Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055B16.3
        

               Conread position:
               125-553
               

               Cow position:
               chr29:4520080-4520517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               130-561
               

               Cow position:
               chr29:34773978-34773556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               302
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               131-474
               

               Cow position:
               chr29:41364863-41365199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               131-510
               

               Cow position:
               chr29:24623998-24624374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 129
               

               Conread position:
               131-562
               

               Cow position:
               chr29:19949060-19949499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               304
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               135-562
               

               Cow position:
               chr29:23697733-23698164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               136-445
               

               Cow position:
               chr29:24119981-24119681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 126
               

               Conread position:
               136-510
               

               Cow position:
               chr29:22714972-22714597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               40, 136
               

               Conread position:
               136-564
               

               Cow position:
               chr29:19762029-19762459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 22
               

               Conread position:
               137-437
               

               Cow position:
               chr29:477860-478161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               137-476
               

               Cow position:
               chr29:13553889-13554228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 135
               

               Conread position:
               137-502
               

               Cow position:
               chr29:24292633-24292988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 40
               

               Conread position:
               137-504
               

               Cow position:
               chr29:36216875-36217233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               137-509
               

               Cow position:
               chr29:20626334-20626695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               137-556
               

               Cow position:
               chr29:18878744-18878294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 84
               

               Conread position:
               137-562
               

               Cow position:
               chr29:34745897-34745467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               137-562
               

               Cow position:
               chr29:41530607-41531045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               138-457
               

               Cow position:
               chr29:24103791-24103468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               138-562
               

               Cow position:
               chr29:699856-699434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               139-350
               

               Cow position:
               chr29:21000400-21000614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               139-391
               

               Cow position:
               chr29:11696293-11696539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               139-413
               

               Cow position:
               chr29:32767761-32767504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               139-451
               

               Cow position:
               chr29:35485004-35485313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               139-452
               

               Cow position:
               chr29:27009178-27009484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               139-480
               

               Cow position:
               chr29:23984204-23983858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 139
               

               Conread position:
               139-482
               

               Cow position:
               chr29:9638552-9638222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               139-494
               

               Cow position:
               chr29:17607176-17607527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               139-499
               

               Cow position:
               chr29:6217788-6217429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               139-504
               

               Cow position:
               chr29:34744859-34744508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               139-510
               

               Cow position:
               chr29:11704881-11705240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               139-555
               

               Cow position:
               chr29:39111548-39111137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               139-561
               

               Cow position:
               chr29:7956224-7955795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               139-562
               

               Cow position:
               chr29:17109730-17110147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               139-563
               

               Cow position:
               chr29:6925778-6926176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 69
               

               Conread position:
               139-563
               

               Cow position:
               chr29:10653107-10653517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               297
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               139-564
               

               Cow position:
               chr29:18072689-18073114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               283
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               139-564
               

               Cow position:
               chr29:25737657-25737224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               140-441
               

               Cow position:
               chr29:17131848-17131562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               140-478
               

               Cow position:
               chr29:24659341-24659004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               140-489
               

               Cow position:
               chr29:19254063-19253723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               140-562
               

               Cow position:
               chr29:7041075-7040674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               94, 37
               

               Conread position:
               140-562
               

               Cow position:
               chr29:23874219-23874656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               140-562
               

               Cow position:
               chr29:28195756-28195339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               141-307
               

               Cow position:
               chr29:13458819-13458980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               141-409
               

               Cow position:
               chr29:2522338-2522590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               141-510
               

               Cow position:
               chr29:13639606-13639239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               141-558
               

               Cow position:
               chr29:4367481-4367894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               141-562
               

               Cow position:
               chr29:15940875-15940463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               141-562
               

               Cow position:
               chr29:22162490-22162070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               141-562
               

               Cow position:
               chr29:43328400-43328826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               141-563
               

               Cow position:
               chr29:28197245-28196825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               142-484
               

               Cow position:
               chr29:28868394-28868744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               142-485
               

               Cow position:
               chr29:27833750-27834088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               142-499
               

               Cow position:
               chr29:16195613-16195956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               142-510
               

               Cow position:
               chr29:4194359-4194001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               142-561
               

               Cow position:
               chr29:26778647-26779069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               143-402
               

               Cow position:
               chr29:35738507-35738254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               143-403
               

               Cow position:
               chr29:44901939-44901685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 32
               

               Conread position:
               143-406
               

               Cow position:
               chr29:9686238-9685983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               143-441
               

               Cow position:
               chr29:18735879-18735582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               143-452
               

               Cow position:
               chr29:9139171-9139489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               143-456
               

               Cow position:
               chr29:15944333-15944631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               143-457
               

               Cow position:
               chr29:40166005-40166317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               143-458
               

               Cow position:
               chr29:28883843-28884155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 59
               

               Conread position:
               143-472
               

               Cow position:
               chr29:36586342-36586655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               143-476
               

               Cow position:
               chr29:26263614-26263928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               143-484
               

               Cow position:
               chr29:5098998-5098665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               143-493
               

               Cow position:
               chr29:17409092-17409445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               143-494
               

               Cow position:
               chr29:650038-650385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               143-494
               

               Cow position:
               chr29:13372427-13372774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               143-494
               

               Cow position:
               chr29:20903525-20903179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               143-494
               

               Cow position:
               chr29:27858555-27858898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               143-494
               

               Cow position:
               chr29:35406031-35405681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               143-495
               

               Cow position:
               chr29:6014866-6015238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               143-495
               

               Cow position:
               chr29:31786441-31786786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               30, 46
               

               Conread position:
               143-499
               

               Cow position:
               chr29:20429210-20428851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               143-503
               

               Cow position:
               chr29:1933794-1933451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               143-503
               

               Cow position:
               chr29:40891939-40891586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               143-504
               

               Cow position:
               chr29:7666268-7665895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               143-504
               

               Cow position:
               chr29:32290366-32290733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               143-508
               

               Cow position:
               chr29:11562377-11562732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 97
               

               Conread position:
               143-510
               

               Cow position:
               chr29:7966010-7966372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               143-510
               

               Cow position:
               chr29:25088516-25088871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               143-522
               

               Cow position:
               chr29:32799940-32799571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 72
               

               Conread position:
               143-530
               

               Cow position:
               chr29:12784192-12783817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 91
               

               Conread position:
               143-542
               

               Cow position:
               chr29:29056947-29057347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               143-548
               

               Cow position:
               chr29:17342-16958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               143-552
               

               Cow position:
               chr29:31926527-31926133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 43
               

               Conread position:
               143-558
               

               Cow position:
               chr29:21443581-21443151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               143-561
               

               Cow position:
               chr29:12679918-12680351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               302
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               143-562
               

               Cow position:
               chr29:707182-706781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               143-562
               

               Cow position:
               chr29:19756211-19756631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               143-562
               

               Cow position:
               chr29:21196887-21196458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               143-562
               

               Cow position:
               chr29:26615962-26615547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               289
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 82
               

               Conread position:
               143-562
               

               Cow position:
               chr29:36530626-36531060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               34, 134
               

               Conread position:
               143-563
               

               Cow position:
               chr29:26017748-26017305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               143-563
               

               Cow position:
               chr29:34360031-34359629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 34
               

               Conread position:
               144-403
               

               Cow position:
               chr29:20178361-20178115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 92
               

               Conread position:
               144-423
               

               Cow position:
               chr29:37785415-37785133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 187
               

               Conread position:
               144-425
               

               Cow position:
               chr29:21534914-21534631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               144-426
               

               Cow position:
               chr29:5919561-5919292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               144-430
               

               Cow position:
               chr29:3502320-3502617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 135
               

               Conread position:
               144-437
               

               Cow position:
               chr29:36183039-36183334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 45
               

               Conread position:
               144-443
               

               Cow position:
               chr29:18212219-18211939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               144-448
               

               Cow position:
               chr29:2071805-2071507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               144-452
               

               Cow position:
               chr29:26771204-26771508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               144-460
               

               Cow position:
               chr29:1307100-1306784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               144-460
               

               Cow position:
               chr29:19389250-19389554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               144-464
               

               Cow position:
               chr29:26130547-26130854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               144-478
               

               Cow position:
               chr29:32521632-32521964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               250
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               32, 121
               

               Conread position:
               144-480
               

               Cow position:
               chr29:20933469-20933809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               144-485
               

               Cow position:
               chr29:465638-465298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               144-489
               

               Cow position:
               chr29:21933349-21933015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               144-498
               

               Cow position:
               chr29:13615879-13615540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               144-500
               

               Cow position:
               chr29:25333690-25333344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               144-503
               

               Cow position:
               chr29:16609502-16609868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               144-504
               

               Cow position:
               chr29:6286393-6286040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               144-504
               

               Cow position:
               chr29:17222172-17222536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 129
               

               Conread position:
               144-504
               

               Cow position:
               chr29:44378655-44378298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               144-510
               

               Cow position:
               chr29:6844866-6844505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               144-510
               

               Cow position:
               chr29:8926695-8926334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 120
               

               Conread position:
               144-510
               

               Cow position:
               chr29:38581732-38582095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               144-511
               

               Cow position:
               chr29:35459006-35458645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 14
               

               Conread position:
               144-560
               

               Cow position:
               chr29:35501885-35501473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               144-561
               

               Cow position:
               chr29:10456789-10456392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               144-561
               

               Cow position:
               chr29:34297801-34297378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               306
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               144-562
               

               Cow position:
               chr29:109473-109864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               144-562
               

               Cow position:
               chr29:4120609-4121050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               144-562
               

               Cow position:
               chr29:4875139-4874696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 161
               

               Conread position:
               144-562
               

               Cow position:
               chr29:6635868-6636272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               144-563
               

               Cow position:
               chr29:24952449-24952882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               144-563
               

               Cow position:
               chr29:32963318-32963718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               144-564
               

               Cow position:
               chr29:18021911-18021506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               145-502
               

               Cow position:
               chr29:4480411-4480054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               31, 121
               

               Conread position:
               145-563
               

               Cow position:
               chr29:31928742-31929181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               146-510
               

               Cow position:
               chr29:45005853-45005502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               147-271
               

               Cow position:
               chr29:22720894-22721021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               147-365
               

               Cow position:
               chr29:3395877-3396091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               147-366
               

               Cow position:
               chr29:21236883-21237097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 56
               

               Conread position:
               147-369
               

               Cow position:
               chr29:3502824-3503043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               147-390
               

               Cow position:
               chr29:35281267-35281506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               147-408
               

               Cow position:
               chr29:42886147-42886415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               29, 105
               

               Conread position:
               147-412
               

               Cow position:
               chr29:11684779-11685037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               147-441
               

               Cow position:
               chr29:5977354-5977074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               147-473
               

               Cow position:
               chr29:26318958-26319254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               147-473
               

               Cow position:
               chr29:26329981-26330287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 22
               

               Conread position:
               147-483
               

               Cow position:
               chr29:2984651-2984990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 73
               

               Conread position:
               147-494
               

               Cow position:
               chr29:12309761-12310119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               147-504
               

               Cow position:
               chr29:87253-86891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               147-504
               

               Cow position:
               chr29:11915583-11915941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               147-509
               

               Cow position:
               chr29:1325204-1325566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               147-510
               

               Cow position:
               chr29:750133-749780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               91, 28
               

               Conread position:
               147-510
               

               Cow position:
               chr29:19338746-19339128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               27, 109
               

               Conread position:
               147-510
               

               Cow position:
               chr29:23844598-23844965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 119
               

               Conread position:
               147-510
               

               Cow position:
               chr29:26673139-26672790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               147-510
               

               Cow position:
               chr29:40852699-40853055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               147-539
               

               Cow position:
               chr29:44236233-44236610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               273
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               29, 11
               

               Conread position:
               147-561
               

               Cow position:
               chr29:40117335-40117758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 102
               

               Conread position:
               147-562
               

               Cow position:
               chr29:5892613-5893040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               147-562
               

               Cow position:
               chr29:22613198-22613615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               147-562
               

               Cow position:
               chr29:24604384-24603959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 166
               

               Conread position:
               147-563
               

               Cow position:
               chr29:2644541-2644126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               148-391
               

               Cow position:
               chr29:4327258-4327501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 53
               

               Conread position:
               148-460
               

               Cow position:
               chr29:14501358-14501669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               148-460
               

               Cow position:
               chr29:14615492-14615187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               148-504
               

               Cow position:
               chr29:22175458-22175802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               149-478
               

               Cow position:
               chr29:35376456-35376776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               149-499
               

               Cow position:
               chr29:22936048-22936387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               149-562
               

               Cow position:
               chr29:3584355-3583922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               150-334
               

               Cow position:
               chr29:2415047-2414862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               150-510
               

               Cow position:
               chr29:8669125-8669482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               151-503
               

               Cow position:
               chr29:26334619-26334271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               151-510
               

               Cow position:
               chr29:40299243-40298893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               152-510
               

               Cow position:
               chr29:40096728-40097089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               153-473
               

               Cow position:
               chr29:868546-868864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 5
               

               Conread position:
               153-510
               

               Cow position:
               chr29:2744498-2744144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               154-397
               

               Cow position:
               chr29:16756828-16757070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               154-402
               

               Cow position:
               chr29:35636198-35636453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               154-422
               

               Cow position:
               chr29:12004991-12004724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               22, 66
               

               Conread position:
               154-442
               

               Cow position:
               chr29:3704430-3704140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               154-458
               

               Cow position:
               chr29:29974815-29975112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               154-491
               

               Cow position:
               chr29:1229382-1229715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               154-497
               

               Cow position:
               chr29:25474681-25475037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 249
               

               Conread position:
               154-503
               

               Cow position:
               chr29:4625219-4624879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               154-503
               

               Cow position:
               chr29:39567461-39567802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               154-509
               

               Cow position:
               chr29:42771435-42771761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               157-434
               

               Cow position:
               chr29:41747217-41747498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               157-503
               

               Cow position:
               chr29:3711163-3711494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               157-510
               

               Cow position:
               chr29:2263249-2262868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 258
               

               Conread position:
               157-539
               

               Cow position:
               chr29:356103-356470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               157-557
               

               Cow position:
               chr29:26985005-26985397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               157-562
               

               Cow position:
               chr29:9709475-9709887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               158-379
               

               Cow position:
               chr29:8125817-8125591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 111
               

               Conread position:
               158-409
               

               Cow position:
               chr29:2532839-2533084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               160-503
               

               Cow position:
               chr29:5109431-5109064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               16, 111
               

               Conread position:
               160-562
               

               Cow position:
               chr29:28775675-28775282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               161-563
               

               Cow position:
               chr29:40583578-40583980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               163-496
               

               Cow position:
               chr29:26129281-26129607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               164-556
               

               Cow position:
               chr29:16657469-16657879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               165-352
               

               Cow position:
               chr29:45650559-45650373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               8, 45
               

               Conread position:
               167-402
               

               Cow position:
               chr29:28273599-28273366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 20
               

               Conread position:
               170-442
               

               Cow position:
               chr29:9718981-9718714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 97
               

               Conread position:
               172-449
               

               Cow position:
               chr29:8935279-8935555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               65, 96
               

               Conread position:
               173-510
               

               Cow position:
               chr29:1022084-1022422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 104
               

               Conread position:
               174-478
               

               Cow position:
               chr29:4201915-4202215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               174-478
               

               Cow position:
               chr29:24650569-24650276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 97
               

               Conread position:
               174-478
               

               Cow position:
               chr29:26501301-26501600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               175-476
               

               Cow position:
               chr29:12451168-12451465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               175-504
               

               Cow position:
               chr29:26654244-26653922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               175-558
               

               Cow position:
               chr29:732414-732800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               175-561
               

               Cow position:
               chr29:30440722-30441132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 35
               

               Conread position:
               175-561
               

               Cow position:
               chr29:31489116-31489517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               175-562
               

               Cow position:
               chr29:6337459-6337844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               175-562
               

               Cow position:
               chr29:22690016-22690421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               175-562
               

               Cow position:
               chr29:22778385-22777987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               176-561
               

               Cow position:
               chr29:26259273-26259669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               177-443
               

               Cow position:
               chr29:14034528-14034266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               177-510
               

               Cow position:
               chr29:38580774-38581107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               177-524
               

               Cow position:
               chr29:39329798-39329465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               178-562
               

               Cow position:
               chr29:11433922-11434306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               179-473
               

               Cow position:
               chr29:3100461-3100178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 82
               

               Conread position:
               184-562
               

               Cow position:
               chr29:28979674-28979322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 34
               

               Conread position:
               186-501
               

               Cow position:
               chr29:32211252-32210953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               188-500
               

               Cow position:
               chr29:5186689-5186376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               51, 83
               

               Conread position:
               190-404
               

               Cow position:
               chr29:10659532-10659329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 87
               

               Conread position:
               191-562
               

               Cow position:
               chr29:35442653-35442287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               44, 93
               

               Conread position:
               192-496
               

               Cow position:
               chr29:10235316-10235025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               192-562
               

               Cow position:
               chr29:22068936-22068547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 15
               

               Conread position:
               192-563
               

               Cow position:
               chr29:23241948-23242321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               193-376
               

               Cow position:
               chr29:31899166-31898976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               197-396
               

               Cow position:
               chr29:24345635-24345433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 73
               

               Conread position:
               197-413
               

               Cow position:
               chr29:3539102-3538877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               197-417
               

               Cow position:
               chr29:3368650-3368423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 74
               

               Conread position:
               197-441
               

               Cow position:
               chr29:17301343-17301591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               197-495
               

               Cow position:
               chr29:33548399-33548112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               197-510
               

               Cow position:
               chr29:20910882-20910563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               40, 72
               

               Conread position:
               197-516
               

               Cow position:
               chr29:29475437-29475116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               197-562
               

               Cow position:
               chr29:42364200-42363825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               197-563
               

               Cow position:
               chr29:30188522-30188136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               198-463
               

               Cow position:
               chr29:17668315-17668566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               198-502
               

               Cow position:
               chr29:28166398-28166103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               198-549
               

               Cow position:
               chr29:44988962-44988623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 76
               

               Conread position:
               199-503
               

               Cow position:
               chr29:29512319-29512021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               199-527
               

               Cow position:
               chr29:12900731-12900407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               173, 24
               

               Conread position:
               199-561
               

               Cow position:
               chr29:37618126-37618501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               199-561
               

               Cow position:
               chr29:43099925-43099556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               199-562
               

               Cow position:
               chr29:25091929-25092298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 71
               

               Conread position:
               200-562
               

               Cow position:
               chr29:35291907-35292280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               202-495
               

               Cow position:
               chr29:856594-856291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               204-483
               

               Cow position:
               chr29:28194768-28194488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               205-563
               

               Cow position:
               chr29:4085142-4085491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               207-398
               

               Cow position:
               chr29:456969-456772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               208-562
               

               Cow position:
               chr29:5409321-5408948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 139
               

               Conread position:
               209-472
               

               Cow position:
               chr29:353964-353710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               209-496
               

               Cow position:
               chr29:9911999-9912288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               209-541
               

               Cow position:
               chr29:28587284-28587614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               209-562
               

               Cow position:
               chr29:19428485-19428844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 70
               

               Conread position:
               209-564
               

               Cow position:
               chr29:16309572-16309917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               210-419
               

               Cow position:
               chr29:26042456-26042663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               210-425
               

               Cow position:
               chr29:14484718-14484496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               210-459
               

               Cow position:
               chr29:29942905-29942652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               210-472
               

               Cow position:
               chr29:25815004-25814749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               151, 16
               

               Conread position:
               210-494
               

               Cow position:
               chr29:18413310-18413608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 155
               

               Conread position:
               210-497
               

               Cow position:
               chr29:4334555-4334832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               218
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               29, 66
               

               Conread position:
               210-501
               

               Cow position:
               chr29:11054027-11053742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 29
               

               Conread position:
               210-504
               

               Cow position:
               chr29:6293648-6293360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               210-510
               

               Cow position:
               chr29:24252066-24252358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               29, 61
               

               Conread position:
               210-530
               

               Cow position:
               chr29:36209992-36210286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               210-557
               

               Cow position:
               chr29:1395427-1395761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               210-560
               

               Cow position:
               chr29:29769523-29769162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 59
               

               Conread position:
               210-561
               

               Cow position:
               chr29:11366073-11366407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               210-562
               

               Cow position:
               chr29:44682269-44681938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               211-460
               

               Cow position:
               chr29:23951740-23951505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               211-493
               

               Cow position:
               chr29:19549397-19549118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               211-504
               

               Cow position:
               chr29:23244051-23243757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               214-389
               

               Cow position:
               chr29:25432235-25432405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               215-539
               

               Cow position:
               chr29:17154604-17154930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               110, 17
               

               Conread position:
               215-553
               

               Cow position:
               chr29:45589761-45589417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 57
               

               Conread position:
               216-485
               

               Cow position:
               chr29:19821121-19821385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               217-558
               

               Cow position:
               chr29:10058701-10058353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               218-392
               

               Cow position:
               chr29:29940335-29940505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               218-562
               

               Cow position:
               chr29:17296967-17297332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               219-562
               

               Cow position:
               chr29:31674467-31674825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               221-494
               

               Cow position:
               chr29:3726873-3727140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               223-493
               

               Cow position:
               chr29:26416201-26416460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               223-504
               

               Cow position:
               chr29:34302293-34302009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               223-561
               

               Cow position:
               chr29:29559879-29559548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               224-560
               

               Cow position:
               chr29:7663423-7663100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               224-562
               

               Cow position:
               chr29:2055902-2056254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               224-564
               

               Cow position:
               chr29:12025629-12025283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 52
               

               Conread position:
               225-504
               

               Cow position:
               chr29:11646940-11647215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               125, 36
               

               Conread position:
               225-555
               

               Cow position:
               chr29:23389717-23389379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               225-562
               

               Cow position:
               chr29:27816202-27816530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 14
               

               Conread position:
               226-460
               

               Cow position:
               chr29:28396532-28396771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               227-504
               

               Cow position:
               chr29:29314810-29314539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 43
               

               Conread position:
               230-460
               

               Cow position:
               chr29:8816285-8816065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               233-460
               

               Cow position:
               chr29:5275402-5275176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               236-472
               

               Cow position:
               chr29:9455198-9454970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               236-506
               

               Cow position:
               chr29:21706534-21706277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               236-510
               

               Cow position:
               chr29:40959992-40959721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               88, 22
               

               Conread position:
               236-516
               

               Cow position:
               chr29:11398067-11397791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               92, 31
               

               Conread position:
               236-556
               

               Cow position:
               chr29:35084367-35084035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 33
               

               Conread position:
               236-562
               

               Cow position:
               chr29:44008926-44008613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               238-498
               

               Cow position:
               chr29:36220385-36220649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               238-564
               

               Cow position:
               chr29:34359122-34358783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               240-562
               

               Cow position:
               chr29:11005588-11005905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               88, 47
               

               Conread position:
               241-482
               

               Cow position:
               chr29:27329753-27329990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               241-503
               

               Cow position:
               chr29:21941453-21941721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               36, 155
               

               Conread position:
               241-549
               

               Cow position:
               chr29:18203510-18203225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               244-497
               

               Cow position:
               chr29:7621706-7621451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               245-459
               

               Cow position:
               chr29:25284597-25284387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 22
               

               Conread position:
               245-460
               

               Cow position:
               chr29:29795523-29795306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               247-485
               

               Cow position:
               chr29:28735178-28734947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 23
               

               Conread position:
               247-560
               

               Cow position:
               chr29:11666828-11667140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               249-489
               

               Cow position:
               chr29:8176517-8176761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               250-457
               

               Cow position:
               chr29:17168269-17168481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               250-562
               

               Cow position:
               chr29:3825835-3826160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 102
               

               Conread position:
               252-442
               

               Cow position:
               chr29:630272-630455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 18
               

               Conread position:
               256-497
               

               Cow position:
               chr29:20243939-20243691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 206
               

               Conread position:
               259-564
               

               Cow position:
               chr29:12626104-12625802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               261-504
               

               Cow position:
               chr29:13028313-13028561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               263-485
               

               Cow position:
               chr29:11611716-11611946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               263-485
               

               Cow position:
               chr29:24429967-24429737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 102
               

               Conread position:
               263-562
               

               Cow position:
               chr29:3685634-3685327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 21
               

               Conread position:
               265-562
               

               Cow position:
               chr29:7624055-7624359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 41
               

               Conread position:
               266-460
               

               Cow position:
               chr29:11719844-11720043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               267-406
               

               Cow position:
               chr29:11489841-11489697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               267-501
               

               Cow position:
               chr29:29176734-29176499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               57, 100
               

               Conread position:
               267-504
               

               Cow position:
               chr29:847761-847521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               12, 135
               

               Conread position:
               267-557
               

               Cow position:
               chr29:30227392-30227091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               61, 93
               

               Conread position:
               278-504
               

               Cow position:
               chr29:18404221-18403996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 78
               

               Conread position:
               278-504
               

               Cow position:
               chr29:40994998-40994770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               278-562
               

               Cow position:
               chr29:5046544-5046847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               50, 116
               

               Conread position:
               278-564
               

               Cow position:
               chr29:7310580-7310859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 52
               

               Conread position:
               279-562
               

               Cow position:
               chr29:8862585-8862305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               282-488
               

               Cow position:
               chr29:24578754-24578968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               285-491
               

               Cow position:
               chr29:27873503-27873709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               286-504
               

               Cow position:
               chr29:21508450-21508228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 52
               

               Conread position:
               295-520
               

               Cow position:
               chr29:4418734-4418962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 52
               

               Conread position:
               295-537
               

               Cow position:
               chr29:30713800-30713551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               295-560
               

               Cow position:
               chr29:15947080-15947361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               182, 95
               

               Conread position:
               295-560
               

               Cow position:
               chr29:18450224-18449946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               295-562
               

               Cow position:
               chr29:19250256-19250537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               296-500
               

               Cow position:
               chr29:43251258-43251048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               296-510
               

               Cow position:
               chr29:26559331-26559119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               296-564
               

               Cow position:
               chr29:22721283-22721549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               297-508
               

               Cow position:
               chr29:13373210-13373426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               298-494
               

               Cow position:
               chr29:694089-693898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               298-556
               

               Cow position:
               chr29:31813860-31814105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               298-562
               

               Cow position:
               chr29:28993772-28994050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               298-564
               

               Cow position:
               chr29:13486861-13487118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 97
               

               Conread position:
               299-562
               

               Cow position:
               chr29:23813123-23812854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               301-562
               

               Cow position:
               chr29:16290645-16290917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               302-504
               

               Cow position:
               chr29:13867295-13867088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               302-509
               

               Cow position:
               chr29:42886466-42886670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               175, 30
               

               Conread position:
               304-502
               

               Cow position:
               chr29:22519212-22519008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               305-501
               

               Cow position:
               chr29:8005004-8004809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               306-485
               

               Cow position:
               chr29:18012474-18012660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               308-561
               

               Cow position:
               chr29:43183386-43183125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               308-563
               

               Cow position:
               chr29:38348105-38347839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 159
               

               Conread position:
               311-504
               

               Cow position:
               chr29:7103480-7103679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               311-504
               

               Cow position:
               chr29:40633575-40633772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               153, 42
               

               Conread position:
               311-562
               

               Cow position:
               chr29:5616941-5616693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               312-504
               

               Cow position:
               chr29:5210416-5210612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 88
               

               Conread position:
               312-504
               

               Cow position:
               chr29:32926026-32926225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               316-562
               

               Cow position:
               chr29:31651347-31651596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 5
               

               Conread position:
               322-503
               

               Cow position:
               chr29:27911532-27911710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               322-552
               

               Cow position:
               chr29:43544662-43544421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               155, 69
               

               Conread position:
               322-564
               

               Cow position:
               chr29:17236375-17236618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               323-472
               

               Cow position:
               chr29:36830300-36830446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               323-509
               

               Cow position:
               chr29:5995160-5994970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 76
               

               Conread position:
               323-560
               

               Cow position:
               chr29:501140-501393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               155, 64
               

               Conread position:
               323-560
               

               Cow position:
               chr29:1011633-1011401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               323-561
               

               Cow position:
               chr29:4691452-4691215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 91
               

               Conread position:
               323-562
               

               Cow position:
               chr29:20167363-20167617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               323-562
               

               Cow position:
               chr29:30350994-30350756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               324-460
               

               Cow position:
               chr29:28206876-28207012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               324-488
               

               Cow position:
               chr29:36632920-36632755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               324-560
               

               Cow position:
               chr29:32656373-32656628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               324-562
               

               Cow position:
               chr29:42630063-42630311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               176, 60
               

               Conread position:
               325-561
               

               Cow position:
               chr29:23825611-23825855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               326-556
               

               Cow position:
               chr29:4423496-4423262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               326-562
               

               Cow position:
               chr29:22167138-22166893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               329-561
               

               Cow position:
               chr29:11696660-11696885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               149, 55
               

               Conread position:
               333-562
               

               Cow position:
               chr29:35258933-35259175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               335-497
               

               Cow position:
               chr29:19909909-19910069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               338-483
               

               Cow position:
               chr29:19559065-19558920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               338-493
               

               Cow position:
               chr29:37046744-37046591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               140, 17
               

               Conread position:
               338-551
               

               Cow position:
               chr29:18556630-18556850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               139, 18
               

               Conread position:
               338-558
               

               Cow position:
               chr29:31981787-31982012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               140, 56
               

               Conread position:
               338-560
               

               Cow position:
               chr29:22028996-22028769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               341-564
               

               Cow position:
               chr29:5769754-5769990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               344-562
               

               Cow position:
               chr29:8686290-8686504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               347-562
               

               Cow position:
               chr29:24188100-24187869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               130, 42
               

               Conread position:
               348-504
               

               Cow position:
               chr29:11042398-11042549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               130, 46
               

               Conread position:
               348-539
               

               Cow position:
               chr29:44684069-44684265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               348-555
               

               Cow position:
               chr29:40791276-40791484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 43
               

               Conread position:
               348-562
               

               Cow position:
               chr29:396381-396596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               130, 8
               

               Conread position:
               348-562
               

               Cow position:
               chr29:5520518-5520290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               129, 6
               

               Conread position:
               348-563
               

               Cow position:
               chr29:5788996-5789210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               348-563
               

               Cow position:
               chr29:27819185-27819400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               148, 41
               

               Conread position:
               348-564
               

               Cow position:
               chr29:26602159-26602396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               350-563
               

               Cow position:
               chr29:16278956-16279172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               146, 34
               

               Conread position:
               351-494
               

               Cow position:
               chr29:38858243-38858104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               351-510
               

               Cow position:
               chr29:42883989-42883830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               351-535
               

               Cow position:
               chr29:21509821-21509995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               351-562
               

               Cow position:
               chr29:22720683-22720453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               352-503
               

               Cow position:
               chr29:16200508-16200358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               354-563
               

               Cow position:
               chr29:31934351-31934571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               355-549
               

               Cow position:
               chr29:22723574-22723777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               359-562
               

               Cow position:
               chr29:8163850-8163633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               359-562
               

               Cow position:
               chr29:32656115-32655900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 30
               

               Conread position:
               361-510
               

               Cow position:
               chr29:16365910-16365758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               362-562
               

               Cow position:
               chr29:3292928-3293137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               138, 25
               

               Conread position:
               362-562
               

               Cow position:
               chr29:28066471-28066674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 23
               

               Conread position:
               363-509
               

               Cow position:
               chr29:34760432-34760291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               115, 20
               

               Conread position:
               363-562
               

               Cow position:
               chr29:38754958-38754744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               364-562
               

               Cow position:
               chr29:9378619-9378829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               365-504
               

               Cow position:
               chr29:24051398-24051261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               365-564
               

               Cow position:
               chr29:19176930-19176719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               371-562
               

               Cow position:
               chr29:29308582-29308388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               374-543
               

               Cow position:
               chr29:4053348-4053172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               374-544
               

               Cow position:
               chr29:16672483-16672650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               375-555
               

               Cow position:
               chr29:23913400-23913210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               376-500
               

               Cow position:
               chr29:19244465-19244341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               376-502
               

               Cow position:
               chr29:1220137-1220012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               102, 13
               

               Conread position:
               377-510
               

               Cow position:
               chr29:17436744-17436873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               377-543
               

               Cow position:
               chr29:2135522-2135356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               378-562
               

               Cow position:
               chr29:4441210-4441011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               381-563
               

               Cow position:
               chr29:8634651-8634847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               382-562
               

               Cow position:
               chr29:14576857-14577051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               384-562
               

               Cow position:
               chr29:25793146-25793335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               95, 61
               

               Conread position:
               384-563
               

               Cow position:
               chr29:43088311-43088501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               385-484
               

               Cow position:
               chr29:39285496-39285596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               385-493
               

               Cow position:
               chr29:26411468-26411359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               385-498
               

               Cow position:
               chr29:629539-629653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               385-499
               

               Cow position:
               chr29:19060081-19059967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               95, 80
               

               Conread position:
               385-502
               

               Cow position:
               chr29:19187027-19187145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               385-561
               

               Cow position:
               chr29:19420612-19420427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               387-563
               

               Cow position:
               chr29:21012339-21012170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               387-564
               

               Cow position:
               chr29:5064785-5064960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               395-510
               

               Cow position:
               chr29:8799004-8798888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               396-504
               

               Cow position:
               chr29:26764378-26764483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               396-529
               

               Cow position:
               chr29:33393690-33393825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 119
               

               Conread position:
               396-564
               

               Cow position:
               chr29:26207987-26208155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 113
               

               Conread position:
               397-562
               

               Cow position:
               chr29:14746793-14746972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               399-510
               

               Cow position:
               chr29:1402781-1402896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               399-562
               

               Cow position:
               chr29:415034-415195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               399-563
               

               Cow position:
               chr29:37293054-37293222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               399-564
               

               Cow position:
               chr29:3538661-3538489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               400-561
               

               Cow position:
               chr29:1959930-1959762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 122
               

               Conread position:
               405-562
               

               Cow position:
               chr29:11489559-11489401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               106, 12
               

               Conread position:
               409-563
               

               Cow position:
               chr29:22652348-22652514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               410-562
               

               Cow position:
               chr29:10203798-10203963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               410-563
               

               Cow position:
               chr29:10192013-10191850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               418-563
               

               Cow position:
               chr29:13063893-13064045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               419-562
               

               Cow position:
               chr29:7381495-7381352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               119, 59
               

               Conread position:
               420-562
               

               Cow position:
               chr29:23678745-23678895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.
Conread position:	125-553
Cow position:	chr29:4520080-4520517 (view UCSC Genome Browser custom track)
Alignm length:	454
Alignm identity:	333
Alignm E-value:	0
Alignm gaps (pig, cow):	51, 95
Conread position:	130-561
Cow position:	chr29:34773978-34773556 (view UCSC Genome Browser custom track)
Alignm length:	447
Alignm identity:	302
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	46, 68
Conread position:	131-474
Cow position:	chr29:41364863-41365199 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 44
Conread position:	131-510
Cow position:	chr29:24623998-24624374 (view UCSC Genome Browser custom track)
Alignm length:	388
Alignm identity:	272
Alignm E-value:	0
Alignm gaps (pig, cow):	46, 129
Conread position:	131-562
Cow position:	chr29:19949060-19949499 (view UCSC Genome Browser custom track)
Alignm length:	452
Alignm identity:	304
Alignm E-value:	6.99949e-42
Alignm gaps (pig, cow):	45, 162
Conread position:	135-562
Cow position:	chr29:23697733-23698164 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	325
Alignm E-value:	0
Alignm gaps (pig, cow):	10, 23
Conread position:	136-445
Cow position:	chr29:24119981-24119681 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	229
Alignm E-value:	0
Alignm gaps (pig, cow):	40, 126
Conread position:	136-510
Cow position:	chr29:22714972-22714597 (view UCSC Genome Browser custom track)
Alignm length:	386
Alignm identity:	259
Alignm E-value:	5e-39
Alignm gaps (pig, cow):	40, 136
Conread position:	136-564
Cow position:	chr29:19762029-19762459 (view UCSC Genome Browser custom track)
Alignm length:	446
Alignm identity:	308
Alignm E-value:	0
Alignm gaps (pig, cow):	41, 22
Conread position:	137-437
Cow position:	chr29:477860-478161 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	206
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	39, 20
Conread position:	137-476
Cow position:	chr29:13553889-13554228 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	238
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	39, 135
Conread position:	137-502
Cow position:	chr29:24292633-24292988 (view UCSC Genome Browser custom track)
Alignm length:	373
Alignm identity:	270
Alignm E-value:	0
Alignm gaps (pig, cow):	191, 40
Conread position:	137-504
Cow position:	chr29:36216875-36217233 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	264
Alignm E-value:	0
Alignm gaps (pig, cow):	39, 20
Conread position:	137-509
Cow position:	chr29:20626334-20626695 (view UCSC Genome Browser custom track)
Alignm length:	380
Alignm identity:	254
Alignm E-value:	8e-33
Alignm gaps (pig, cow):	36, 20
Conread position:	137-556
Cow position:	chr29:18878744-18878294 (view UCSC Genome Browser custom track)
Alignm length:	456
Alignm identity:	324
Alignm E-value:	0
Alignm gaps (pig, cow):	39, 84
Conread position:	137-562
Cow position:	chr29:34745897-34745467 (view UCSC Genome Browser custom track)
Alignm length:	452
Alignm identity:	320
Alignm E-value:	0
Alignm gaps (pig, cow):	38, 20
Conread position:	138-457
Cow position:	chr29:24103791-24103468 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	221
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	38, 135
Conread position:	138-562
Cow position:	chr29:699856-699434 (view UCSC Genome Browser custom track)
Alignm length:	439
Alignm identity:	291
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	38, 20
Conread position:	139-350
Cow position:	chr29:21000400-21000614 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	164
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	36, 46
Conread position:	139-391
Cow position:	chr29:11696293-11696539 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	181
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	37, 26