr13:52934444-52934220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 8
               

               
Conread position:
               
347-562
               

               
Cow position:
               
chr13:2776304-2776075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
348-469
               

               
Cow position:
               
chr13:40493938-40493821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
348-501
               

               
Cow position:
               
chr13:6183404-6183555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
348-504
               

               
Cow position:
               
chr13:26889238-26889084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
349-561
               

               
Cow position:
               
chr13:55081159-55080930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
350-475
               

               
Cow position:
               
chr13:15739704-15739585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
350-555
               

               
Cow position:
               
chr13:18340548-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
351-497
               

               
Cow position:
               
chr13:50457872-50457727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
351-510
               

               
Cow position:
               
chr13:42640396-42640242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
351-510
               

               
Cow position:
               
chr13:51813922-51814076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
351-530
               

               
Cow position:
               
chr13:13775230-13775406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
351-562
               

               
Cow position:
               
chr13:15997048-15996827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
351-562
               

               
Cow position:
               
chr13:21980962-21981179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr13:47193392-47193220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
354-562
               

               
Cow position:
               
chr13:17089509-17089722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
140, 54
               

               
Conread position:
               
358-560
               

               
Cow position:
               
chr13:10210652-10210860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
359-486
               

               
Cow position:
               
chr13:18517051-18516926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
359-510
               

               
Cow position:
               
chr13:6926523-6926372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
359-560
               

               
Cow position:
               
chr13:7104660-7104451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
359-562
               

               
Cow position:
               
chr13:49356043-49356258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
359-563
               

               
Cow position:
               
chr13:15143837-15144041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
359-563
               

               
Cow position:
               
chr13:16908223-16908003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
359-563
               

               
Cow position:
               
chr13:20520067-20519861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
359-563
               

               
Cow position:
               
chr13:33974739-33974536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
359-564
               

               
Cow position:
               
chr13:6486245-6486464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
359-564
               

               
Cow position:
               
chr13:47243549-47243763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
360-503
               

               
Cow position:
               
chr13:39398658-39398514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
360-504
               

               
Cow position:
               
chr13:36666269-36666412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
360-562
               

               
Cow position:
               
chr13:25941258-25941471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
361-560
               

               
Cow position:
               
chr13:10522937-10522732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
361-562
               

               
Cow position:
               
chr13:8699733-8699952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
361-562
               

               
Cow position:
               
chr13:17813475-17813262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
362-560
               

               
Cow position:
               
chr13:52536568-52536364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
362-562
               

               
Cow position:
               
chr13:7046873-7046671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
364-562
               

               
Cow position:
               
chr13:50582819-50583027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
366-503
               

               
Cow position:
               
chr13:48222549-48222685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
369-564
               

               
Cow position:
               
chr13:54652326-54652520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
371-555
               

               
Cow position:
               
chr13:4404525-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
372-504
               

               
Cow position:
               
chr13:9884528-9884396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
374-509
               

               
Cow position:
               
chr13:43787846-43787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
374-510
               

               
Cow position:
               
chr13:37980767-37980901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
374-522
               

               
Cow position:
               
chr13:43839685-43839834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
376-560
               

               
Cow position:
               
chr13:50622823-50623018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
377-562
               

               
Cow position:
               
chr13:37554884-37555080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
380-501
               

               
Cow position:
               
chr13:29631595-29631473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
380-562
               

               
Cow position:
               
chr13:16790196-16790016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 127
               

               
Conread position:
               
381-493
               

               
Cow position:
               
chr13:24099032-24098918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
382-562
               

               
Cow position:
               
chr13:6113541-6113741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
383-508
               

               
Cow position:
               
chr13:1539224-1539100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
383-511
               

               
Cow position:
               
chr13:47227375-47227504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
383-516
               

               
Cow position:
               
chr13:37517193-37517325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
383-560
               

               
Cow position:
               
chr13:52177583-52177395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
384-562
               

               
Cow position:
               
chr13:11147040-11146844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
384-563
               

               
Cow position:
               
chr13:33854701-33854891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
385-497
               

               
Cow position:
               
chr13:33510359-33510472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
385-504
               

               
Cow position:
               
chr13:6608400-6608520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
385-560
               

               
Cow position:
               
chr13:28520445-28520615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
385-561
               

               
Cow position:
               
chr13:53865618-53865427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:9124906-9124719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:11410696-11410499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:20042283-20042473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:20333381-20333202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:30148581-30148764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 158
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr13:37030324-37030140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
385-563
               

               
Cow position:
               
chr13:2339159-2338983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
386-502
               

               
Cow position:
               
chr13:37978150-37978266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
386-562
               

               
Cow position:
               
chr13:30396688-30396509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
387-504
               

               
Cow position:
               
chr13:1075059-1075177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
387-504
               

               
Cow position:
               
chr13:44434851-44434967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
387-562
               

               
Cow position:
               
chr13:21188348-21188173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 120
               

               
Conread position:
               
387-562
               

               
Cow position:
               
chr13:21277487-21277666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
389-494
               

               
Cow position:
               
chr13:28524339-28524445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
389-554
               

               
Cow position:
               
chr13:6975867-6976042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr13:3153728-3153538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr13:47538181-47538359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr13:50646653-50646838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
389-564
               

               
Cow position:
               
chr13:11942201-11942386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
390-504
               

               
Cow position:
               
chr13:19261595-19261478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
390-562
               

               
Cow position:
               
chr13:369146-369335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
391-562
               

               
Cow position:
               
chr13:8392921-8393091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
392-502
               

               
Cow position:
               
chr13:32363205-32363316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
392-562
               

               
Cow position:
               
chr13:390667-390846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
392-562
               

               
Cow position:
               
chr13:29802589-29802418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
87, 7
               

               
Conread position:
               
392-564
               

               
Cow position:
               
chr13:16163557-16163377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
393-562
               

               
Cow position:
               
chr13:21246735-21246922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
393-563
               

               
Cow position:
               
chr13:8240633-8240468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
395-562
               

               
Cow position:
               
chr13:41155095-41155264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
396-504
               

               
Cow position:
               
chr13:25520944-25521053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
396-558
               

               
Cow position:
               
chr13:52027166-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
396-561
               

               
Cow position:
               
chr13:20535670-20535498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
397-564
               

               
Cow position:
               
chr13:1363425-1363249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
399-510
               

               
Cow position:
               
chr13:15808734-15808624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
399-564
               

               
Cow position:
               
chr13:15060608-15060442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
399-564
               

               
Cow position:
               
chr13:24796846-24796672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 85
               

               
Conread position:
               
405-564
               

               
Cow position:
               
chr13:8367677-8367507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
408-562
               

               
Cow position:
               
chr13:9687721-9687878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
409-561
               

               
Cow position:
               
chr13:25679279-25679119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
411-562
               

               
Cow position:
               
chr13:17975007-17975171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
413-562
               

               
Cow position:
               
chr13:37946435-37946595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
414-556
               

               
Cow position:
               
chr13:43292272-43292416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
418-554
               

               
Cow position:
               
chr13:57446170-57446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
418-558
               

               
Cow position:
               
chr13:9492720-9492571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
418-562
               

               
Cow position:
               
chr13:34299910-34300057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
418-562
               

               
Cow position:
               
chr13:42203974-42203822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
418-562
               

               
Cow position:
               
chr13:42614033-42613882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
421-560
               

               
Cow position:
               
chr13:62474894-62475034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
422-561
               

               
Cow position:
               
chr13:56431880-56432029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
422-564
               

               
Cow position:
               
chr13:9108730-9108883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
423-561
               

               
Cow position:
               
chr13:3003419-3003278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
425-562
               

               
Cow position:
               
chr13:53847179-53847328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.