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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055B16.3
        

               
Conread position:
               
124-556
               

               
Cow position:
               
chr24:27039759-27040215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
125-383
               

               
Cow position:
               
chr24:21860497-21860243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 22
               

               
Conread position:
               
125-562
               

               
Cow position:
               
chr24:16994615-16995049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
129-326
               

               
Cow position:
               
chr24:30776942-30776748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
130-484
               

               
Cow position:
               
chr24:19261640-19261299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
131-562
               

               
Cow position:
               
chr24:18734626-18734209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
131-562
               

               
Cow position:
               
chr24:27906162-27906609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 142
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr24:38002009-38001710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
134-489
               

               
Cow position:
               
chr24:33724121-33723761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
136-512
               

               
Cow position:
               
chr24:29063912-29063552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
137-354
               

               
Cow position:
               
chr24:27809915-27810135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 109
               

               
Conread position:
               
137-430
               

               
Cow position:
               
chr24:591644-591925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
137-442
               

               
Cow position:
               
chr24:23442847-23442545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
137-485
               

               
Cow position:
               
chr24:8886650-8886990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
137-510
               

               
Cow position:
               
chr24:15861867-15861489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
137-539
               

               
Cow position:
               
chr24:29781896-29782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
137-562
               

               
Cow position:
               
chr24:25424797-25425187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
137-563
               

               
Cow position:
               
chr24:18374508-18374936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
138-562
               

               
Cow position:
               
chr24:28699795-28700214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 22
               

               
Conread position:
               
138-562
               

               
Cow position:
               
chr24:40592459-40592884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
138-563
               

               
Cow position:
               
chr24:39226734-39227145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
138-564
               

               
Cow position:
               
chr24:2970871-2970453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
139-341
               

               
Cow position:
               
chr24:6677239-6677448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
139-410
               

               
Cow position:
               
chr24:39955309-39955046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
139-460
               

               
Cow position:
               
chr24:6071328-6071641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 137
               

               
Conread position:
               
139-485
               

               
Cow position:
               
chr24:36174046-36173703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
139-493
               

               
Cow position:
               
chr24:32370174-32369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
139-500
               

               
Cow position:
               
chr24:43200537-43200181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-504
               

               
Cow position:
               
chr24:20874413-20874780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
139-543
               

               
Cow position:
               
chr24:27267371-27267762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
139-560
               

               
Cow position:
               
chr24:15246899-15246489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr24:27844783-27844362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
139-562
               

               
Cow position:
               
chr24:41985713-41986145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
139-563
               

               
Cow position:
               
chr24:17104830-17104400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
140-415
               

               
Cow position:
               
chr24:250829-250567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
140-496
               

               
Cow position:
               
chr24:28319462-28319118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
140-504
               

               
Cow position:
               
chr24:11119020-11119376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
140-562
               

               
Cow position:
               
chr24:7079529-7079935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
141-390
               

               
Cow position:
               
chr24:6154564-6154798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
141-391
               

               
Cow position:
               
chr24:40184362-40184611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
141-561
               

               
Cow position:
               
chr24:27874342-27874743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
141-562
               

               
Cow position:
               
chr24:24491273-24490855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
141-564
               

               
Cow position:
               
chr24:42103113-42103534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
142-357
               

               
Cow position:
               
chr24:39493037-39493249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
142-471
               

               
Cow position:
               
chr24:6341909-6342243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 208
               

               
Conread position:
               
142-558
               

               
Cow position:
               
chr24:35675283-35675698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
142-561
               

               
Cow position:
               
chr24:44808985-44809409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
143-264
               

               
Cow position:
               
chr24:15288597-15288722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
143-325
               

               
Cow position:
               
chr24:33238808-33238626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-327
               

               
Cow position:
               
chr24:2730830-2730651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
143-341
               

               
Cow position:
               
chr24:18324356-18324558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr24:27941268-27941031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 43
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr24:11876624-11876872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
143-393
               

               
Cow position:
               
chr24:27967820-27968073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
143-402
               

               
Cow position:
               
chr24:16625761-16625488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
143-417
               

               
Cow position:
               
chr24:15473095-15473369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
143-431
               

               
Cow position:
               
chr24:21768382-21768669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
143-459
               

               
Cow position:
               
chr24:42345268-42344944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
143-460
               

               
Cow position:
               
chr24:27096426-27096743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
143-460
               

               
Cow position:
               
chr24:39440817-39440514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
143-462
               

               
Cow position:
               
chr24:38347420-38347729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
143-478
               

               
Cow position:
               
chr24:8770324-8770649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
143-482
               

               
Cow position:
               
chr24:45004694-45005024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
143-495
               

               
Cow position:
               
chr24:25677774-25678113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
143-497
               

               
Cow position:
               
chr24:20225477-20225828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
143-497
               

               
Cow position:
               
chr24:34272542-34272902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
143-502
               

               
Cow position:
               
chr24:814525-814173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
33, 67
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr24:19769238-19769594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr24:31159368-31159714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:18331476-18331825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
185, 35
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:18485260-18484891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:18741831-18741467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:29673259-29673625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:32205054-32204690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
143-510
               

               
Cow position:
               
chr24:33944147-33944506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
143-522
               

               
Cow position:
               
chr24:5754581-5754956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
143-530
               

               
Cow position:
               
chr24:25885418-25885033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
143-547
               

               
Cow position:
               
chr24:12992795-12993187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
143-550
               

               
Cow position:
               
chr24:44041269-44040852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
143-560
               

               
Cow position:
               
chr24:39483213-39483632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
143-561
               

               
Cow position:
               
chr24:25111942-25112366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:211721-212141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 130
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:3493633-3494052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:11886897-11887324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:27608358-27607940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:28062685-28063121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
143-562
               

               
Cow position:
               
chr24:33098748-33098301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr24:19658288-19658706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr24:30314296-30313857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 130
               

               
Conread position:
               
143-563
               

               
Cow position:
               
chr24:32124902-32124482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
144-326
               

               
Cow position:
               
chr24:25950926-25950749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
144-326
               

               
Cow position:
               
chr24:38375025-38375202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
144-338
               

               
Cow position:
               
chr24:21264770-21264575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
144-375
               

               
Cow position:
               
chr24:44702718-44702944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr24:5151975-5152214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr24:24137110-24136873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr24:36486319-36486077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
144-402
               

               
Cow position:
               
chr24:36555088-36554837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
144-444
               

               
Cow position:
               
chr24:20024348-20024651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
144-458
               

               
Cow position:
               
chr24:27341283-27340967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr24:7913739-7914060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
144-460
               

               
Cow position:
               
chr24:25320730-25321039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
144-472
               

               
Cow position:
               
chr24:32693443-32693785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-476
               

               
Cow position:
               
chr24:18243724-18243397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 48
               

               
Conread position:
               
144-482
               

               
Cow position:
               
chr24:23616435-23616773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
144-486
               

               
Cow position:
               
chr24:35332460-35332805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
144-501
               

               
Cow position:
               
chr24:43432542-43432883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr24:17294446-17294100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr24:19466192-19465820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
144-503
               

               
Cow position:
               
chr24:33230405-33230772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 233
               

               
Conread position:
               
144-509
               

               
Cow position:
               
chr24:34532864-34533226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr24:18390548-18390196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr24:27290616-27290976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
144-510
               

               
Cow position:
               
chr24:29679570-29679208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
144-560
               

               
Cow position:
               
chr24:23695156-23694742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
144-561
               

               
Cow position:
               
chr24:15508794-15508399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
144-561
               

               
Cow position:
               
chr24:17860510-17860092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr24:6508023-6507618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
144-562
               

               
Cow position:
               
chr24:32054413-32054815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
144-563
               

               
Cow position:
               
chr24:17955707-17955293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
144-563
               

               
Cow position:
               
chr24:30545115-30544718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
144-564
               

               
Cow position:
               
chr24:30229209-30229647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 177
               

               
Conread position:
               
145-464
               

               
Cow position:
               
chr24:3152834-3152520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
145-503
               

               
Cow position:
               
chr24:39905720-39905349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
145-562
               

               
Cow position:
               
chr24:29606327-29605862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
146-403
               

               
Cow position:
               
chr24:18405564-18405314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
146-485
               

               
Cow position:
               
chr24:201893-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
146-503
               

               
Cow position:
               
chr24:40849901-40850249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
146-562
               

               
Cow position:
               
chr24:24755192-24755600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
147-309
               

               
Cow position:
               
chr24:24002719-24002881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 126
               

               
Conread position:
               
147-347
               

               
Cow position:
               
chr24:7301197-7301402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr24:6340761-6340994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr24:18266428-18266174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr24:27720010-27719772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
147-402
               

               
Cow position:
               
chr24:42007489-42007738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr24:35794996-35794731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
147-460
               

               
Cow position:
               
chr24:17407133-17407443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
147-460
               

               
Cow position:
               
chr24:38814715-38815021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
147-478
               

               
Cow position:
               
chr24:12498738-12499070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr24:28496845-28496482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
147-504
               

               
Cow position:
               
chr24:40129866-40130228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
147-552
               

               
Cow position:
               
chr24:31816329-31816736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 105
               

               
Conread position:
               
147-554
               

               
Cow position:
               
chr24:23556587-23556174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
147-561
               

               
Cow position:
               
chr24:28721632-28722047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr24:5141684-5142109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr24:27149141-27149553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr24:33372294-33372717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 179
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr24:34564870-34565260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
147-562
               

               
Cow position:
               
chr24:41980921-41980489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr24:2402633-2402204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr24:34369264-34368853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr24:34742493-34742922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
147-564
               

               
Cow position:
               
chr24:39350463-39350071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
148-403
               

               
Cow position:
               
chr24:17363904-17363651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
148-485
               

               
Cow position:
               
chr24:27052750-27052419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
148-502
               

               
Cow position:
               
chr24:29596071-29595714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 115
               

               
Conread position:
               
148-563
               

               
Cow position:
               
chr24:27748394-27748792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
149-492
               

               
Cow position:
               
chr24:26732193-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
149-497
               

               
Cow position:
               
chr24:18974947-18975301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
149-562
               

               
Cow position:
               
chr24:29388992-29389388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
149-562
               

               
Cow position:
               
chr24:32609385-32609820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
150-383
               

               
Cow position:
               
chr24:27207448-27207216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
153-485
               

               
Cow position:
               
chr24:39159793-39159471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 7
               

               
Conread position:
               
153-562
               

               
Cow position:
               
chr24:26929198-26928770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
153-563
               

               
Cow position:
               
chr24:28553795-28553400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
154-407
               

               
Cow position:
               
chr24:39219096-39218839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
154-425
               

               
Cow position:
               
chr24:37246467-37246204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
154-440
               

               
Cow position:
               
chr24:6487671-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
154-492
               

               
Cow position:
               
chr24:43364114-43364445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
154-495
               

               
Cow position:
               
chr24:29170716-29171051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
154-501
               

               
Cow position:
               
chr24:41068019-41068356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
154-557
               

               
Cow position:
               
chr24:7917618-7917213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
154-562
               

               
Cow position:
               
chr24:30484193-30483773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
155-412
               

               
Cow position:
               
chr24:6160332-6160083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
157-326
               

               
Cow position:
               
chr24:11006969-11007137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
157-369
               

               
Cow position:
               
chr24:40055968-40055765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
157-429
               

               
Cow position:
               
chr24:7023148-7023440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 37
               

               
Conread position:
               
157-493
               

               
Cow position:
               
chr24:31324034-31324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
157-503
               

               
Cow position:
               
chr24:44054388-44054071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
157-510
               

               
Cow position:
               
chr24:2096135-2095778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
157-562
               

               
Cow position:
               
chr24:11839932-11840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
157-563
               

               
Cow position:
               
chr24:27054154-27054560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 150
               

               
Conread position:
               
157-563
               

               
Cow position:
               
chr24:35073846-35074254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 53
               

               
Conread position:
               
158-460
               

               
Cow position:
               
chr24:2391946-2392240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
158-482
               

               
Cow position:
               
chr24:3430490-3430809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
158-561
               

               
Cow position:
               
chr24:36404393-36403986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
160-338
               

               
Cow position:
               
chr24:35405814-35405632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
160-561
               

               
Cow position:
               
chr24:24311257-24311653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
160-562
               

               
Cow position:
               
chr24:7744491-7744892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
161-564
               

               
Cow position:
               
chr24:42825740-42825342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
163-492
               

               
Cow position:
               
chr24:34761653-34761980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
163-562
               

               
Cow position:
               
chr24:11005422-11005844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
169-478
               

               
Cow position:
               
chr24:9087716-9087414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
170-485
               

               
Cow position:
               
chr24:10518324-10518635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
174-431
               

               
Cow position:
               
chr24:10841443-10841182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
174-452
               

               
Cow position:
               
chr24:22975909-22976183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
174-473
               

               
Cow position:
               
chr24:33981459-33981756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr24:9222603-9222294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
174-510
               

               
Cow position:
               
chr24:28327310-28326975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
174-562
               

               
Cow position:
               
chr24:30235642-30236043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
175-392
               

               
Cow position:
               
chr24:18695395-18695607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
175-429
               

               
Cow position:
               
chr24:21918444-21918205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
175-440
               

               
Cow position:
               
chr24:10012546-10012786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
175-460
               

               
Cow position:
               
chr24:20250130-20249842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
175-473
               

               
Cow position:
               
chr24:17159520-17159817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr24:22689812-22689487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
175-509
               

               
Cow position:
               
chr24:24457473-24457147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
175-562
               

               
Cow position:
               
chr24:25194040-25194437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
175-563
               

               
Cow position:
               
chr24:32823009-32822623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 217
               

               
Conread position:
               
176-485
               

               
Cow position:
               
chr24:22224952-22225266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
178-514
               

               
Cow position:
               
chr24:31359099-31359430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
182-473
               

               
Cow position:
               
chr24:34579185-34578910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
184-458
               

               
Cow position:
               
chr24:3663947-3664228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
184-564
               

               
Cow position:
               
chr24:6102605-6102996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 86
               

               
Conread position:
               
184-564
               

               
Cow position:
               
chr24:16509755-16510144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
185-392
               

               
Cow position:
               
chr24:17567164-17567373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
185-562
               

               
Cow position:
               
chr24:32758980-32758610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 96
               

               
Conread position:
               
187-460
               

               
Cow position:
               
chr24:15707660-15707391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
187-524
               

               
Cow position:
               
chr24:18970722-18970387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 22
               

               
Conread position:
               
188-410
               

               
Cow position:
               
chr24:5911-5694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 33
               

               
Conread position:
               
188-519
               

               
Cow position:
               
chr24:6700586-6700244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
188-556
               

               
Cow position:
               
chr24:10125648-10126044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 211
               

               
Conread position:
               
192-460
               

               
Cow position:
               
chr24:22114527-22114780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
194-450
               

               
Cow position:
               
chr24:39143397-39143656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
195-562
               

               
Cow position:
               
chr24:19800640-19801010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr24:5633241-5632942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr24:34008785-34008474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 12
               

               
Conread position:
               
197-510
               

               
Cow position:
               
chr24:28253502-28253824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr24:28990361-28990712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr24:22079252-22079632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
197-561
               

               
Cow position:
               
chr24:10671181-10671567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
198-387
               

               
Cow position:
               
chr24:29708007-29707811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
198-406
               

               
Cow position:
               
chr24:34782990-34782784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
198-460
               

               
Cow position:
               
chr24:27299967-27300212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
198-558
               

               
Cow position:
               
chr24:6132080-6131720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
199-564
               

               
Cow position:
               
chr24:16089030-16089402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 73
               

               
Conread position:
               
201-509
               

               
Cow position:
               
chr24:13626078-13626388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
202-485
               

               
Cow position:
               
chr24:41001057-41001342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
202-498
               

               
Cow position:
               
chr24:22647545-22647249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
202-562
               

               
Cow position:
               
chr24:28600067-28599703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
204-407
               

               
Cow position:
               
chr24:19633872-19634074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
204-479
               

               
Cow position:
               
chr24:2111608-2111335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
204-495
               

               
Cow position:
               
chr24:15347393-15347679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
206-562
               

               
Cow position:
               
chr24:30897737-30897391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
209-483
               

               
Cow position:
               
chr24:17434415-17434687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 147
               

               
Conread position:
               
209-498
               

               
Cow position:
               
chr24:19535449-19535163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
209-546
               

               
Cow position:
               
chr24:33465802-33465486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
209-554
               

               
Cow position:
               
chr24:27824263-27824599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
209-562
               

               
Cow position:
               
chr24:12851529-12851866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
210-387
               

               
Cow position:
               
chr24:29360190-29360013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr24:885878-885693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
210-509
               

               
Cow position:
               
chr24:33222135-33221828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
210-512
               

               
Cow position:
               
chr24:18771382-18771075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr24:352800-352433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr24:20801539-20801174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr24:21519242-21519601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
210-562
               

               
Cow position:
               
chr24:35985916-35985562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
210-564
               

               
Cow position:
               
chr24:34396369-34396017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
211-401
               

               
Cow position:
               
chr24:27202402-27202595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
213-530
               

               
Cow position:
               
chr24:28690499-28690808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr24:40983973-40984142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr24:30226750-30226928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr24:31382709-31382889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
113, 13
               

               
Conread position:
               
215-485
               

               
Cow position:
               
chr24:27726203-27725932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr24:26554791-26554499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
215-555
               

               
Cow position:
               
chr24:42877060-42876736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
228, 58
               

               
Conread position:
               
215-562
               

               
Cow position:
               
chr24:21606851-21606505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
215-564
               

               
Cow position:
               
chr24:16268303-16267980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
216-472
               

               
Cow position:
               
chr24:37024834-37025078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
217-510
               

               
Cow position:
               
chr24:14648536-14648254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
218-555
               

               
Cow position:
               
chr24:41423422-41423760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
218-561
               

               
Cow position:
               
chr24:27220278-27219918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
219-476
               

               
Cow position:
               
chr24:18355036-18355278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
18, 58
               

               
Conread position:
               
219-539
               

               
Cow position:
               
chr24:16645512-16645173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
222-494
               

               
Cow position:
               
chr24:7476536-7476264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
222-509
               

               
Cow position:
               
chr24:43683653-43683359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
223-353
               

               
Cow position:
               
chr24:20969978-20969850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
223-494
               

               
Cow position:
               
chr24:16895618-16895349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
223-521
               

               
Cow position:
               
chr24:18017047-18017344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
223-562
               

               
Cow position:
               
chr24:19186780-19187103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
223-563
               

               
Cow position:
               
chr24:17832996-17832657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
224-503
               

               
Cow position:
               
chr24:32070785-32071059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
224-562
               

               
Cow position:
               
chr24:18999866-19000214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
225-498
               

               
Cow position:
               
chr24:29586813-29587091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
225-509
               

               
Cow position:
               
chr24:10299903-10300180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
228-504
               

               
Cow position:
               
chr24:12200590-12200310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
229-460
               

               
Cow position:
               
chr24:25092354-25092575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
229-563
               

               
Cow position:
               
chr24:37037723-37038063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
231-443
               

               
Cow position:
               
chr24:39914206-39914409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
231-564
               

               
Cow position:
               
chr24:35576706-35576384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
236-479
               

               
Cow position:
               
chr24:9036029-9036259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
236-558
               

               
Cow position:
               
chr24:18357220-18356890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
239-563
               

               
Cow position:
               
chr24:31258502-31258187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
240-563
               

               
Cow position:
               
chr24:37945797-37945474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
241-555
               

               
Cow position:
               
chr24:26455677-26455986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
244-520
               

               
Cow position:
               
chr24:19474826-19474549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
245-402
               

               
Cow position:
               
chr24:27552737-27552892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
246-460
               

               
Cow position:
               
chr24:39289895-39290099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
246-564
               

               
Cow position:
               
chr24:7777773-7777461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
247-496
               

               
Cow position:
               
chr24:11112744-11112493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
247-562
               

               
Cow position:
               
chr24:18281791-18281464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
248-556
               

               
Cow position:
               
chr24:4724818-4725124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
229, 23
               

               
Conread position:
               
249-489
               

               
Cow position:
               
chr24:19736483-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
250-489
               

               
Cow position:
               
chr24:17752266-17752029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
250-554
               

               
Cow position:
               
chr24:38841557-38841270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
228, 18
               

               
Conread position:
               
256-556
               

               
Cow position:
               
chr24:24662282-24661986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
257-462
               

               
Cow position:
               
chr24:40837626-40837828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
260-530
               

               
Cow position:
               
chr24:32739421-32739148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 133
               

               
Conread position:
               
262-510
               

               
Cow position:
               
chr24:8006164-8006411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
262-562
               

               
Cow position:
               
chr24:14550651-14550961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
263-511
               

               
Cow position:
               
chr24:28289395-28289146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
263-563
               

               
Cow position:
               
chr24:27713550-27713238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
265-494
               

               
Cow position:
               
chr24:32190925-32191144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
220, 88
               

               
Conread position:
               
265-527
               

               
Cow position:
               
chr24:36008342-36008607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 94
               

               
Conread position:
               
265-561
               

               
Cow position:
               
chr24:39523588-39523280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
268-457
               

               
Cow position:
               
chr24:23863775-23863578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
268-502
               

               
Cow position:
               
chr24:26880626-26880849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
211, 16
               

               
Conread position:
               
268-562
               

               
Cow position:
               
chr24:40537473-40537161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr24:36711062-36711260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
270-510
               

               
Cow position:
               
chr24:5683138-5683384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
270-510
               

               
Cow position:
               
chr24:18314089-18313828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr24:10242920-10242614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr24:38006844-38006541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
270-563
               

               
Cow position:
               
chr24:37395348-37395035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
270-564
               

               
Cow position:
               
chr24:34390158-34390444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
272-562
               

               
Cow position:
               
chr24:389964-390271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
278-498
               

               
Cow position:
               
chr24:20594407-20594638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
278-498
               

               
Cow position:
               
chr24:27418229-27418011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
278-553
               

               
Cow position:
               
chr24:35631856-35632143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
278-560
               

               
Cow position:
               
chr24:20807410-20807693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
278-561
               

               
Cow position:
               
chr24:28233918-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
278-562
               

               
Cow position:
               
chr24:38478514-38478223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
279-562
               

               
Cow position:
               
chr24:2359306-2359014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
283-510
               

               
Cow position:
               
chr24:35150396-35150623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
292-507
               

               
Cow position:
               
chr24:16118253-16118464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
186, 37
               

               
Conread position:
               
292-562
               

               
Cow position:
               
chr24:37975098-37974812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
293-520
               

               
Cow position:
               
chr24:31309279-31309509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
293-532
               

               
Cow position:
               
chr24:16895247-16895009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 67
               

               
Conread position:
               
293-563
               

               
Cow position:
               
chr24:32194392-32194658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
295-511
               

               
Cow position:
               
chr24:880515-880727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
295-560
               

               
Cow position:
               
chr24:43832409-43832691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
295-564
               

               
Cow position:
               
chr24:41405783-41406067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
296-497
               

               
Cow position:
               
chr24:18160252-18160041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
298-494
               

               
Cow position:
               
chr24:27900617-27900816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
299-433
               

               
Cow position:
               
chr24:21638028-21638169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
303-504
               

               
Cow position:
               
chr24:18614893-18615099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
304-563
               

               
Cow position:
               
chr24:22999910-23000173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
305-455
               

               
Cow position:
               
chr24:40823986-40824131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
305-472
               

               
Cow position:
               
chr24:21894944-21895115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
306-562
               

               
Cow position:
               
chr24:230173-230451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
306-564
               

               
Cow position:
               
chr24:28600543-28600265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 93
               

               
Conread position:
               
307-501
               

               
Cow position:
               
chr24:34496016-34496218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
311-562
               

               
Cow position:
               
chr24:28045653-28045904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
312-486
               

               
Cow position:
               
chr24:7046841-7046669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
314-543
               

               
Cow position:
               
chr24:28342261-28342510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
316-560
               

               
Cow position:
               
chr24:24532087-24532340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
322-562
               

               
Cow position:
               
chr24:2992960-2992709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
322-563
               

               
Cow position:
               
chr24:19637501-19637759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
125, 67
               

               
Conread position:
               
323-478
               

               
Cow position:
               
chr24:3160753-3160903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
323-499
               

               
Cow position:
               
chr24:40389525-40389697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr24:20733938-20734143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 78
               

               
Conread position:
               
323-562
               

               
Cow position:
               
chr24:39911119-39910860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
324-562
               

               
Cow position:
               
chr24:6151713-6151948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
324-562
               

               
Cow position:
               
chr24:13587069-13586820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
324-562
               

               
Cow position:
               
chr24:14551387-14551630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
327-497
               

               
Cow position:
               
chr24:19623780-19623947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
328-550
               

               
Cow position:
               
chr24:27202013-27202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
335-504
               

               
Cow position:
               
chr24:11007388-11007556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
336-562
               

               
Cow position:
               
chr24:23667183-23666954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
337-520
               

               
Cow position:
               
chr24:13888637-13888818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
338-560
               

               
Cow position:
               
chr24:21835028-21834794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
342-560
               

               
Cow position:
               
chr24:28355748-28355535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
167, 47
               

               
Conread position:
               
342-562
               

               
Cow position:
               
chr24:34896758-34896530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
346-503
               

               
Cow position:
               
chr24:40404865-40404714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
132, 8
               

               
Conread position:
               
347-445
               

               
Cow position:
               
chr24:33598327-33598230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
348-486
               

               
Cow position:
               
chr24:34555982-34556115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 8
               

               
Conread position:
               
348-496
               

               
Cow position:
               
chr24:42984335-42984481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
349-564
               

               
Cow position:
               
chr24:20969716-20969506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
350-562
               

               
Cow position:
               
chr24:22133117-22133337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
351-562
               

               
Cow position:
               
chr24:6427654-6427855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
351-562
               

               
Cow position:
               
chr24:26001334-26001558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
353-539
               

               
Cow position:
               
chr24:36303367-36303172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 5
               

               
Conread position:
               
353-557
               

               
Cow position:
               
chr24:11036886-11036671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
353-562
               

               
Cow position:
               
chr24:2730662-2730456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 5
               

               
Conread position:
               
354-463
               

               
Cow position:
               
chr24:27511772-27511880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
358-557
               

               
Cow position:
               
chr24:32230554-32230338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
360-510
               

               
Cow position:
               
chr24:34465550-34465400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 29
               

               
Conread position:
               
360-521
               

               
Cow position:
               
chr24:28470724-28470563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
360-562
               

               
Cow position:
               
chr24:18750660-18750881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
360-562
               

               
Cow position:
               
chr24:27448600-27448818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
361-555
               

               
Cow position:
               
chr24:22194371-22194578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
363-494
               

               
Cow position:
               
chr24:5143999-5143870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
363-503
               

               
Cow position:
               
chr24:41412335-41412199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
364-554
               

               
Cow position:
               
chr24:18668538-18668743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
367-504
               

               
Cow position:
               
chr24:15263838-15263975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
367-562
               

               
Cow position:
               
chr24:17309174-17308970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
369-562
               

               
Cow position:
               
chr24:26848766-26848570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 14
               

               
Conread position:
               
374-510
               

               
Cow position:
               
chr24:14786349-14786484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
374-563
               

               
Cow position:
               
chr24:5152493-5152698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
376-564
               

               
Cow position:
               
chr24:32891072-32890873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
383-560
               

               
Cow position:
               
chr24:18405302-18405110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
383-562
               

               
Cow position:
               
chr24:18874844-18874649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
383-562
               

               
Cow position:
               
chr24:31383097-31383279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
384-503
               

               
Cow position:
               
chr24:35469653-35469773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
385-497
               

               
Cow position:
               
chr24:33238286-33238173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr24:6156823-6157003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr24:17689632-17689440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
385-562
               

               
Cow position:
               
chr24:27810137-27810320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
385-564
               

               
Cow position:
               
chr24:36286548-36286741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
386-510
               

               
Cow position:
               
chr24:161983-162110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
387-500
               

               
Cow position:
               
chr24:29677935-29677820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
387-550
               

               
Cow position:
               
chr24:30202805-30202968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 139
               

               
Conread position:
               
387-553
               

               
Cow position:
               
chr24:21252054-21251880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
387-562
               

               
Cow position:
               
chr24:13610292-13610472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
387-563
               

               
Cow position:
               
chr24:28024260-28024439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
91, 135
               

               
Conread position:
               
388-510
               

               
Cow position:
               
chr24:22235449-22235572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
389-510
               

               
Cow position:
               
chr24:27553078-27553199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
390-504
               

               
Cow position:
               
chr24:7113206-7113321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
391-504
               

               
Cow position:
               
chr24:32818315-32818203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
392-510
               

               
Cow position:
               
chr24:29013952-29014071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
393-561
               

               
Cow position:
               
chr24:27203447-27203623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
395-561
               

               
Cow position:
               
chr24:30945594-30945421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
396-510
               

               
Cow position:
               
chr24:256016-256131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
396-563
               

               
Cow position:
               
chr24:14899746-14899913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
397-539
               

               
Cow position:
               
chr24:13058014-13058159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
397-562
               

               
Cow position:
               
chr24:25971083-25970913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
397-562
               

               
Cow position:
               
chr24:43499649-43499828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
398-510
               

               
Cow position:
               
chr24:39218560-39218447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
398-556
               

               
Cow position:
               
chr24:14729708-14729870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
399-561
               

               
Cow position:
               
chr24:27279509-27279673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
399-562
               

               
Cow position:
               
chr24:36554705-36554530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
399-564
               

               
Cow position:
               
chr24:43349643-43349474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
403-539
               

               
Cow position:
               
chr24:17060216-17060073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
405-504
               

               
Cow position:
               
chr24:43024259-43024359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
408-561
               

               
Cow position:
               
chr24:6677648-6677805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
422-563
               

               
Cow position:
               
chr24:32974581-32974432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
423-562
               

               
Cow position:
               
chr24:27719510-27719359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
429-564
               

               
Cow position:
               
chr24:24136380-24136235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
436-562
               

               
Cow position:
               
chr24:16303647-16303513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
438-562
               

               
Cow position:
               
chr24:2223180-2223050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               
Show alignments to all cow chromosomes.