Cow genome map

Conread name: Ss1.1-Pig4-TMW8055B16.3

Conread position: 116-563
Cow position: chr28:5273690-5273226 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 320
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 42

Conread position: 120-493
Cow position: chr28:34430681-34430308 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 124-489
Cow position: chr28:15044105-15043749 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 54

Conread position: 124-509
Cow position: chr28:5144772-5144388 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 124-562
Cow position: chr28:9099688-9100128 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 127-560
Cow position: chr28:11884769-11884333 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 76

Conread position: 129-367
Cow position: chr28:3104997-3105242 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 108, 5

Conread position: 129-500
Cow position: chr28:26684868-26685235 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 131-560
Cow position: chr28:5684468-5684898 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 45, 29

Conread position: 134-561
Cow position: chr28:11047347-11047793 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 298
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 139

Conread position: 136-439
Cow position: chr28:7751537-7751239 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 40, 21

Conread position: 136-492
Cow position: chr28:13176915-13176573 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 22

Conread position: 136-508
Cow position: chr28:15601027-15601406 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 11

Conread position: 137-315
Cow position: chr28:20760160-20759984 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 132

Conread position: 137-349
Cow position: chr28:24996824-24996615 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 83

Conread position: 137-386
Cow position: chr28:9390601-9390352 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 83

Conread position: 137-403
Cow position: chr28:8682087-8681813 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 66

Conread position: 137-504
Cow position: chr28:2898759-2899117 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 83

Conread position: 137-550
Cow position: chr28:11006940-11007368 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 282
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 38, 150

Conread position: 137-562
Cow position: chr28:3493020-3492587 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 305
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 20

Conread position: 139-357
Cow position: chr28:13242057-13241847 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 34, 19

Conread position: 139-413
Cow position: chr28:28076641-28076384 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 38, 21

Conread position: 139-475
Cow position: chr28:4536237-4536558 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 18

Conread position: 139-476
Cow position: chr28:13693516-13693847 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 53

Conread position: 139-497
Cow position: chr28:12619329-12619695 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 19

Conread position: 139-558
Cow position: chr28:18934220-18934631 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 82

Conread position: 139-560
Cow position: chr28:25056738-25057154 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 77

Conread position: 139-562
Cow position: chr28:11585441-11585009 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 139-562
Cow position: chr28:24672040-24672468 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 139-562
Cow position: chr28:25762795-25763200 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 56

Conread position: 139-563
Cow position: chr28:6059706-6059270 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 139-563
Cow position: chr28:22323032-22323460 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 292
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 21

Conread position: 139-563
Cow position: chr28:31648841-31649264 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 310
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 17

Conread position: 140-562
Cow position: chr28:23007958-23007542 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 140-562
Cow position: chr28:23530634-23531063 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 291
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 17

Conread position: 141-401
Cow position: chr28:15007932-15008186 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 35, 53

Conread position: 141-486
Cow position: chr28:13607655-13608008 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 16

Conread position: 141-493
Cow position: chr28:34878203-34877865 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 15

Conread position: 141-504
Cow position: chr28:5366362-5365995 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 20

Conread position: 141-562
Cow position: chr28:13267549-13267969 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 129

Conread position: 141-564
Cow position: chr28:16919393-16918972 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 17

Conread position: 142-349
Cow position: chr28:19295592-19295386 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 98

Conread position: 142-386
Cow position: chr28:26784696-26784452 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 14

Conread position: 142-406
Cow position: chr28:26269100-26269360 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 97

Conread position: 142-411
Cow position: chr28:18790781-18791050 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 15

Conread position: 142-469
Cow position: chr28:5792472-5792800 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 66

Conread position: 142-525
Cow position: chr28:8408508-8408874 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 44

Conread position: 142-554
Cow position: chr28:3914478-3914897 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 93

Conread position: 142-561
Cow position: chr28:7268167-7267750 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 45

Conread position: 143-290
Cow position: chr28:10295959-10296110 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 143-349
Cow position: chr28:34082251-34082043 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 14

Conread position: 143-354
Cow position: chr28:7980649-7980442 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 123

Conread position: 143-387
Cow position: chr28:22170948-22170697 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 73

Conread position: 143-392
Cow position: chr28:4022152-4022405 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 57

Conread position: 143-392
Cow position: chr28:23480492-23480241 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 57

Conread position: 143-409
Cow position: chr28:16243989-16243735 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 63

Conread position: 143-416
Cow position: chr28:17287994-17288255 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 64

Conread position: 143-457
Cow position: chr28:31987373-31987694 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 45

Conread position: 143-481
Cow position: chr28:11786938-11786612 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 143-485
Cow position: chr28:2862631-2862977 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 130

Conread position: 143-494
Cow position: chr28:34229999-34230346 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 98

Conread position: 143-496
Cow position: chr28:31110235-31109883 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 17

Conread position: 143-497
Cow position: chr28:22345789-22346142 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 70

Conread position: 143-504
Cow position: chr28:11752375-11752011 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 28, 129

Conread position: 143-509
Cow position: chr28:33051790-33052169 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 133

Conread position: 143-510
Cow position: chr28:4841627-4841256 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 143-510
Cow position: chr28:12430379-12430738 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 78

Conread position: 143-510
Cow position: chr28:19026233-19025871 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 74, 34

Conread position: 143-510
Cow position: chr28:19080078-19079711 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 67

Conread position: 143-510
Cow position: chr28:20313045-20313411 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 143-516
Cow position: chr28:26743392-26743765 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 143-531
Cow position: chr28:14649118-14649497 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 67

Conread position: 143-540
Cow position: chr28:26103485-26103873 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 67

Conread position: 143-546
Cow position: chr28:8022341-8021937 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 49

Conread position: 143-557
Cow position: chr28:7144558-7144995 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 303
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 30, 46

Conread position: 143-560
Cow position: chr28:23459914-23460342 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 57

Conread position: 143-561
Cow position: chr28:4282722-4282290 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 121

Conread position: 143-562
Cow position: chr28:3078908-3078496 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 80

Conread position: 143-562
Cow position: chr28:9285608-9285177 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 143-562
Cow position: chr28:9636687-9636257 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 123

Conread position: 143-562
Cow position: chr28:14657470-14657916 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 57

Conread position: 143-562
Cow position: chr28:20124555-20124981 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 91

Conread position: 143-562
Cow position: chr28:25563846-25564264 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 139

Conread position: 143-562
Cow position: chr28:26719130-26719530 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 26

Conread position: 143-562
Cow position: chr28:30293820-30293386 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 57

Conread position: 143-563
Cow position: chr28:3769885-3769482 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 50

Conread position: 143-564
Cow position: chr28:16370304-16369887 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 15

Conread position: 144-338
Cow position: chr28:10888434-10888627 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 122

Conread position: 144-352
Cow position: chr28:3077763-3077966 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 79

Conread position: 144-389
Cow position: chr28:17029945-17029703 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 90

Conread position: 144-414
Cow position: chr28:19222827-19222568 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 79

Conread position: 144-441
Cow position: chr28:4914331-4914027 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 32, 127

Conread position: 144-441
Cow position: chr28:22485019-22485317 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 20

Conread position: 144-445
Cow position: chr28:25070887-25071188 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 62

Conread position: 144-459
Cow position: chr28:7512821-7512502 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 56

Conread position: 144-460
Cow position: chr28:14151005-14151305 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 81

Conread position: 144-460
Cow position: chr28:15272490-15272190 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 56

Conread position: 144-492
Cow position: chr28:14933732-14934074 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 126

Conread position: 144-494
Cow position: chr28:11818191-11817846 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 94

Conread position: 144-495
Cow position: chr28:23675914-23676257 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 63

Conread position: 144-498
Cow position: chr28:7549292-7548936 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 226
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 117

Conread position: 144-503
Cow position: chr28:18354548-18354200 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 144-504
Cow position: chr28:19222375-19222022 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 129

Conread position: 144-509
Cow position: chr28:21354995-21355364 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 144-510
Cow position: chr28:6971569-6971214 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 66

Conread position: 144-510
Cow position: chr28:16109715-16110071 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 80

Conread position: 144-546
Cow position: chr28:7684907-7684533 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 33

Conread position: 144-555
Cow position: chr28:20963762-20963354 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 287
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 130

Conread position: 144-556
Cow position: chr28:14997834-14998258 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 32

Conread position: 144-560
Cow position: chr28:2819529-2819963 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 137

Conread position: 144-560
Cow position: chr28:7698212-7697781 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 59

Conread position: 144-562
Cow position: chr28:11426775-11426348 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 144-562
Cow position: chr28:21502165-21502582 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 144-562
Cow position: chr28:22132697-22133108 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 296
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 90

Conread position: 144-562
Cow position: chr28:25249126-25249535 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 144-562
Cow position: chr28:33036695-33036285 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 285
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 45

Conread position: 144-563
Cow position: chr28:13474076-13474500 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 300
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 66

Conread position: 144-563
Cow position: chr28:23410553-23410133 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 144-563
Cow position: chr28:30608411-30607996 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 280
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 93

Conread position: 144-564
Cow position: chr28:5074733-5074319 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 280
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 14

Conread position: 145-499
Cow position: chr28:26922594-26922245 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 76

Conread position: 145-502
Cow position: chr28:29199495-29199856 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 71

Conread position: 145-504
Cow position: chr28:14234742-14235080 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 77

Conread position: 146-386
Cow position: chr28:12987173-12987419 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 29

Conread position: 147-346
Cow position: chr28:11451693-11451493 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 73

Conread position: 147-355
Cow position: chr28:11827267-11827468 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 73

Conread position: 147-392
Cow position: chr28:5773413-5773653 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 29, 63

Conread position: 147-392
Cow position: chr28:6307665-6307909 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 29, 39

Conread position: 147-416
Cow position: chr28:16253084-16252817 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 76

Conread position: 147-417
Cow position: chr28:17316632-17316905 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 30, 182

Conread position: 147-441
Cow position: chr28:12758735-12758436 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 30, 124

Conread position: 147-443
Cow position: chr28:4587870-4588163 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 43

Conread position: 147-487
Cow position: chr28:7228611-7228280 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 147-488
Cow position: chr28:21380648-21380992 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 147-510
Cow position: chr28:21104073-21103696 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 147-529
Cow position: chr28:5236829-5236452 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 268
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 64

Conread position: 147-535
Cow position: chr28:16085098-16085484 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 147-554
Cow position: chr28:13865619-13866015 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 52

Conread position: 147-555
Cow position: chr28:5817621-5818031 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 147-558
Cow position: chr28:24343141-24343549 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 147-560
Cow position: chr28:3144118-3143687 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 73

Conread position: 147-560
Cow position: chr28:5203973-5204383 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 73

Conread position: 147-560
Cow position: chr28:21844729-21845149 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 126

Conread position: 147-561
Cow position: chr28:27218094-27218524 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 147-561
Cow position: chr28:33163694-33163277 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 291
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 27, 124

Conread position: 147-562
Cow position: chr28:750997-751428 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 147-562
Cow position: chr28:8347508-8347934 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 147-562
Cow position: chr28:9426569-9426152 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 51

Conread position: 147-562
Cow position: chr28:10053565-10053132 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 54

Conread position: 147-562
Cow position: chr28:21868225-21868657 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 127

Conread position: 147-564
Cow position: chr28:5826722-5827133 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 148-393
Cow position: chr28:10478568-10478325 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 51

Conread position: 148-460
Cow position: chr28:10744984-10745297 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 28, 72

Conread position: 148-497
Cow position: chr28:28163865-28164205 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 14, 92

Conread position: 149-539
Cow position: chr28:30303419-30303034 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 50

Conread position: 149-556
Cow position: chr28:25701085-25700676 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 70

Conread position: 150-437
Cow position: chr28:3256570-3256858 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 127

Conread position: 150-517
Cow position: chr28:4090265-4089915 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 181, 25

Conread position: 150-564
Cow position: chr28:26614665-26615055 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 289
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 35

Conread position: 151-351
Cow position: chr28:9108220-9108422 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 9

Conread position: 152-354
Cow position: chr28:2124209-2124407 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 72

Conread position: 153-562
Cow position: chr28:23793522-23793120 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 5

Conread position: 154-347
Cow position: chr28:5188621-5188433 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 66

Conread position: 154-350
Cow position: chr28:8348872-8348678 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 119

Conread position: 154-387
Cow position: chr28:7590401-7590169 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 20, 41

Conread position: 154-387
Cow position: chr28:15375045-15374811 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 116

Conread position: 154-409
Cow position: chr28:25424522-25424262 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 104

Conread position: 154-457
Cow position: chr28:10529702-10529410 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 154-457
Cow position: chr28:11687252-11686948 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 21, 112

Conread position: 154-460
Cow position: chr28:26533323-26533626 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 47

Conread position: 154-472
Cow position: chr28:18625003-18625329 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 47

Conread position: 154-486
Cow position: chr28:16204552-16204225 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 120

Conread position: 154-534
Cow position: chr28:3408437-3408053 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 179

Conread position: 154-562
Cow position: chr28:4016310-4016723 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 124

Conread position: 154-562
Cow position: chr28:25727158-25727568 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 22, 52

Conread position: 154-563
Cow position: chr28:5931134-5931545 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 154-564
Cow position: chr28:4070749-4071160 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 295
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 53

Conread position: 157-392
Cow position: chr28:4880480-4880247 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 56

Conread position: 157-438
Cow position: chr28:2738028-2737745 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 19, 109

Conread position: 157-460
Cow position: chr28:34442980-34442675 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 216
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 115

Conread position: 157-510
Cow position: chr28:22321205-22321552 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 121

Conread position: 157-539
Cow position: chr28:21598470-21598096 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 34

Conread position: 159-562
Cow position: chr28:3745987-3746397 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 115

Conread position: 159-562
Cow position: chr28:28766124-28765703 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 160-457
Cow position: chr28:20265175-20265480 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 97

Conread position: 160-462
Cow position: chr28:16686819-16687111 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 72

Conread position: 160-503
Cow position: chr28:1837777-1838112 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 17, 61

Conread position: 161-460
Cow position: chr28:12946725-12947032 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 39

Conread position: 162-562
Cow position: chr28:25973318-25973742 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 38

Conread position: 163-390
Cow position: chr28:5768984-5769213 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 75

Conread position: 163-478
Cow position: chr28:7723606-7723289 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 107

Conread position: 164-562
Cow position: chr28:4884476-4884053 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 105

Conread position: 167-459
Cow position: chr28:27313954-27313650 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 32

Conread position: 168-562
Cow position: chr28:4809590-4809970 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 104

Conread position: 172-564
Cow position: chr28:4643968-4643568 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 173-473
Cow position: chr28:26418945-26418646 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 200
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 95

Conread position: 173-479
Cow position: chr28:23721134-23721432 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 100

Conread position: 174-449
Cow position: chr28:27683903-27683627 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 94

Conread position: 174-450
Cow position: chr28:19054819-19055086 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 177, 65

Conread position: 174-473
Cow position: chr28:11931583-11931280 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 90

Conread position: 174-478
Cow position: chr28:9267903-9268208 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 94

Conread position: 174-499
Cow position: chr28:16770385-16770712 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 25

Conread position: 174-526
Cow position: chr28:28631525-28631886 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 13

Conread position: 175-438
Cow position: chr28:11380239-11379979 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 102

Conread position: 175-503
Cow position: chr28:5224516-5224826 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 168, 61

Conread position: 175-509
Cow position: chr28:29434621-29434295 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 62, 44

Conread position: 175-520
Cow position: chr28:4138866-4138525 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 64, 47

Conread position: 175-554
Cow position: chr28:9176950-9176586 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 87

Conread position: 175-562
Cow position: chr28:10844922-10845302 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 24

Conread position: 176-494
Cow position: chr28:7416204-7415892 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 32

Conread position: 177-434
Cow position: chr28:3714607-3714858 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 31

Conread position: 177-434
Cow position: chr28:4057792-4058039 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 147, 11

Conread position: 177-496
Cow position: chr28:5128924-5128607 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 90

Conread position: 177-562
Cow position: chr28:4881440-4881049 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 177-562
Cow position: chr28:10669380-10669787 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 60

Conread position: 178-503
Cow position: chr28:16418979-16419302 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 101, 40

Conread position: 179-412
Cow position: chr28:25459333-25459569 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 32, 58

Conread position: 184-504
Cow position: chr28:26982934-26982610 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 173

Conread position: 184-504
Cow position: chr28:33884220-33884529 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 183, 51

Conread position: 184-562
Cow position: chr28:23724643-23724269 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 52

Conread position: 185-554
Cow position: chr28:2523736-2524134 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 10

Conread position: 187-392
Cow position: chr28:19023948-19024162 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 86

Conread position: 187-426
Cow position: chr28:22279377-22279151 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 119, 31

Conread position: 187-562
Cow position: chr28:11866854-11866468 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 84

Conread position: 187-564
Cow position: chr28:6091175-6091558 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 41, 77

Conread position: 188-510
Cow position: chr28:4835029-4834711 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 50, 82

Conread position: 188-561
Cow position: chr28:5437275-5436887 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 83

Conread position: 190-504
Cow position: chr28:12400023-12400362 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 10, 39

Conread position: 192-510
Cow position: chr28:10999851-10999545 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 113, 12

Conread position: 193-460
Cow position: chr28:14720957-14720701 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 34

Conread position: 194-504
Cow position: chr28:4158778-4159083 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 14

Conread position: 197-325
Cow position: chr28:26264629-26264752 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 197-392
Cow position: chr28:118230-118033 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 50

Conread position: 197-445
Cow position: chr28:24368114-24367874 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 23

Conread position: 197-460
Cow position: chr28:16416465-16416725 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 29

Conread position: 197-469
Cow position: chr28:25283029-25283286 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 80

Conread position: 197-494
Cow position: chr28:14710167-14710456 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 45

Conread position: 197-520
Cow position: chr28:3406608-3406270 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 65

Conread position: 197-560
Cow position: chr28:2132097-2131744 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 198-499
Cow position: chr28:13245372-13245684 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 47

Conread position: 199-457
Cow position: chr28:17235901-17235656 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 23

Conread position: 199-509
Cow position: chr28:2961004-2960696 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 126, 34

Conread position: 199-563
Cow position: chr28:5475206-5474850 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 250
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 53

Conread position: 201-419
Cow position: chr28:15943978-15944196 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 79

Conread position: 201-555
Cow position: chr28:2752671-2752317 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 70

Conread position: 202-390
Cow position: chr28:23869296-23869485 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 69

Conread position: 202-443
Cow position: chr28:12367611-12367852 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 68

Conread position: 204-564
Cow position: chr28:10606802-10606436 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 68

Conread position: 206-411
Cow position: chr28:28903838-28903629 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 65

Conread position: 208-510
Cow position: chr28:29989280-29988977 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 62

Conread position: 208-563
Cow position: chr28:22308481-22308845 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 63

Conread position: 209-416
Cow position: chr28:22338832-22339033 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 31

Conread position: 209-502
Cow position: chr28:18760214-18759929 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 70

Conread position: 209-520
Cow position: chr28:10906911-10907228 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 62

Conread position: 209-562
Cow position: chr28:661947-662300 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 209-562
Cow position: chr28:8291269-8291613 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 69

Conread position: 210-383
Cow position: chr28:8656906-8656738 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 8

Conread position: 210-392
Cow position: chr28:22739632-22739809 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 116, 26

Conread position: 210-449
Cow position: chr28:7501189-7500959 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 13

Conread position: 210-499
Cow position: chr28:20409227-20409509 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 29, 61

Conread position: 210-554
Cow position: chr28:21363581-21363932 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 57

Conread position: 210-558
Cow position: chr28:13527038-13527394 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 60

Conread position: 211-562
Cow position: chr28:4308068-4307693 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 14

Conread position: 211-562
Cow position: chr28:30327255-30326901 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 60

Conread position: 211-564
Cow position: chr28:32365681-32366020 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 18

Conread position: 213-513
Cow position: chr28:15538851-15538558 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 23

Conread position: 213-562
Cow position: chr28:616221-616569 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 62

Conread position: 214-562
Cow position: chr28:12951267-12951616 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 215-503
Cow position: chr28:4440143-4440423 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 49

Conread position: 215-504
Cow position: chr28:25806411-25806691 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 61

Conread position: 215-507
Cow position: chr28:1632815-1632526 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 215-564
Cow position: chr28:21046728-21046387 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 56

Conread position: 216-491
Cow position: chr28:21570028-21570303 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 57

Conread position: 217-503
Cow position: chr28:8358746-8359024 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 50

Conread position: 220-562
Cow position: chr28:10057747-10057387 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 49

Conread position: 222-563
Cow position: chr28:24082117-24082471 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 17

Conread position: 223-501
Cow position: chr28:14512370-14512659 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 53

Conread position: 223-557
Cow position: chr28:25399729-25400062 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 46

Conread position: 224-562
Cow position: chr28:10589196-10588833 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 100

Conread position: 224-562
Cow position: chr28:10616113-10615750 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 79

Conread position: 224-562
Cow position: chr28:30746879-30746538 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 39

Conread position: 225-476
Cow position: chr28:18186403-18186655 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 47

Conread position: 225-564
Cow position: chr28:25728049-25728384 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 50

Conread position: 228-562
Cow position: chr28:22571809-22571484 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 8

Conread position: 230-510
Cow position: chr28:4355403-4355680 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 78

Conread position: 231-383
Cow position: chr28:5838394-5838547 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 46

Conread position: 233-511
Cow position: chr28:27161472-27161194 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 37

Conread position: 236-562
Cow position: chr28:19262726-19262384 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 93, 35

Conread position: 239-562
Cow position: chr28:3449165-3449509 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 31

Conread position: 239-562
Cow position: chr28:14494704-14495003 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 222
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 239, 31

Conread position: 240-383
Cow position: chr28:1096188-1096318 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 240-510
Cow position: chr28:9812150-9812405 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 32

Conread position: 241-504
Cow position: chr28:8140350-8140610 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 92, 28

Conread position: 241-530
Cow position: chr28:1538036-1538312 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 29

Conread position: 244-486
Cow position: chr28:30234262-30234490 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 24

Conread position: 245-562
Cow position: chr28:11346613-11346289 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 24

Conread position: 246-401
Cow position: chr28:33894138-33893986 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 24

Conread position: 246-494
Cow position: chr28:7372255-7372004 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 82, 145

Conread position: 247-563
Cow position: chr28:5193193-5193524 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 27

Conread position: 253-502
Cow position: chr28:17398351-17398108 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 40

Conread position: 253-502
Cow position: chr28:17414592-17414349 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 40

Conread position: 257-472
Cow position: chr28:17071210-17071432 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 136

Conread position: 260-543
Cow position: chr28:17601994-17601715 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 85

Conread position: 261-431
Cow position: chr28:23447942-23447770 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 118

Conread position: 261-563
Cow position: chr28:32370993-32370690 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 136

Conread position: 262-509
Cow position: chr28:17601667-17601421 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 62

Conread position: 262-563
Cow position: chr28:19564345-19564034 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 40

Conread position: 263-562
Cow position: chr28:3011389-3011067 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 265-510
Cow position: chr28:8258712-8258958 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 96
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 213, 0

Conread position: 267-498
Cow position: chr28:5166654-5166889 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 129

Conread position: 267-562
Cow position: chr28:3484465-3484786 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 60, 129

Conread position: 269-537
Cow position: chr28:26055365-26055650 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 129

Conread position: 269-561
Cow position: chr28:32593759-32593435 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 269-562
Cow position: chr28:7009087-7008781 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 95

Conread position: 270-451
Cow position: chr28:12363270-12363083 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 127

Conread position: 270-551
Cow position: chr28:18370117-18369824 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 51, 120

Conread position: 270-556
Cow position: chr28:12933840-12933542 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 270-560
Cow position: chr28:12672570-12672263 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 32

Conread position: 270-561
Cow position: chr28:23296214-23296518 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 14, 92

Conread position: 270-562
Cow position: chr28:5199713-5200027 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 90

Conread position: 271-560
Cow position: chr28:32366345-32366073 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 35

Conread position: 272-510
Cow position: chr28:6358517-6358281 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 30

Conread position: 278-493
Cow position: chr28:25195612-25195819 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 67

Conread position: 278-504
Cow position: chr28:11307609-11307389 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 82, 54

Conread position: 278-504
Cow position: chr28:32174528-32174757 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 102

Conread position: 278-504
Cow position: chr28:34248124-34247903 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 48, 60

Conread position: 278-562
Cow position: chr28:10495382-10495100 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 95, 36

Conread position: 279-514
Cow position: chr28:10981077-10981315 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 71

Conread position: 283-398
Cow position: chr28:20968956-20968839 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 103

Conread position: 284-498
Cow position: chr28:16246158-16245943 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 36

Conread position: 284-504
Cow position: chr28:30865325-30865545 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 108

Conread position: 284-564
Cow position: chr28:1099755-1099475 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 104

Conread position: 285-561
Cow position: chr28:8513561-8513309 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 36

Conread position: 288-500
Cow position: chr28:8147953-8147740 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 70

Conread position: 290-560
Cow position: chr28:7540249-7539979 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 100

Conread position: 293-508
Cow position: chr28:25677433-25677209 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 96

Conread position: 293-510
Cow position: chr28:7388854-7388638 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 15, 103

Conread position: 293-545
Cow position: chr28:11559720-11559453 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 106

Conread position: 293-563
Cow position: chr28:10297776-10298040 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 32, 9

Conread position: 295-481
Cow position: chr28:18710367-18710558 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 94

Conread position: 295-530
Cow position: chr28:24706819-24707052 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 28, 56

Conread position: 296-555
Cow position: chr28:4045769-4046037 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 55, 35

Conread position: 296-559
Cow position: chr28:7350574-7350847 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 53

Conread position: 297-560
Cow position: chr28:4181921-4182199 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 48

Conread position: 301-510
Cow position: chr28:3161032-3160821 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 27, 91

Conread position: 303-564
Cow position: chr28:7156764-7157014 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 29

Conread position: 307-564
Cow position: chr28:22813188-22813450 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 88

Conread position: 308-562
Cow position: chr28:28809885-28810156 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 77

Conread position: 309-552
Cow position: chr28:20397437-20397176 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 81

Conread position: 311-564
Cow position: chr28:4013020-4013285 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 32

Conread position: 312-562
Cow position: chr28:17012355-17012105 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 138, 36

Conread position: 313-533
Cow position: chr28:7437522-7437317 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 165, 43

Conread position: 316-562
Cow position: chr28:6935242-6934976 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 78, 35

Conread position: 319-561
Cow position: chr28:10888581-10888824 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 219, 70

Conread position: 323-499
Cow position: chr28:20759754-20759579 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 69

Conread position: 323-504
Cow position: chr28:7776556-7776373 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 99

Conread position: 323-553
Cow position: chr28:7805477-7805254 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 59

Conread position: 323-556
Cow position: chr28:5650790-5650552 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 72

Conread position: 323-562
Cow position: chr28:4823554-4823801 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 179, 25

Conread position: 323-562
Cow position: chr28:33322401-33322652 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 64

Conread position: 324-562
Cow position: chr28:6283538-6283290 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 32, 17

Conread position: 324-562
Cow position: chr28:11059451-11059691 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 31

Conread position: 325-503
Cow position: chr28:4765625-4765804 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 112, 29

Conread position: 325-503
Cow position: chr28:8149676-8149505 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 153, 13

Conread position: 325-562
Cow position: chr28:7619203-7618960 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 67

Conread position: 326-562
Cow position: chr28:10977793-10978038 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 43

Conread position: 327-503
Cow position: chr28:34843623-34843448 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 59

Conread position: 327-562
Cow position: chr28:3726262-3726008 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 327-564
Cow position: chr28:10958746-10959001 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 27

Conread position: 327-564
Cow position: chr28:11815127-11814877 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 57

Conread position: 329-560
Cow position: chr28:5235835-5236072 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 27

Conread position: 333-558
Cow position: chr28:7498192-7497969 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 59

Conread position: 333-563
Cow position: chr28:19216778-19217013 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 335-556
Cow position: chr28:2279631-2279408 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 50

Conread position: 336-502
Cow position: chr28:19295167-19295008 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 149, 7

Conread position: 338-562
Cow position: chr28:4185871-4186103 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 17

Conread position: 339-564
Cow position: chr28:17680584-17680827 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 52

Conread position: 340-510
Cow position: chr28:2772678-2772844 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 45

Conread position: 340-562
Cow position: chr28:9294526-9294311 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 138, 10

Conread position: 340-562
Cow position: chr28:11987139-11987363 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 59

Conread position: 340-562
Cow position: chr28:12055377-12055601 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 54, 59

Conread position: 340-562
Cow position: chr28:17739790-17740025 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 138, 49

Conread position: 342-510
Cow position: chr28:3200427-3200593 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 137, 9

Conread position: 345-564
Cow position: chr28:4937272-4937037 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 44

Conread position: 347-482
Cow position: chr28:19345222-19345355 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 47, 52

Conread position: 348-510
Cow position: chr28:32179671-32179828 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 10

Conread position: 348-562
Cow position: chr28:5630071-5630299 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 129, 41

Conread position: 348-562
Cow position: chr28:21008692-21008471 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 130, 35

Conread position: 350-511
Cow position: chr28:5867702-5867855 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 126, 40

Conread position: 350-543
Cow position: chr28:555479-555674 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 127, 41

Conread position: 351-504
Cow position: chr28:13356391-13356243 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 81, 34

Conread position: 351-530
Cow position: chr28:18770060-18770234 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 127, 32

Conread position: 351-561
Cow position: chr28:26372718-26372920 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 127, 38

Conread position: 351-562
Cow position: chr28:5205247-5205451 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 44

Conread position: 351-564
Cow position: chr28:12991112-12991337 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 353-504
Cow position: chr28:23047598-23047746 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 34

Conread position: 354-562
Cow position: chr28:11398818-11398594 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 40

Conread position: 355-530
Cow position: chr28:5552735-5552563 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 122, 28

Conread position: 355-562
Cow position: chr28:5231918-5232140 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 34

Conread position: 358-564
Cow position: chr28:8259611-8259834 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 31

Conread position: 360-503
Cow position: chr28:13048298-13048157 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 29

Conread position: 361-539
Cow position: chr28:9384301-9384117 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 105, 28

Conread position: 362-507
Cow position: chr28:10163787-10163928 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 27

Conread position: 363-562
Cow position: chr28:15362567-15362778 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 26

Conread position: 363-562
Cow position: chr28:17949125-17948917 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 20

Conread position: 363-564
Cow position: chr28:4101508-4101714 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 0

Conread position: 365-563
Cow position: chr28:19039029-19038817 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 20

Conread position: 366-492
Cow position: chr28:8102953-8102829 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 11

Conread position: 366-561
Cow position: chr28:18797311-18797509 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 23

Conread position: 366-564
Cow position: chr28:16214882-16214683 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 172, 23

Conread position: 367-504
Cow position: chr28:24064903-24064771 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 367-562
Cow position: chr28:8396327-8396525 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 111, 22

Conread position: 367-562
Cow position: chr28:24996621-24996418 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 128, 22

Conread position: 367-563
Cow position: chr28:5188437-5188228 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 76, 22

Conread position: 371-554
Cow position: chr28:16879569-16879760 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 18

Conread position: 371-561
Cow position: chr28:5441901-5441698 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 18

Conread position: 374-555
Cow position: chr28:11411537-11411346 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 25

Conread position: 374-563
Cow position: chr28:17728100-17727911 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 104, 15

Conread position: 375-554
Cow position: chr28:11451492-11451313 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 19

Conread position: 375-564
Cow position: chr28:21207368-21207175 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 88, 14

Conread position: 376-562
Cow position: chr28:26784240-26784056 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 102, 14

Conread position: 377-503
Cow position: chr28:29042052-29041927 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 12

Conread position: 377-563
Cow position: chr28:26960909-26960712 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 14

Conread position: 380-536
Cow position: chr28:34097612-34097457 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 111, 28

Conread position: 382-562
Cow position: chr28:117758-117558 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 69

Conread position: 383-497
Cow position: chr28:5152607-5152722 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 383-504
Cow position: chr28:8167344-8167226 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 20

Conread position: 383-538
Cow position: chr28:22630018-22630177 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 384-501
Cow position: chr28:9418959-9418841 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 384-529
Cow position: chr28:8716380-8716237 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 11

Conread position: 384-537
Cow position: chr28:10247496-10247643 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 385-488
Cow position: chr28:16388914-16389018 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 385-499
Cow position: chr28:4073977-4074092 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 385-502
Cow position: chr28:20013443-20013563 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 385-510
Cow position: chr28:2743089-2743216 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 385-557
Cow position: chr28:20046561-20046737 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 48

Conread position: 385-562
Cow position: chr28:4022681-4022871 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 92, 166

Conread position: 385-562
Cow position: chr28:7333595-7333765 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 128

Conread position: 385-562
Cow position: chr28:14242701-14242896 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 386-498
Cow position: chr28:16691932-16692045 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 386-562
Cow position: chr28:32014793-32014985 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 387-504
Cow position: chr28:19024443-19024561 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 387-509
Cow position: chr28:26820266-26820148 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 9

Conread position: 387-562
Cow position: chr28:9109226-9109411 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 388-509
Cow position: chr28:18533895-18533774 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 90, 103

Conread position: 388-510
Cow position: chr28:12385282-12385158 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 390-527
Cow position: chr28:659282-659145 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 117

Conread position: 390-564
Cow position: chr28:26574422-26574602 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 9

Conread position: 391-562
Cow position: chr28:5673889-5674072 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 391-562
Cow position: chr28:20281772-20281948 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 109, 63

Conread position: 392-562
Cow position: chr28:3423792-3423977 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 392-562
Cow position: chr28:11827703-11827888 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 25

Conread position: 393-504
Cow position: chr28:11365511-11365401 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 395-562
Cow position: chr28:10196847-10196670 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 395-564
Cow position: chr28:8681408-8681235 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 17

Conread position: 396-560
Cow position: chr28:22085523-22085347 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 398-562
Cow position: chr28:7964657-7964478 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 398-564
Cow position: chr28:31996588-31996753 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 19

Conread position: 399-560
Cow position: chr28:3678384-3678557 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 399-562
Cow position: chr28:4027440-4027269 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 19

Conread position: 399-562
Cow position: chr28:5805688-5805862 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 399-564
Cow position: chr28:8516161-8515993 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 19

Conread position: 407-562
Cow position: chr28:21744745-21744912 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 413-510
Cow position: chr28:25518728-25518631 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 5

Conread position: 413-562
Cow position: chr28:9677705-9677863 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 417-514
Cow position: chr28:24726397-24726299 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 421-560
Cow position: chr28:8616876-8617014 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 78

Conread position: 429-562
Cow position: chr28:21263209-21263354 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 429-563
Cow position: chr28:12691209-12691345 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 49, 110

Show alignments to all cow chromosomes.