• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055B16.3
        

               
Conread position:
               
95-564
               

               
Cow position:
               
chr21:40589704-40589219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
125-392
               

               
Cow position:
               
chr21:5137679-5137411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
125-562
               

               
Cow position:
               
chr21:32339927-32339486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
128-412
               

               
Cow position:
               
chr21:39450355-39450065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
131-474
               

               
Cow position:
               
chr21:17174962-17175291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
132-556
               

               
Cow position:
               
chr21:17193942-17193495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
135-392
               

               
Cow position:
               
chr21:27743562-27743825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 136
               

               
Conread position:
               
135-406
               

               
Cow position:
               
chr21:6102448-6102171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
136-458
               

               
Cow position:
               
chr21:27124306-27123981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
136-494
               

               
Cow position:
               
chr21:5566811-5567163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
136-502
               

               
Cow position:
               
chr21:30607266-30606911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
136-539
               

               
Cow position:
               
chr21:2420326-2420719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
137-345
               

               
Cow position:
               
chr21:34738420-34738638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
137-346
               

               
Cow position:
               
chr21:40244256-40244469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 136
               

               
Conread position:
               
137-386
               

               
Cow position:
               
chr21:912145-911896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
137-419
               

               
Cow position:
               
chr21:7067866-7068153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
137-502
               

               
Cow position:
               
chr21:17709648-17710005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr21:34010568-34010205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
137-515
               

               
Cow position:
               
chr21:27341775-27341396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
137-562
               

               
Cow position:
               
chr21:24296942-24296506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
137-562
               

               
Cow position:
               
chr21:30592481-30592055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
137-562
               

               
Cow position:
               
chr21:47861017-47861440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
137-563
               

               
Cow position:
               
chr21:21223112-21223522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
138-469
               

               
Cow position:
               
chr21:18845191-18844861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
139-279
               

               
Cow position:
               
chr21:28919801-28919659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
139-431
               

               
Cow position:
               
chr21:46829444-46829159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
139-439
               

               
Cow position:
               
chr21:46143768-46144080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
139-460
               

               
Cow position:
               
chr21:33729258-33729572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
139-468
               

               
Cow position:
               
chr21:18842414-18842087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 130
               

               
Conread position:
               
139-468
               

               
Cow position:
               
chr21:35897801-35897476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-478
               

               
Cow position:
               
chr21:17936195-17936532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
139-504
               

               
Cow position:
               
chr21:32237122-32237467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
139-510
               

               
Cow position:
               
chr21:18790731-18790373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
139-522
               

               
Cow position:
               
chr21:45473933-45473555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
139-554
               

               
Cow position:
               
chr21:31691302-31691723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
139-560
               

               
Cow position:
               
chr21:41155686-41156128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr21:6833876-6834309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr21:17183746-17184177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr21:17511601-17512033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr21:31662285-31662706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr21:30231878-30231436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 195
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr21:30849114-30848688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr21:31253360-31253789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
140-326
               

               
Cow position:
               
chr21:42464016-42463829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
36, 141
               

               
Conread position:
               
140-357
               

               
Cow position:
               
chr21:37361643-37361437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
140-494
               

               
Cow position:
               
chr21:9310871-9311229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
140-499
               

               
Cow position:
               
chr21:13365169-13365524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
140-504
               

               
Cow position:
               
chr21:41974551-41974191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
140-508
               

               
Cow position:
               
chr21:24642340-24642703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr21:28810438-28810027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
140-561
               

               
Cow position:
               
chr21:21169671-21169250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 105
               

               
Conread position:
               
141-491
               

               
Cow position:
               
chr21:8235716-8235388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
187, 38
               

               
Conread position:
               
141-492
               

               
Cow position:
               
chr21:18289489-18289833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
141-493
               

               
Cow position:
               
chr21:19196340-19195988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
141-503
               

               
Cow position:
               
chr21:26648180-26647830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
141-504
               

               
Cow position:
               
chr21:33263676-33264033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
141-510
               

               
Cow position:
               
chr21:30250383-30250011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
141-560
               

               
Cow position:
               
chr21:23606502-23606924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr21:641412-641843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr21:37299293-37299719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
141-563
               

               
Cow position:
               
chr21:24598487-24598903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
141-564
               

               
Cow position:
               
chr21:33982982-33982553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
142-410
               

               
Cow position:
               
chr21:20925680-20925411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
142-443
               

               
Cow position:
               
chr21:25536823-25537123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
142-495
               

               
Cow position:
               
chr21:35997000-35997349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
142-510
               

               
Cow position:
               
chr21:27146165-27145798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
142-552
               

               
Cow position:
               
chr21:3361188-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
142-559
               

               
Cow position:
               
chr21:11645141-11644710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
142-560
               

               
Cow position:
               
chr21:18568823-18568380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
142-562
               

               
Cow position:
               
chr21:23672570-23673004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
143-294
               

               
Cow position:
               
chr21:31278607-31278757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 95
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chr21:12616968-12617138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chr21:40065485-40065313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
143-326
               

               
Cow position:
               
chr21:36819385-36819207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
143-332
               

               
Cow position:
               
chr21:31159084-31159275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
143-337
               

               
Cow position:
               
chr21:34658862-34659054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
143-391
               

               
Cow position:
               
chr21:42913918-42913668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
143-396
               

               
Cow position:
               
chr21:1464056-1464311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr21:23984456-23984200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr21:3813655-3813391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr21:5596975-5597244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
143-410
               

               
Cow position:
               
chr21:47802432-47802167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
143-411
               

               
Cow position:
               
chr21:28993798-28993523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
143-423
               

               
Cow position:
               
chr21:28881970-28882244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
143-435
               

               
Cow position:
               
chr21:23192690-23192392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
143-435
               

               
Cow position:
               
chr21:24222710-24222420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
143-450
               

               
Cow position:
               
chr21:5636893-5636588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
143-450
               

               
Cow position:
               
chr21:13488347-13488659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 129
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr21:28512360-28512649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
143-476
               

               
Cow position:
               
chr21:45330780-45330449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
143-485
               

               
Cow position:
               
chr21:2679380-2679716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
143-485
               

               
Cow position:
               
chr21:8549505-8549847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
143-494
               

               
Cow position:
               
chr21:19766682-19767031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr21:16696198-16696549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
143-496
               

               
Cow position:
               
chr21:33210026-33210367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
143-497
               

               
Cow position:
               
chr21:44671581-44671924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
143-498
               

               
Cow position:
               
chr21:28190856-28191213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
143-498
               

               
Cow position:
               
chr21:37706579-37706234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
143-499
               

               
Cow position:
               
chr21:5153445-5153802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
143-502
               

               
Cow position:
               
chr21:42384333-42384694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr21:13035220-13034851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr21:15976470-15976819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 14
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr21:29484812-29485165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
143-507
               

               
Cow position:
               
chr21:28429277-28429634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr21:9990342-9990703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 124
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr21:24858139-24858508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr21:33350570-33350934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 123
               

               
Conread position:
               
143-511
               

               
Cow position:
               
chr21:33562843-33563197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
143-554
               

               
Cow position:
               
chr21:14760408-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
143-555
               

               
Cow position:
               
chr21:3763910-3763499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 100
               

               
Conread position:
               
143-558
               

               
Cow position:
               
chr21:15911228-15911633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
143-558
               

               
Cow position:
               
chr21:32559526-32559116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr21:643161-643577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr21:4282040-4281626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr21:4399627-4400051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr21:17428331-17428735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr21:18942001-18941595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
92, 34
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:4098703-4099106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:15445251-15444823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:22718953-22718524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:23568036-23568484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 117
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:39403710-39403269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr21:40133983-40134405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 122
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr21:9416070-9416501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr21:38900602-38901023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr21:23586704-23587133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr21:28734084-28733651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr21:38449624-38449191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr21:45355664-45356076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
143-564
               

               
Cow position:
               
chr21:46849295-46848872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
144-352
               

               
Cow position:
               
chr21:393850-394054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
144-369
               

               
Cow position:
               
chr21:40058634-40058860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr21:9998891-9998655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
144-380
               

               
Cow position:
               
chr21:18494794-18495036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 129
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr21:31676327-31676574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
144-410
               

               
Cow position:
               
chr21:6764873-6764608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
144-421
               

               
Cow position:
               
chr21:3381253-3380975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
144-423
               

               
Cow position:
               
chr21:32535805-32536082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
144-434
               

               
Cow position:
               
chr21:24607214-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
144-440
               

               
Cow position:
               
chr21:10727109-10727399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:3498327-3498635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:12366216-12366513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:13048368-13048051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:22194282-22193955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:40786499-40786819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 136
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr21:45151794-45151486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
144-467
               

               
Cow position:
               
chr21:34391142-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
144-468
               

               
Cow position:
               
chr21:16187970-16187657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
144-469
               

               
Cow position:
               
chr21:42540391-42540071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
144-476
               

               
Cow position:
               
chr21:41878305-41878627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
144-481
               

               
Cow position:
               
chr21:28027632-28027959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-483
               

               
Cow position:
               
chr21:25127437-25127769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
185, 14
               

               
Conread position:
               
144-489
               

               
Cow position:
               
chr21:11706923-11706595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr21:18828481-18828120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
144-499
               

               
Cow position:
               
chr21:44515103-44515442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
144-500
               

               
Cow position:
               
chr21:29069500-29069143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-502
               

               
Cow position:
               
chr21:42348849-42348511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr21:30990440-30990105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 64
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr21:33550-33906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr21:712761-713130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr21:10118382-10118753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 58
               

               
Conread position:
               
144-504
               

               
Cow position:
               
chr21:41597644-41597998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 130
               

               
Conread position:
               
144-509
               

               
Cow position:
               
chr21:29002333-29001963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
144-520
               

               
Cow position:
               
chr21:10151623-10152010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
144-532
               

               
Cow position:
               
chr21:19258655-19259042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
144-537
               

               
Cow position:
               
chr21:1483318-1483705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
144-555
               

               
Cow position:
               
chr21:22860830-22861244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
144-557
               

               
Cow position:
               
chr21:7564493-7564064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
144-559
               

               
Cow position:
               
chr21:46242411-46242003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
144-560
               

               
Cow position:
               
chr21:3585529-3585107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
144-561
               

               
Cow position:
               
chr21:22353401-22352998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:8618103-8618520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:20262505-20262088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:23801293-23800893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:27863691-27863260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:44251997-44251582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:46973299-46972906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr21:49700207-49699778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
144-563
               

               
Cow position:
               
chr21:1058905-1059318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
144-564
               

               
Cow position:
               
chr21:33791539-33791136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
144-564
               

               
Cow position:
               
chr21:36762882-36763323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
145-510
               

               
Cow position:
               
chr21:36795431-36795796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
145-562
               

               
Cow position:
               
chr21:10263869-10264294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chr21:13163723-13163887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
147-322
               

               
Cow position:
               
chr21:7716959-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
147-349
               

               
Cow position:
               
chr21:48484612-48484415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
147-387
               

               
Cow position:
               
chr21:21480351-21480113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr21:3047516-3047753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
147-403
               

               
Cow position:
               
chr21:12961071-12960812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
147-403
               

               
Cow position:
               
chr21:13898020-13898273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
147-404
               

               
Cow position:
               
chr21:28443546-28443280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
147-420
               

               
Cow position:
               
chr21:4189666-4189943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
147-455
               

               
Cow position:
               
chr21:38867744-38867450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
147-460
               

               
Cow position:
               
chr21:4080185-4080490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
147-460
               

               
Cow position:
               
chr21:22856046-22856360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
147-469
               

               
Cow position:
               
chr21:24887840-24888149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
147-473
               

               
Cow position:
               
chr21:13738400-13738707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
147-473
               

               
Cow position:
               
chr21:18940729-18940426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
147-474
               

               
Cow position:
               
chr21:19363632-19363304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
30, 90
               

               
Conread position:
               
147-478
               

               
Cow position:
               
chr21:4998655-4998335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
147-485
               

               
Cow position:
               
chr21:12801914-12801579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
147-485
               

               
Cow position:
               
chr21:46912373-46912712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
147-486
               

               
Cow position:
               
chr21:36642739-36643074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
147-492
               

               
Cow position:
               
chr21:1591380-1591722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
147-492
               

               
Cow position:
               
chr21:41620951-41621300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
147-497
               

               
Cow position:
               
chr21:725060-724711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
147-500
               

               
Cow position:
               
chr21:2927375-2927022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
147-501
               

               
Cow position:
               
chr21:10000912-10001259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
147-503
               

               
Cow position:
               
chr21:13128261-13127913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr21:19958054-19958400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr21:23322252-23321891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr21:27569329-27568986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr21:17433423-17433079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr21:23535548-23535904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr21:41579579-41579949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr21:42841761-42841404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:5426775-5427186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:5595493-5595889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:23311113-23310695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:27521496-27521083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:38120939-38121338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr21:42135792-42135360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
147-563
               

               
Cow position:
               
chr21:3236362-3236763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr21:5898566-5898148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr21:42500864-42501313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
148-398
               

               
Cow position:
               
chr21:2785946-2785696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
148-459
               

               
Cow position:
               
chr21:44114297-44113991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr21:44826051-44825701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
148-532
               

               
Cow position:
               
chr21:17643140-17642763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr21:28617425-28617671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
149-416
               

               
Cow position:
               
chr21:5344490-5344764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
149-469
               

               
Cow position:
               
chr21:15610985-15611291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
149-485
               

               
Cow position:
               
chr21:8125966-8125637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr21:42190334-42190097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
150-408
               

               
Cow position:
               
chr21:5455154-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
150-460
               

               
Cow position:
               
chr21:41455117-41454796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
150-496
               

               
Cow position:
               
chr21:11114546-11114882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
150-503
               

               
Cow position:
               
chr21:27624547-27624884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
150-555
               

               
Cow position:
               
chr21:15584575-15584171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
151-383
               

               
Cow position:
               
chr21:36793728-36793962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
151-423
               

               
Cow position:
               
chr21:45439414-45439131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
151-500
               

               
Cow position:
               
chr21:39401430-39401765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
151-562
               

               
Cow position:
               
chr21:15545535-15545103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
151-563
               

               
Cow position:
               
chr21:13714005-13713577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
153-416
               

               
Cow position:
               
chr21:11639859-11640120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
153-438
               

               
Cow position:
               
chr21:13489480-13489766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
153-503
               

               
Cow position:
               
chr21:47760613-47760954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
153-563
               

               
Cow position:
               
chr21:34739685-34740086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
154-402
               

               
Cow position:
               
chr21:8985388-8985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
154-409
               

               
Cow position:
               
chr21:45866775-45867025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
154-439
               

               
Cow position:
               
chr21:36163124-36162838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
154-466
               

               
Cow position:
               
chr21:43357422-43357108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 21
               

               
Conread position:
               
154-480
               

               
Cow position:
               
chr21:10007802-10007477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
154-481
               

               
Cow position:
               
chr21:41198572-41198236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 110
               

               
Conread position:
               
154-496
               

               
Cow position:
               
chr21:9028459-9028794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
154-503
               

               
Cow position:
               
chr21:37345263-37344915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
154-563
               

               
Cow position:
               
chr21:10114490-10114072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
154-563
               

               
Cow position:
               
chr21:14464415-14464846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
154-563
               

               
Cow position:
               
chr21:39664550-39664138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
154-563
               

               
Cow position:
               
chr21:47764274-47763866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
154-564
               

               
Cow position:
               
chr21:18065085-18064665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
157-431
               

               
Cow position:
               
chr21:13409981-13409718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
157-450
               

               
Cow position:
               
chr21:32454743-32455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
157-464
               

               
Cow position:
               
chr21:13840164-13840471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr21:7582068-7581724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
157-498
               

               
Cow position:
               
chr21:28626083-28626418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
157-562
               

               
Cow position:
               
chr21:41590715-41590307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
157-564
               

               
Cow position:
               
chr21:6051348-6051766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr21:18800686-18800347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr21:28989455-28989803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
158-510
               

               
Cow position:
               
chr21:32297668-32297326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 116
               

               
Conread position:
               
158-562
               

               
Cow position:
               
chr21:28244318-28244726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
158-564
               

               
Cow position:
               
chr21:12153978-12154386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
159-504
               

               
Cow position:
               
chr21:45921215-45920873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
159-510
               

               
Cow position:
               
chr21:4905129-4904774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
160-439
               

               
Cow position:
               
chr21:28998061-28997781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
160-504
               

               
Cow position:
               
chr21:10633796-10633454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 63
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr21:28477467-28477769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
161-562
               

               
Cow position:
               
chr21:6910038-6909630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr21:43240706-43240965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
164-562
               

               
Cow position:
               
chr21:46607735-46607353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
164-563
               

               
Cow position:
               
chr21:10823402-10823800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 190
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr21:5392688-5392348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
170-495
               

               
Cow position:
               
chr21:47495800-47495475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
170-562
               

               
Cow position:
               
chr21:17875339-17874931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
174-445
               

               
Cow position:
               
chr21:4267489-4267220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr21:18718529-18718803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr21:18155713-18155424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr21:44962655-44962939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
174-478
               

               
Cow position:
               
chr21:5021329-5021636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
174-561
               

               
Cow position:
               
chr21:34653942-34654328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
174-562
               

               
Cow position:
               
chr21:21216280-21215898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
175-465
               

               
Cow position:
               
chr21:11250727-11251016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 176
               

               
Conread position:
               
175-478
               

               
Cow position:
               
chr21:2495312-2495010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
175-504
               

               
Cow position:
               
chr21:11359899-11360213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 90
               

               
Conread position:
               
175-558
               

               
Cow position:
               
chr21:42007598-42007213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
175-561
               

               
Cow position:
               
chr21:957529-957927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
175-561
               

               
Cow position:
               
chr21:10005024-10004625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 61
               

               
Conread position:
               
175-561
               

               
Cow position:
               
chr21:11027496-11027100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
175-562
               

               
Cow position:
               
chr21:9301070-9301484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
175-562
               

               
Cow position:
               
chr21:19083739-19083326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
175-563
               

               
Cow position:
               
chr21:12462109-12461709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
175-563
               

               
Cow position:
               
chr21:20160545-20160938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr21:39809762-39809970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
176-491
               

               
Cow position:
               
chr21:48176689-48176993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
176-562
               

               
Cow position:
               
chr21:20152810-20153216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
177-402
               

               
Cow position:
               
chr21:34736894-34737114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
177-495
               

               
Cow position:
               
chr21:12723020-12723328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
177-563
               

               
Cow position:
               
chr21:29978899-29978505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
178-562
               

               
Cow position:
               
chr21:47009375-47008988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
179-504
               

               
Cow position:
               
chr21:19369481-19369160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
184-510
               

               
Cow position:
               
chr21:10538392-10538062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
188-400
               

               
Cow position:
               
chr21:24765163-24765364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
188-517
               

               
Cow position:
               
chr21:18780097-18779776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
188-562
               

               
Cow position:
               
chr21:14452111-14452492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
190-509
               

               
Cow position:
               
chr21:8451771-8452096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 57
               

               
Conread position:
               
192-560
               

               
Cow position:
               
chr21:34663499-34663876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
193-480
               

               
Cow position:
               
chr21:18818400-18818112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
194-504
               

               
Cow position:
               
chr21:6624035-6624343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 53
               

               
Conread position:
               
195-374
               

               
Cow position:
               
chr21:21143779-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
195-473
               

               
Cow position:
               
chr21:36789675-36789951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
197-305
               

               
Cow position:
               
chr21:8713947-8714054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
197-316
               

               
Cow position:
               
chr21:27712335-27712213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr21:13519074-13519282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-501
               

               
Cow position:
               
chr21:25382895-25383210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 43
               

               
Conread position:
               
197-509
               

               
Cow position:
               
chr21:46922-47232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 42
               

               
Conread position:
               
197-562
               

               
Cow position:
               
chr21:20418805-20418447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
197-562
               

               
Cow position:
               
chr21:23980303-23979920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
197-562
               

               
Cow position:
               
chr21:30222225-30222601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
198-496
               

               
Cow position:
               
chr21:25629027-25628733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
198-502
               

               
Cow position:
               
chr21:2657704-2657994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
158, 42
               

               
Conread position:
               
198-561
               

               
Cow position:
               
chr21:16152315-16152698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr21:45915823-45915558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
200-452
               

               
Cow position:
               
chr21:11198262-11198014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
202-421
               

               
Cow position:
               
chr21:34722901-34722685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
202-460
               

               
Cow position:
               
chr21:24094867-24094618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
202-497
               

               
Cow position:
               
chr21:21077486-21077780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 169
               

               
Conread position:
               
202-551
               

               
Cow position:
               
chr21:42096953-42097312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
202-561
               

               
Cow position:
               
chr21:9477047-9477422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
206-564
               

               
Cow position:
               
chr21:10673020-10673371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr21:13089578-13089288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr21:395762-396049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
209-510
               

               
Cow position:
               
chr21:28924008-28924303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 60
               

               
Conread position:
               
209-562
               

               
Cow position:
               
chr21:12301608-12301271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
209-562
               

               
Cow position:
               
chr21:33997335-33996991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr21:9980071-9979899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
210-471
               

               
Cow position:
               
chr21:18414943-18415204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
210-503
               

               
Cow position:
               
chr21:11456917-11456617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
210-509
               

               
Cow position:
               
chr21:45330055-45329757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
210-537
               

               
Cow position:
               
chr21:27668904-27669238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
210-561
               

               
Cow position:
               
chr21:15867201-15867559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
210-563
               

               
Cow position:
               
chr21:32574611-32574962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr21:44197-44407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
211-460
               

               
Cow position:
               
chr21:9698193-9697938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
211-561
               

               
Cow position:
               
chr21:16914669-16915039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
212-564
               

               
Cow position:
               
chr21:6713631-6713263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
214-498
               

               
Cow position:
               
chr21:3400937-3400651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
215-407
               

               
Cow position:
               
chr21:2293886-2294072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
215-468
               

               
Cow position:
               
chr21:2260460-2260216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 24
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr21:3818105-3818394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
215-507
               

               
Cow position:
               
chr21:39888850-39888549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
215-510
               

               
Cow position:
               
chr21:13585171-13584868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
215-552
               

               
Cow position:
               
chr21:10561686-10561336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
215-554
               

               
Cow position:
               
chr21:34151478-34151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
215-560
               

               
Cow position:
               
chr21:8206670-8207014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
215-562
               

               
Cow position:
               
chr21:937932-938280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
215-562
               

               
Cow position:
               
chr21:25800296-25800635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
216-387
               

               
Cow position:
               
chr21:4568184-4568356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
217-509
               

               
Cow position:
               
chr21:26244823-26245106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
217-562
               

               
Cow position:
               
chr21:38728065-38728415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
219-489
               

               
Cow position:
               
chr21:21633400-21633133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
220-504
               

               
Cow position:
               
chr21:6317774-6317501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
222-414
               

               
Cow position:
               
chr21:5985413-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
222-441
               

               
Cow position:
               
chr21:38664543-38664762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
222-460
               

               
Cow position:
               
chr21:6017521-6017767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
222-481
               

               
Cow position:
               
chr21:18850321-18850059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
106, 48
               

               
Conread position:
               
222-510
               

               
Cow position:
               
chr21:42022195-42022468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
222-563
               

               
Cow position:
               
chr21:22121427-22121762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
222-563
               

               
Cow position:
               
chr21:36756508-36756868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
222-563
               

               
Cow position:
               
chr21:46552197-46551865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
223-403
               

               
Cow position:
               
chr21:29224956-29224775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
223-500
               

               
Cow position:
               
chr21:17560023-17559742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
223-508
               

               
Cow position:
               
chr21:8527571-8527294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
223-558
               

               
Cow position:
               
chr21:9940288-9939953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 58
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr21:33727559-33727223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
224-460
               

               
Cow position:
               
chr21:19067438-19067669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
209, 55
               

               
Conread position:
               
224-560
               

               
Cow position:
               
chr21:21686324-21686674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
5, 48
               

               
Conread position:
               
225-563
               

               
Cow position:
               
chr21:6997846-6998201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
225-563
               

               
Cow position:
               
chr21:30835270-30835626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
226-530
               

               
Cow position:
               
chr21:47363834-47363519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
226-562
               

               
Cow position:
               
chr21:17890211-17890562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
227-546
               

               
Cow position:
               
chr21:20589227-20589554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
228-562
               

               
Cow position:
               
chr21:30236906-30236583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
228-563
               

               
Cow position:
               
chr21:22210333-22209983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr21:17364564-17364336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
229-491
               

               
Cow position:
               
chr21:37147165-37146907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
7, 51
               

               
Conread position:
               
229-503
               

               
Cow position:
               
chr21:10410132-10410408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
230-562
               

               
Cow position:
               
chr21:10858732-10859069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
249, 6
               

               
Conread position:
               
232-429
               

               
Cow position:
               
chr21:13495455-13495654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
236-460
               

               
Cow position:
               
chr21:46140962-46141190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
236-510
               

               
Cow position:
               
chr21:28237793-28237515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
236-554
               

               
Cow position:
               
chr21:41107841-41107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
236-560
               

               
Cow position:
               
chr21:47714086-47713750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 13
               

               
Conread position:
               
236-562
               

               
Cow position:
               
chr21:33580334-33580670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
236-563
               

               
Cow position:
               
chr21:37014482-37014166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
237-455
               

               
Cow position:
               
chr21:17929919-17929700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr21:33360110-33359894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
239-510
               

               
Cow position:
               
chr21:36909858-36910124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
239-541
               

               
Cow position:
               
chr21:30256345-30256047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 5
               

               
Conread position:
               
241-467
               

               
Cow position:
               
chr21:40432375-40432594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
241-489
               

               
Cow position:
               
chr21:24343339-24343096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
242-492
               

               
Cow position:
               
chr21:19673731-19673981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
242-562
               

               
Cow position:
               
chr21:33414158-33413838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
244-495
               

               
Cow position:
               
chr21:37640484-37640740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
244-562
               

               
Cow position:
               
chr21:19060168-19059832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
245-497
               

               
Cow position:
               
chr21:45262882-45262630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
245-561
               

               
Cow position:
               
chr21:1511221-1511544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 25
               

               
Conread position:
               
245-562
               

               
Cow position:
               
chr21:45971243-45970920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
246-562
               

               
Cow position:
               
chr21:44214055-44214370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
247-425
               

               
Cow position:
               
chr21:19210646-19210821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
248-552
               

               
Cow position:
               
chr21:7394314-7394618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
248-564
               

               
Cow position:
               
chr21:35899768-35900076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 151
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr21:27406319-27406070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
256-442
               

               
Cow position:
               
chr21:9302491-9302303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
261-495
               

               
Cow position:
               
chr21:29014618-29014381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
261-563
               

               
Cow position:
               
chr21:977204-976889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
262-527
               

               
Cow position:
               
chr21:16083171-16082903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
263-410
               

               
Cow position:
               
chr21:5612051-5612204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
263-563
               

               
Cow position:
               
chr21:5464689-5465007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
264-562
               

               
Cow position:
               
chr21:41140773-41140456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
265-562
               

               
Cow position:
               
chr21:742231-742533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
266-491
               

               
Cow position:
               
chr21:38268094-38267888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
212, 54
               

               
Conread position:
               
266-494
               

               
Cow position:
               
chr21:6758292-6758520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
266-563
               

               
Cow position:
               
chr21:11779584-11779278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
267-431
               

               
Cow position:
               
chr21:46463467-46463632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
267-460
               

               
Cow position:
               
chr21:16604361-16604175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
267-494
               

               
Cow position:
               
chr21:10292438-10292668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
267-507
               

               
Cow position:
               
chr21:2810216-2809973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
267-555
               

               
Cow position:
               
chr21:5238332-5238640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
267-563
               

               
Cow position:
               
chr21:15544272-15543979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
267-564
               

               
Cow position:
               
chr21:868979-868658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
270-485
               

               
Cow position:
               
chr21:37384435-37384650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
270-520
               

               
Cow position:
               
chr21:18060007-18059758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr21:13656680-13656375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr21:19458122-19458430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
55, 257
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr21:28919575-28919272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr21:36910689-36910996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
273-487
               

               
Cow position:
               
chr21:28955460-28955671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
278-417
               

               
Cow position:
               
chr21:22720184-22720327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr21:19513822-19514040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
278-561
               

               
Cow position:
               
chr21:21907472-21907183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
278-562
               

               
Cow position:
               
chr21:8349285-8349581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
278-562
               

               
Cow position:
               
chr21:29014956-29014658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
279-501
               

               
Cow position:
               
chr21:43259180-43259403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
282-459
               

               
Cow position:
               
chr21:10883963-10883781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
283-493
               

               
Cow position:
               
chr21:471639-471850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
283-555
               

               
Cow position:
               
chr21:17455348-17455634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
284-560
               

               
Cow position:
               
chr21:10657139-10656844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
284-562
               

               
Cow position:
               
chr21:17982939-17983230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
285-510
               

               
Cow position:
               
chr21:46132548-46132766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
193, 22
               

               
Conread position:
               
285-562
               

               
Cow position:
               
chr21:42209667-42209386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
287-494
               

               
Cow position:
               
chr21:734562-734766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
287-562
               

               
Cow position:
               
chr21:17997229-17997506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
287-563
               

               
Cow position:
               
chr21:44861145-44860880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
288-497
               

               
Cow position:
               
chr21:9334459-9334668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 102
               

               
Conread position:
               
288-550
               

               
Cow position:
               
chr21:26753462-26753716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
292-562
               

               
Cow position:
               
chr21:71556-71845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
293-497
               

               
Cow position:
               
chr21:7377955-7377746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
293-539
               

               
Cow position:
               
chr21:20165613-20165873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
294-561
               

               
Cow position:
               
chr21:36696117-36695832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
295-494
               

               
Cow position:
               
chr21:19874378-19874178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
295-562
               

               
Cow position:
               
chr21:38720226-38720508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr21:40192326-40192112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
296-562
               

               
Cow position:
               
chr21:28030263-28030538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
298-564
               

               
Cow position:
               
chr21:37235362-37235624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
303-498
               

               
Cow position:
               
chr21:17062919-17063102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
175, 15
               

               
Conread position:
               
311-504
               

               
Cow position:
               
chr21:42562632-42562815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 15
               

               
Conread position:
               
311-562
               

               
Cow position:
               
chr21:6387990-6388229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
312-560
               

               
Cow position:
               
chr21:7768429-7768683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
313-468
               

               
Cow position:
               
chr21:1764868-1764719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
313-510
               

               
Cow position:
               
chr21:29405223-29405034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
320-561
               

               
Cow position:
               
chr21:29658282-29658532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
321-510
               

               
Cow position:
               
chr21:20213772-20213585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
323-483
               

               
Cow position:
               
chr21:23460146-23460299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
155, 20
               

               
Conread position:
               
323-495
               

               
Cow position:
               
chr21:40769296-40769471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr21:12739085-12739264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
323-506
               

               
Cow position:
               
chr21:41828160-41827969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
323-523
               

               
Cow position:
               
chr21:8546012-8545816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
323-551
               

               
Cow position:
               
chr21:13036894-13036679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr21:13588768-13589014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
323-560
               

               
Cow position:
               
chr21:44724359-44724119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
323-563
               

               
Cow position:
               
chr21:31159409-31159646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
154, 61
               

               
Conread position:
               
323-563
               

               
Cow position:
               
chr21:36508247-36508490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 33
               

               
Conread position:
               
323-563
               

               
Cow position:
               
chr21:41918240-41917979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
324-509
               

               
Cow position:
               
chr21:30157802-30157614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
325-554
               

               
Cow position:
               
chr21:41287787-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr21:7583856-7584037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
331-473
               

               
Cow position:
               
chr21:17695647-17695512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
337-510
               

               
Cow position:
               
chr21:42463669-42463501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
337-562
               

               
Cow position:
               
chr21:31279278-31279512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
141, 17
               

               
Conread position:
               
340-562
               

               
Cow position:
               
chr21:42144850-42145078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
341-522
               

               
Cow position:
               
chr21:20318540-20318716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
137, 18
               

               
Conread position:
               
342-510
               

               
Cow position:
               
chr21:41610194-41610363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
345-562
               

               
Cow position:
               
chr21:24797684-24797914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 40
               

               
Conread position:
               
348-492
               

               
Cow position:
               
chr21:17265969-17265825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
348-525
               

               
Cow position:
               
chr21:46470219-46470390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
348-562
               

               
Cow position:
               
chr21:40475531-40475760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
348-562
               

               
Cow position:
               
chr21:43692847-43693076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
5, 36
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr21:7493241-7493087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
349-509
               

               
Cow position:
               
chr21:8213245-8213089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
350-562
               

               
Cow position:
               
chr21:37838032-37837819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
127, 39
               

               
Conread position:
               
351-482
               

               
Cow position:
               
chr21:8231642-8231513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
351-490
               

               
Cow position:
               
chr21:12207768-12207629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
351-494
               

               
Cow position:
               
chr21:30119729-30119871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
351-504
               

               
Cow position:
               
chr21:44592174-44592023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
351-562
               

               
Cow position:
               
chr21:46612759-46612545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
352-510
               

               
Cow position:
               
chr21:13163895-13164052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
354-504
               

               
Cow position:
               
chr21:5342056-5341907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
354-510
               

               
Cow position:
               
chr21:36682363-36682518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
354-562
               

               
Cow position:
               
chr21:27677520-27677742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
357-509
               

               
Cow position:
               
chr21:30980536-30980386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
357-564
               

               
Cow position:
               
chr21:41040985-41041209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
358-498
               

               
Cow position:
               
chr21:13225757-13225896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
358-535
               

               
Cow position:
               
chr21:6736147-6735964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
359-537
               

               
Cow position:
               
chr21:7221297-7221117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
360-564
               

               
Cow position:
               
chr21:25014982-25014779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
361-486
               

               
Cow position:
               
chr21:35647783-35647659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
361-502
               

               
Cow position:
               
chr21:41050935-41051073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
361-515
               

               
Cow position:
               
chr21:22939812-22939966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
366-508
               

               
Cow position:
               
chr21:14228230-14228089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
366-564
               

               
Cow position:
               
chr21:40571412-40571210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
367-562
               

               
Cow position:
               
chr21:37928700-37928910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
371-562
               

               
Cow position:
               
chr21:15012494-15012690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
374-522
               

               
Cow position:
               
chr21:265682-265828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
374-561
               

               
Cow position:
               
chr21:26735467-26735655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
375-562
               

               
Cow position:
               
chr21:48482469-48482271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
376-491
               

               
Cow position:
               
chr21:19927204-19927093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
376-563
               

               
Cow position:
               
chr21:30145568-30145373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
91, 17
               

               
Conread position:
               
377-562
               

               
Cow position:
               
chr21:15869748-15869945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 193
               

               
Conread position:
               
378-497
               

               
Cow position:
               
chr21:43265335-43265214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
378-562
               

               
Cow position:
               
chr21:42189697-42189501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
379-552
               

               
Cow position:
               
chr21:2294091-2294261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
379-562
               

               
Cow position:
               
chr21:6291807-6292008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
381-510
               

               
Cow position:
               
chr21:42131292-42131162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
381-562
               

               
Cow position:
               
chr21:30977192-30977009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
383-555
               

               
Cow position:
               
chr21:45651395-45651209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
385-498
               

               
Cow position:
               
chr21:8687076-8686962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr21:21940340-21940152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr21:27409665-27409479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr21:29418639-29418834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 27
               

               
Conread position:
               
387-504
               

               
Cow position:
               
chr21:42017534-42017416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
387-562
               

               
Cow position:
               
chr21:2785417-2785242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
387-563
               

               
Cow position:
               
chr21:49353705-49353884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
389-510
               

               
Cow position:
               
chr21:5214419-5214540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 111
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr21:745246-745429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
389-562
               

               
Cow position:
               
chr21:4108846-4109036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
389-564
               

               
Cow position:
               
chr21:8986093-8986287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
390-561
               

               
Cow position:
               
chr21:18783397-18783208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
390-562
               

               
Cow position:
               
chr21:235977-236148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
392-539
               

               
Cow position:
               
chr21:46463651-46463802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
392-563
               

               
Cow position:
               
chr21:12298668-12298847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
393-510
               

               
Cow position:
               
chr21:25159247-25159364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
395-504
               

               
Cow position:
               
chr21:37361165-37361055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
396-560
               

               
Cow position:
               
chr21:43642617-43642775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
397-563
               

               
Cow position:
               
chr21:30970014-30970195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
398-562
               

               
Cow position:
               
chr21:27744105-27744288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
398-562
               

               
Cow position:
               
chr21:41737988-41738167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
399-562
               

               
Cow position:
               
chr21:6945456-6945619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 93
               

               
Conread position:
               
399-562
               

               
Cow position:
               
chr21:28617869-28618035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
403-562
               

               
Cow position:
               
chr21:8523726-8523891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
403-562
               

               
Cow position:
               
chr21:30205290-30205135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
403-563
               

               
Cow position:
               
chr21:438647-438816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
405-562
               

               
Cow position:
               
chr21:15271350-15271180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
414-562
               

               
Cow position:
               
chr21:34581595-34581450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 121
               

               
Conread position:
               
418-561
               

               
Cow position:
               
chr21:18495321-18495473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
433-562
               

               
Cow position:
               
chr21:18497879-18497740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.