Cow genome map

Conread name: Ss1.1-Pig4-TMW8055B16.3

Conread position: 78-562
Cow position: chr3:75158042-75158526 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 39

Conread position: 122-331
Cow position: chr3:23269819-23270021 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 76

Conread position: 123-427
Cow position: chr3:74621277-74620968 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 136

Conread position: 123-448
Cow position: chr3:22820293-22820613 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 52, 32

Conread position: 123-561
Cow position: chr3:54903287-54903737 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 79

Conread position: 123-562
Cow position: chr3:15229098-15228670 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 25

Conread position: 124-470
Cow position: chr3:15685195-15684858 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 34

Conread position: 124-562
Cow position: chr3:42480339-42480766 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 297
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 90

Conread position: 124-562
Cow position: chr3:75050896-75050452 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 65

Conread position: 126-475
Cow position: chr3:52147956-52147582 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 167

Conread position: 127-379
Cow position: chr3:49454960-49455213 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 47, 73

Conread position: 128-402
Cow position: chr3:28692705-28692431 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 83

Conread position: 129-381
Cow position: chr3:8604285-8604041 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 18

Conread position: 130-424
Cow position: chr3:41328183-41328459 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 76

Conread position: 130-478
Cow position: chr3:35915431-35915778 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 32

Conread position: 131-561
Cow position: chr3:82020114-82019672 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 295
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 26

Conread position: 133-564
Cow position: chr3:7338043-7337614 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 307
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 43, 144

Conread position: 134-380
Cow position: chr3:45307667-45307912 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 23

Conread position: 134-422
Cow position: chr3:14625656-14625374 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 82

Conread position: 134-560
Cow position: chr3:56476414-56476843 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 86

Conread position: 134-563
Cow position: chr3:71161526-71161960 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 105

Conread position: 135-502
Cow position: chr3:52607916-52608279 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 131

Conread position: 136-357
Cow position: chr3:55970959-55971181 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 102

Conread position: 136-476
Cow position: chr3:44861573-44861243 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 24

Conread position: 136-499
Cow position: chr3:53046923-53046569 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 136-515
Cow position: chr3:67704275-67704656 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 21

Conread position: 136-561
Cow position: chr3:30179817-30180253 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 87

Conread position: 137-346
Cow position: chr3:22872317-22872105 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 73

Conread position: 137-392
Cow position: chr3:41367248-41366992 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 20

Conread position: 137-402
Cow position: chr3:48269598-48269861 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 132

Conread position: 137-412
Cow position: chr3:9843319-9843593 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 23

Conread position: 137-428
Cow position: chr3:5416496-5416198 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 187

Conread position: 137-476
Cow position: chr3:12286970-12287292 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 53

Conread position: 137-495
Cow position: chr3:28898487-28898133 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 137-504
Cow position: chr3:5101025-5100673 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 21

Conread position: 137-560
Cow position: chr3:23111769-23111364 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 287
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 25

Conread position: 137-562
Cow position: chr3:17937104-17936676 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 137

Conread position: 137-562
Cow position: chr3:54770739-54771152 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 59

Conread position: 137-563
Cow position: chr3:2397048-2396623 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 294
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 129

Conread position: 138-510
Cow position: chr3:43571477-43571855 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 36, 20

Conread position: 138-562
Cow position: chr3:18393647-18393229 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 138-562
Cow position: chr3:20256932-20257391 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 313
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 139-369
Cow position: chr3:42588087-42588325 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 18

Conread position: 139-377
Cow position: chr3:15661963-15661728 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 84

Conread position: 139-387
Cow position: chr3:73590261-73590011 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 38

Conread position: 139-392
Cow position: chr3:30358896-30358645 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 22

Conread position: 139-407
Cow position: chr3:77496555-77496832 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 18

Conread position: 139-412
Cow position: chr3:79208265-79207980 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 18

Conread position: 139-416
Cow position: chr3:77227056-77227334 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 18

Conread position: 139-418
Cow position: chr3:27544591-27544319 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 19

Conread position: 139-419
Cow position: chr3:30417867-30418155 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 22

Conread position: 139-457
Cow position: chr3:66610100-66609793 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 18

Conread position: 139-459
Cow position: chr3:2036036-2036358 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 22

Conread position: 139-475
Cow position: chr3:72131560-72131229 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 71

Conread position: 139-486
Cow position: chr3:5096941-5097288 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 139-495
Cow position: chr3:55085446-55085080 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 139-499
Cow position: chr3:52017494-52017865 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 99

Conread position: 139-509
Cow position: chr3:54782274-54781900 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 31

Conread position: 139-514
Cow position: chr3:82460921-82461288 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 58

Conread position: 139-522
Cow position: chr3:59101573-59101944 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 54, 19

Conread position: 139-546
Cow position: chr3:53739453-53739045 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 139-555
Cow position: chr3:2674767-2675196 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 139-555
Cow position: chr3:48629848-48629448 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 98

Conread position: 139-556
Cow position: chr3:77271530-77271122 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 101

Conread position: 139-560
Cow position: chr3:49119294-49118861 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 305
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 61

Conread position: 139-561
Cow position: chr3:210060-210492 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 139-561
Cow position: chr3:33253144-33252722 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 81

Conread position: 139-562
Cow position: chr3:50768417-50768850 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 304
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 17

Conread position: 139-562
Cow position: chr3:59333513-59333930 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 304
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 28

Conread position: 139-562
Cow position: chr3:65236763-65237194 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 139-563
Cow position: chr3:53150065-53150505 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 139-563
Cow position: chr3:80053796-80053386 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 139-564
Cow position: chr3:2518799-2518368 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 139-564
Cow position: chr3:75479750-75480171 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 300
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 19

Conread position: 139-564
Cow position: chr3:77365556-77365119 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 140-383
Cow position: chr3:25691487-25691730 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 137

Conread position: 140-448
Cow position: chr3:46350398-46350713 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 36, 17

Conread position: 140-510
Cow position: chr3:78946098-78945734 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 125

Conread position: 140-547
Cow position: chr3:57624204-57624605 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 140-561
Cow position: chr3:8393677-8394082 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 81

Conread position: 140-562
Cow position: chr3:54340675-54340270 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 283
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 36, 20

Conread position: 141-315
Cow position: chr3:18607109-18607279 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 17

Conread position: 141-324
Cow position: chr3:51609555-51609737 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 59

Conread position: 141-326
Cow position: chr3:82473794-82473976 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 134

Conread position: 141-503
Cow position: chr3:6689733-6690098 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 133

Conread position: 141-562
Cow position: chr3:14601975-14601541 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 56

Conread position: 141-562
Cow position: chr3:56582584-56583019 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 300
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 16

Conread position: 142-392
Cow position: chr3:83934256-83934496 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 16

Conread position: 142-437
Cow position: chr3:29807203-29807494 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 15

Conread position: 142-469
Cow position: chr3:73759777-73759454 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 33

Conread position: 142-473
Cow position: chr3:12675296-12674976 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 78

Conread position: 142-491
Cow position: chr3:53112910-53113261 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 16

Conread position: 142-497
Cow position: chr3:36672263-36671903 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 208

Conread position: 142-529
Cow position: chr3:45184106-45183707 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 68

Conread position: 142-556
Cow position: chr3:174670-175108 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 296
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 15

Conread position: 142-562
Cow position: chr3:36100567-36100982 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 124

Conread position: 142-562
Cow position: chr3:69750960-69750564 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 68

Conread position: 142-562
Cow position: chr3:76172921-76172511 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 16

Conread position: 143-320
Cow position: chr3:65020075-65020248 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 94

Conread position: 143-323
Cow position: chr3:48530378-48530562 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 77

Conread position: 143-334
Cow position: chr3:58383709-58383896 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 67

Conread position: 143-337
Cow position: chr3:61678432-61678627 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 83

Conread position: 143-349
Cow position: chr3:74699654-74699451 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 130

Conread position: 143-380
Cow position: chr3:19789378-19789138 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 104

Conread position: 143-385
Cow position: chr3:17952397-17952639 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 95

Conread position: 143-385
Cow position: chr3:23944838-23945083 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 55

Conread position: 143-391
Cow position: chr3:58158725-58158486 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 17

Conread position: 143-392
Cow position: chr3:4332104-4332353 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 130

Conread position: 143-392
Cow position: chr3:35975364-35975120 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 88

Conread position: 143-392
Cow position: chr3:63861160-63860901 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 143-392
Cow position: chr3:78201008-78201256 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 33, 123

Conread position: 143-392
Cow position: chr3:81939992-81940246 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 127

Conread position: 143-403
Cow position: chr3:11019859-11020115 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 53

Conread position: 143-409
Cow position: chr3:18763635-18763893 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 69

Conread position: 143-410
Cow position: chr3:17451193-17450935 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 123

Conread position: 143-410
Cow position: chr3:84000353-84000617 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 81

Conread position: 143-411
Cow position: chr3:80082075-80081808 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 16

Conread position: 143-416
Cow position: chr3:59514852-59515114 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 80

Conread position: 143-439
Cow position: chr3:43528496-43528199 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 67

Conread position: 143-443
Cow position: chr3:80818470-80818754 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 84

Conread position: 143-453
Cow position: chr3:83920939-83921231 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 33, 127

Conread position: 143-457
Cow position: chr3:81277962-81277641 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 31, 123

Conread position: 143-458
Cow position: chr3:22089541-22089225 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 56

Conread position: 143-460
Cow position: chr3:20129683-20129989 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 57

Conread position: 143-460
Cow position: chr3:54050277-54049977 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 15

Conread position: 143-460
Cow position: chr3:79220591-79220912 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 84

Conread position: 143-465
Cow position: chr3:72018860-72019175 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 81

Conread position: 143-478
Cow position: chr3:15954335-15954013 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 14

Conread position: 143-482
Cow position: chr3:19006408-19006733 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 57

Conread position: 143-485
Cow position: chr3:4031709-4032043 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 81

Conread position: 143-485
Cow position: chr3:71430471-71430125 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 143-485
Cow position: chr3:72675828-72676171 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 143-494
Cow position: chr3:80581412-80581744 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 143-495
Cow position: chr3:29507337-29507671 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 91

Conread position: 143-495
Cow position: chr3:51255525-51255869 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 133

Conread position: 143-495
Cow position: chr3:69417047-69416692 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 57

Conread position: 143-495
Cow position: chr3:70565997-70565648 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 35, 67

Conread position: 143-497
Cow position: chr3:37599675-37599336 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 44

Conread position: 143-500
Cow position: chr3:62826882-62826524 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 122

Conread position: 143-501
Cow position: chr3:17895595-17895945 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 143-502
Cow position: chr3:73443346-73442999 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 33, 77

Conread position: 143-503
Cow position: chr3:31771439-31771780 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 33, 67

Conread position: 143-503
Cow position: chr3:39171743-39171390 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 33, 95

Conread position: 143-503
Cow position: chr3:73777019-73777369 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 138

Conread position: 143-504
Cow position: chr3:12712182-12711816 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 135

Conread position: 143-504
Cow position: chr3:61278647-61279007 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 207

Conread position: 143-510
Cow position: chr3:17222403-17222034 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 143-510
Cow position: chr3:39066074-39066437 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 86

Conread position: 143-510
Cow position: chr3:59630758-59630408 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 143-510
Cow position: chr3:63179609-63179959 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 143-510
Cow position: chr3:70899641-70899995 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 78

Conread position: 143-515
Cow position: chr3:27532923-27532547 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 133

Conread position: 143-521
Cow position: chr3:71497404-71497021 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 98

Conread position: 143-532
Cow position: chr3:53588649-53588265 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 272
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 62

Conread position: 143-546
Cow position: chr3:15387952-15388374 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 127

Conread position: 143-554
Cow position: chr3:23876739-23877150 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 77

Conread position: 143-554
Cow position: chr3:62999263-62998832 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 143-555
Cow position: chr3:59001004-59000599 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 143-558
Cow position: chr3:65968896-65969341 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 15

Conread position: 143-559
Cow position: chr3:51234355-51233936 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 143-561
Cow position: chr3:45647417-45647836 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 131

Conread position: 143-561
Cow position: chr3:55124537-55124115 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 63

Conread position: 143-561
Cow position: chr3:64281195-64280768 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 121

Conread position: 143-561
Cow position: chr3:74499965-74500427 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 258

Conread position: 143-562
Cow position: chr3:4457335-4456925 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 304
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 57

Conread position: 143-562
Cow position: chr3:8393087-8393510 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 135

Conread position: 143-562
Cow position: chr3:9641305-9641726 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 143-562
Cow position: chr3:14552619-14553043 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 143-562
Cow position: chr3:17695264-17694831 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 121

Conread position: 143-562
Cow position: chr3:17957208-17957632 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 25

Conread position: 143-562
Cow position: chr3:18066876-18067301 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 143-562
Cow position: chr3:18459779-18459366 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 80

Conread position: 143-562
Cow position: chr3:21081644-21081209 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 293
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 22

Conread position: 143-562
Cow position: chr3:30463425-30463005 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 92

Conread position: 143-562
Cow position: chr3:31309614-31309183 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 52

Conread position: 143-562
Cow position: chr3:48362824-48363240 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 113

Conread position: 143-562
Cow position: chr3:51578580-51578153 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 143-562
Cow position: chr3:55190011-55189579 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 307
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 54

Conread position: 143-562
Cow position: chr3:68303069-68303489 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 57

Conread position: 143-562
Cow position: chr3:68647902-68648348 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 143-562
Cow position: chr3:75080507-75080923 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 130

Conread position: 143-563
Cow position: chr3:23471727-23471291 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 136

Conread position: 143-563
Cow position: chr3:60597289-60597709 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 54

Conread position: 143-563
Cow position: chr3:64172186-64172594 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 143-563
Cow position: chr3:70895787-70896211 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 134

Conread position: 143-564
Cow position: chr3:2506740-2506303 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 131

Conread position: 143-564
Cow position: chr3:45881650-45882072 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 33, 76

Conread position: 143-564
Cow position: chr3:57763964-57764386 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 129

Conread position: 143-564
Cow position: chr3:59366288-59366707 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 132

Conread position: 143-564
Cow position: chr3:73394857-73395288 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 135

Conread position: 143-564
Cow position: chr3:73467360-73467799 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 47

Conread position: 144-324
Cow position: chr3:34392355-34392181 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 95

Conread position: 144-331
Cow position: chr3:61467347-61467530 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 125

Conread position: 144-388
Cow position: chr3:67161673-67161928 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 132

Conread position: 144-389
Cow position: chr3:35283356-35283104 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 122

Conread position: 144-390
Cow position: chr3:27285967-27286217 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 121

Conread position: 144-391
Cow position: chr3:12323807-12324057 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 44

Conread position: 144-392
Cow position: chr3:49731896-49731651 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 80

Conread position: 144-392
Cow position: chr3:82657343-82657099 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 64

Conread position: 144-398
Cow position: chr3:81401563-81401320 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 33, 14

Conread position: 144-403
Cow position: chr3:5899567-5899823 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 65

Conread position: 144-405
Cow position: chr3:49230752-49231019 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 127

Conread position: 144-424
Cow position: chr3:69961969-69961700 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 76

Conread position: 144-429
Cow position: chr3:13899711-13899424 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 127

Conread position: 144-437
Cow position: chr3:33698463-33698762 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 122

Conread position: 144-448
Cow position: chr3:79902245-79902538 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 33, 83

Conread position: 144-457
Cow position: chr3:65800334-65800636 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 77

Conread position: 144-458
Cow position: chr3:61857238-61857558 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 127

Conread position: 144-460
Cow position: chr3:18854835-18855129 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 60

Conread position: 144-460
Cow position: chr3:30009168-30008854 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 91

Conread position: 144-460
Cow position: chr3:31298418-31298109 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 127

Conread position: 144-460
Cow position: chr3:55117230-55116923 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 56

Conread position: 144-473
Cow position: chr3:25690527-25690860 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 144-478
Cow position: chr3:61539538-61539873 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 56

Conread position: 144-485
Cow position: chr3:45279199-45279545 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 59

Conread position: 144-489
Cow position: chr3:51012791-51012469 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 76

Conread position: 144-491
Cow position: chr3:38346943-38347276 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 144-493
Cow position: chr3:66292437-66292088 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 103

Conread position: 144-495
Cow position: chr3:26493483-26493141 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 227
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 16

Conread position: 144-497
Cow position: chr3:83816052-83815696 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 117

Conread position: 144-499
Cow position: chr3:2216101-2216462 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 144-502
Cow position: chr3:14263134-14263489 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 144-502
Cow position: chr3:52863442-52863086 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 144-502
Cow position: chr3:81471359-81470999 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 144-503
Cow position: chr3:38691664-38691308 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 144-503
Cow position: chr3:56059549-56059909 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 64

Conread position: 144-503
Cow position: chr3:66901000-66900635 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 144-504
Cow position: chr3:17935181-17934840 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 144-507
Cow position: chr3:26920638-26921012 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 138

Conread position: 144-510
Cow position: chr3:1830821-1830471 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 52

Conread position: 144-510
Cow position: chr3:2024926-2025307 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 144-510
Cow position: chr3:46900936-46901301 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 144-510
Cow position: chr3:60933157-60933522 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 56

Conread position: 144-511
Cow position: chr3:48296452-48296804 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 144-511
Cow position: chr3:61143835-61144202 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 94

Conread position: 144-515
Cow position: chr3:35852726-35852362 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 32, 114

Conread position: 144-516
Cow position: chr3:64011075-64010705 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 55

Conread position: 144-516
Cow position: chr3:65413534-65413167 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 47

Conread position: 144-527
Cow position: chr3:31206614-31206999 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 144-529
Cow position: chr3:72390822-72391202 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 144-546
Cow position: chr3:68583261-68582860 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 252
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 32, 45

Conread position: 144-552
Cow position: chr3:48241363-48241768 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 67

Conread position: 144-554
Cow position: chr3:34096212-34095809 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 282
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 51

Conread position: 144-555
Cow position: chr3:54881498-54881920 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 274
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 66

Conread position: 144-555
Cow position: chr3:71237899-71238314 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 75

Conread position: 144-559
Cow position: chr3:54945866-54946289 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 122

Conread position: 144-560
Cow position: chr3:13302114-13301680 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 91

Conread position: 144-560
Cow position: chr3:53270568-53271002 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 80

Conread position: 144-561
Cow position: chr3:2393224-2392799 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 94

Conread position: 144-561
Cow position: chr3:57754742-57754305 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 127

Conread position: 144-562
Cow position: chr3:9663445-9662998 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 320
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 140

Conread position: 144-562
Cow position: chr3:10958487-10958073 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 32, 66

Conread position: 144-562
Cow position: chr3:20802888-20802469 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 144-562
Cow position: chr3:26065743-26066158 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 120

Conread position: 144-562
Cow position: chr3:31056260-31055842 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 127

Conread position: 144-562
Cow position: chr3:53384541-53384109 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 144-562
Cow position: chr3:65058443-65058870 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 144-562
Cow position: chr3:67929524-67929088 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 125

Conread position: 144-563
Cow position: chr3:6873503-6873099 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 51

Conread position: 144-563
Cow position: chr3:54434715-54435140 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 127

Conread position: 144-564
Cow position: chr3:3985072-3985489 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 79

Conread position: 144-564
Cow position: chr3:45647881-45648277 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 298
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 76

Conread position: 144-564
Cow position: chr3:79884745-79884307 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 144-564
Cow position: chr3:80564702-80565124 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 58

Conread position: 145-402
Cow position: chr3:42483641-42483904 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 52

Conread position: 145-426
Cow position: chr3:45524006-45524287 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 62

Conread position: 145-460
Cow position: chr3:79592147-79591837 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 127

Conread position: 145-510
Cow position: chr3:55970246-55970611 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 146-357
Cow position: chr3:31501091-31501300 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 120

Conread position: 146-498
Cow position: chr3:26219318-26218960 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 128

Conread position: 146-562
Cow position: chr3:2537995-2538408 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 305
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 91

Conread position: 146-563
Cow position: chr3:26970569-26970983 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 67

Conread position: 147-392
Cow position: chr3:3164751-3164507 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 87

Conread position: 147-392
Cow position: chr3:70333731-70333493 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 73

Conread position: 147-398
Cow position: chr3:44535022-44534764 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 63

Conread position: 147-402
Cow position: chr3:44623154-44622890 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 61

Conread position: 147-415
Cow position: chr3:69849757-69849498 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 48

Conread position: 147-416
Cow position: chr3:42177903-42178167 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 95

Conread position: 147-417
Cow position: chr3:8147920-8147656 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 72

Conread position: 147-423
Cow position: chr3:52650788-52650510 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 125

Conread position: 147-443
Cow position: chr3:19708356-19708071 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 228
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 29, 46

Conread position: 147-446
Cow position: chr3:61171765-61171466 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 147-460
Cow position: chr3:31419446-31419746 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 78

Conread position: 147-460
Cow position: chr3:39661706-39661403 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 49

Conread position: 147-460
Cow position: chr3:74088429-74088126 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 29, 119

Conread position: 147-481
Cow position: chr3:27546090-27545744 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 91

Conread position: 147-484
Cow position: chr3:62321393-62321056 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 127

Conread position: 147-499
Cow position: chr3:49140306-49139943 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 132

Conread position: 147-501
Cow position: chr3:73708794-73709142 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 72

Conread position: 147-503
Cow position: chr3:13353103-13353462 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 11

Conread position: 147-503
Cow position: chr3:14626407-14626052 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 63

Conread position: 147-503
Cow position: chr3:59392365-59392030 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 119

Conread position: 147-508
Cow position: chr3:75046127-75045773 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 43

Conread position: 147-510
Cow position: chr3:53592956-53592582 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 119

Conread position: 147-510
Cow position: chr3:58540788-58540417 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 124

Conread position: 147-510
Cow position: chr3:68627930-68627585 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 63

Conread position: 147-553
Cow position: chr3:7566674-7566259 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 76

Conread position: 147-554
Cow position: chr3:82056373-82055965 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 73

Conread position: 147-555
Cow position: chr3:18497768-18498179 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 11

Conread position: 147-558
Cow position: chr3:13330028-13329626 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 73

Conread position: 147-562
Cow position: chr3:3032140-3032580 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 311
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 39

Conread position: 147-562
Cow position: chr3:3556289-3556719 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 147-562
Cow position: chr3:17456525-17456096 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 132

Conread position: 147-562
Cow position: chr3:20997235-20996831 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 53

Conread position: 147-562
Cow position: chr3:23092238-23091826 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 127

Conread position: 147-562
Cow position: chr3:23169325-23168897 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 127

Conread position: 147-562
Cow position: chr3:26553967-26553579 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 73

Conread position: 147-562
Cow position: chr3:37186578-37186979 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 291
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 73

Conread position: 147-562
Cow position: chr3:39970128-39969692 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 126

Conread position: 147-562
Cow position: chr3:48252638-48253050 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 147-562
Cow position: chr3:59649001-59649424 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 44

Conread position: 147-562
Cow position: chr3:68708258-68707851 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 11

Conread position: 147-562
Cow position: chr3:83490821-83491251 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 147-563
Cow position: chr3:13577441-13577047 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 294
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 73

Conread position: 147-563
Cow position: chr3:48578586-48578996 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 41

Conread position: 147-564
Cow position: chr3:67744883-67744468 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 126

Conread position: 148-562
Cow position: chr3:29360392-29359993 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 61

Conread position: 148-562
Cow position: chr3:49482963-49482543 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 60

Conread position: 148-562
Cow position: chr3:53221761-53222183 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 300
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 28, 12

Conread position: 148-562
Cow position: chr3:74233941-74234352 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 46

Conread position: 148-562
Cow position: chr3:80740318-80740724 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 72

Conread position: 148-563
Cow position: chr3:73764452-73764043 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 149-494
Cow position: chr3:29891669-29891320 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 11

Conread position: 149-510
Cow position: chr3:45534553-45534194 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 27, 117

Conread position: 150-371
Cow position: chr3:82359793-82360010 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 86

Conread position: 150-388
Cow position: chr3:49787154-49787398 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 50

Conread position: 150-502
Cow position: chr3:3738232-3738578 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 124

Conread position: 150-510
Cow position: chr3:2680259-2680618 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 124

Conread position: 150-562
Cow position: chr3:6853753-6853343 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 277
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 60

Conread position: 150-562
Cow position: chr3:31933354-31932953 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 281
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 89

Conread position: 151-561
Cow position: chr3:44932257-44932682 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 121

Conread position: 151-563
Cow position: chr3:26903864-26904271 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 83

Conread position: 151-563
Cow position: chr3:78092756-78092339 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 11

Conread position: 152-562
Cow position: chr3:55992122-55991717 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 86

Conread position: 153-355
Cow position: chr3:11333566-11333362 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 5

Conread position: 153-431
Cow position: chr3:55947326-55947609 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 118

Conread position: 153-562
Cow position: chr3:20675127-20674708 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 5

Conread position: 154-325
Cow position: chr3:35074432-35074600 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 49

Conread position: 154-387
Cow position: chr3:47284589-47284819 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 23, 56

Conread position: 154-402
Cow position: chr3:57554094-57553852 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 43

Conread position: 154-412
Cow position: chr3:16362986-16362729 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 46

Conread position: 154-443
Cow position: chr3:63332562-63332855 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 119

Conread position: 154-460
Cow position: chr3:5045058-5044759 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 46

Conread position: 154-472
Cow position: chr3:49461185-49460860 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 154-484
Cow position: chr3:56619-56298 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 67

Conread position: 154-485
Cow position: chr3:79292586-79292908 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 154-489
Cow position: chr3:79148524-79148201 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 120

Conread position: 154-498
Cow position: chr3:42423579-42423235 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 63

Conread position: 154-498
Cow position: chr3:49650131-49650481 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 126

Conread position: 154-498
Cow position: chr3:59451346-59451697 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 41

Conread position: 154-500
Cow position: chr3:15752876-15752541 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 54

Conread position: 154-503
Cow position: chr3:53572998-53572654 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 66

Conread position: 154-503
Cow position: chr3:55272291-55271947 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 80

Conread position: 154-509
Cow position: chr3:70334950-70334591 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 47

Conread position: 154-510
Cow position: chr3:7678423-7678758 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 65

Conread position: 154-510
Cow position: chr3:70401654-70402001 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 69

Conread position: 154-555
Cow position: chr3:52652322-52651916 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 66

Conread position: 154-555
Cow position: chr3:57577446-57577860 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 87

Conread position: 154-562
Cow position: chr3:11254397-11253994 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 298
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 23, 10

Conread position: 154-562
Cow position: chr3:14465952-14465544 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 23

Conread position: 154-562
Cow position: chr3:29887672-29887269 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 50

Conread position: 154-562
Cow position: chr3:43233255-43233674 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 46

Conread position: 154-564
Cow position: chr3:5374085-5374482 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 154-564
Cow position: chr3:59473864-59474293 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 124

Conread position: 156-445
Cow position: chr3:30055692-30055417 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 44

Conread position: 157-357
Cow position: chr3:61361157-61361358 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 20

Conread position: 157-476
Cow position: chr3:23445135-23444818 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 157-493
Cow position: chr3:35299429-35299754 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 59

Conread position: 157-493
Cow position: chr3:49382707-49383037 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 67

Conread position: 157-503
Cow position: chr3:11987085-11987427 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 31

Conread position: 157-509
Cow position: chr3:55836074-55835716 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 116

Conread position: 158-559
Cow position: chr3:29812999-29813394 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 158-562
Cow position: chr3:68881356-68880960 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 19

Conread position: 159-464
Cow position: chr3:74878832-74878531 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 160-503
Cow position: chr3:48852210-48851872 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 111

Conread position: 160-562
Cow position: chr3:42584300-42584690 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 274
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 107

Conread position: 160-562
Cow position: chr3:71231164-71231569 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 160-562
Cow position: chr3:77224878-77225264 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 63

Conread position: 161-558
Cow position: chr3:5420107-5419720 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 117

Conread position: 162-437
Cow position: chr3:83201768-83201493 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 104

Conread position: 163-372
Cow position: chr3:80922329-80922546 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 55

Conread position: 163-497
Cow position: chr3:46341222-46341561 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 36

Conread position: 163-529
Cow position: chr3:36570289-36569923 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 10, 67

Conread position: 163-562
Cow position: chr3:14725058-14725487 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 285
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 103

Conread position: 164-347
Cow position: chr3:4861451-4861626 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 59

Conread position: 164-454
Cow position: chr3:34937602-34937892 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 61

Conread position: 167-553
Cow position: chr3:11711718-11712103 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 107

Conread position: 168-478
Cow position: chr3:22888147-22887857 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 170-509
Cow position: chr3:76713552-76713212 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 66

Conread position: 173-473
Cow position: chr3:20137080-20136783 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 170

Conread position: 173-478
Cow position: chr3:72668422-72668118 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 107

Conread position: 174-386
Cow position: chr3:56301574-56301368 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 97

Conread position: 174-392
Cow position: chr3:21051064-21050849 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 13

Conread position: 174-449
Cow position: chr3:19752118-19751847 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 150, 62

Conread position: 174-479
Cow position: chr3:6443009-6443311 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 90

Conread position: 174-504
Cow position: chr3:49678896-49679232 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 24

Conread position: 174-510
Cow position: chr3:27940354-27940038 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 32

Conread position: 175-326
Cow position: chr3:23215809-23215654 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 175-391
Cow position: chr3:14717581-14717782 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 101

Conread position: 175-425
Cow position: chr3:55106668-55106420 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 94

Conread position: 175-427
Cow position: chr3:66866625-66866380 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 17

Conread position: 175-478
Cow position: chr3:24433320-24433623 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 93

Conread position: 175-483
Cow position: chr3:42367724-42367436 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 46

Conread position: 175-485
Cow position: chr3:21547327-21547022 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 23

Conread position: 175-488
Cow position: chr3:28648276-28648585 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 95

Conread position: 175-494
Cow position: chr3:26960820-26960499 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 96

Conread position: 175-499
Cow position: chr3:15192339-15192674 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 155, 52

Conread position: 175-502
Cow position: chr3:74134480-74134801 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 33

Conread position: 175-504
Cow position: chr3:19404098-19404397 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 175-504
Cow position: chr3:74119671-74119332 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 23

Conread position: 175-525
Cow position: chr3:17447833-17447496 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 44

Conread position: 175-525
Cow position: chr3:67544099-67543751 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 97

Conread position: 175-562
Cow position: chr3:22734500-22734090 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 114, 54

Conread position: 176-520
Cow position: chr3:18184844-18185190 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 22

Conread position: 176-552
Cow position: chr3:56612132-56612523 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 63, 21

Conread position: 177-554
Cow position: chr3:17134116-17134494 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 178-504
Cow position: chr3:83215031-83215361 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 179-543
Cow position: chr3:16656702-16656336 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 88

Conread position: 182-439
Cow position: chr3:35005559-35005809 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 86

Conread position: 184-392
Cow position: chr3:79340058-79339851 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 137

Conread position: 184-460
Cow position: chr3:25944861-25945147 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 85

Conread position: 184-502
Cow position: chr3:11063162-11063462 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 80

Conread position: 184-503
Cow position: chr3:45211079-45211399 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 38

Conread position: 184-510
Cow position: chr3:4319494-4319815 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 184-562
Cow position: chr3:53790757-53790371 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 87

Conread position: 185-504
Cow position: chr3:49218533-49218206 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 15

Conread position: 185-562
Cow position: chr3:12255259-12255624 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 95

Conread position: 185-562
Cow position: chr3:24468596-24468213 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 75

Conread position: 187-398
Cow position: chr3:25059860-25060075 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 52, 77

Conread position: 187-426
Cow position: chr3:39328187-39328420 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 141, 31

Conread position: 187-564
Cow position: chr3:25477599-25477965 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 79

Conread position: 187-564
Cow position: chr3:70609409-70609798 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 88

Conread position: 187-564
Cow position: chr3:83845691-83846064 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 31

Conread position: 188-504
Cow position: chr3:36375760-36375441 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 80

Conread position: 188-543
Cow position: chr3:44101754-44102117 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 190-484
Cow position: chr3:50069553-50069842 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 19

Conread position: 190-564
Cow position: chr3:5365460-5365838 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 192-459
Cow position: chr3:67698068-67698329 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 12

Conread position: 193-398
Cow position: chr3:73926340-73926131 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 46

Conread position: 193-510
Cow position: chr3:53318191-53318508 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 27, 17

Conread position: 195-562
Cow position: chr3:67520381-67520005 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 196-497
Cow position: chr3:27697187-27696886 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 196-562
Cow position: chr3:20842064-20841708 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 80

Conread position: 197-391
Cow position: chr3:22900196-22900008 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 76

Conread position: 197-462
Cow position: chr3:188656-188928 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 29

Conread position: 197-472
Cow position: chr3:6772801-6772526 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 75

Conread position: 197-478
Cow position: chr3:20262433-20262156 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 72

Conread position: 197-478
Cow position: chr3:72663258-72663540 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 75

Conread position: 197-502
Cow position: chr3:57760295-57760595 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 21

Conread position: 197-533
Cow position: chr3:53240069-53240386 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 131, 34

Conread position: 197-562
Cow position: chr3:54506501-54506877 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 32, 12

Conread position: 197-562
Cow position: chr3:55712222-55712602 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 75

Conread position: 197-563
Cow position: chr3:74846942-74846553 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 55

Conread position: 198-480
Cow position: chr3:3637980-3638253 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 78

Conread position: 198-562
Cow position: chr3:75853537-75853164 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 27

Conread position: 199-562
Cow position: chr3:14598745-14599091 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 69

Conread position: 199-564
Cow position: chr3:49132251-49131908 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 73

Conread position: 200-412
Cow position: chr3:15859871-15859660 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 72

Conread position: 200-475
Cow position: chr3:34556442-34556171 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 71

Conread position: 201-476
Cow position: chr3:75711108-75711376 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 38, 70

Conread position: 201-560
Cow position: chr3:38828563-38828920 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 201-561
Cow position: chr3:49327738-49328104 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 257
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 66

Conread position: 202-409
Cow position: chr3:21693743-21693954 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 68

Conread position: 202-460
Cow position: chr3:53095138-53094877 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 67

Conread position: 202-502
Cow position: chr3:49791011-49790715 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 203-476
Cow position: chr3:10896631-10896892 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 36, 69

Conread position: 205-436
Cow position: chr3:70631819-70632051 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 34, 66

Conread position: 206-486
Cow position: chr3:55109815-55109532 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 12

Conread position: 206-554
Cow position: chr3:74079837-74079475 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 33, 64

Conread position: 208-455
Cow position: chr3:31047147-31046903 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 56

Conread position: 208-460
Cow position: chr3:22844718-22844956 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 135, 38

Conread position: 208-504
Cow position: chr3:30940624-30940906 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 31

Conread position: 208-561
Cow position: chr3:24352669-24353010 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 208-561
Cow position: chr3:74754132-74754485 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 63

Conread position: 209-383
Cow position: chr3:65380958-65381129 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 68

Conread position: 209-460
Cow position: chr3:30438915-30438681 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 209-478
Cow position: chr3:78896454-78896719 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 44

Conread position: 209-483
Cow position: chr3:23448331-23448060 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 11

Conread position: 209-497
Cow position: chr3:66375120-66375412 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 8, 67

Conread position: 209-510
Cow position: chr3:75570643-75570347 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 61

Conread position: 209-510
Cow position: chr3:78894514-78894236 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 27

Conread position: 209-539
Cow position: chr3:34270726-34271044 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 64

Conread position: 209-562
Cow position: chr3:55319098-55318727 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 67

Conread position: 209-563
Cow position: chr3:8060932-8061292 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 209-564
Cow position: chr3:57634078-57634419 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 55

Conread position: 210-413
Cow position: chr3:3062368-3062579 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 21

Conread position: 210-476
Cow position: chr3:7940750-7940487 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 61

Conread position: 210-499
Cow position: chr3:52418760-52419032 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 61

Conread position: 210-509
Cow position: chr3:66884135-66883841 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 61

Conread position: 210-542
Cow position: chr3:55010355-55010023 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 13

Conread position: 210-560
Cow position: chr3:61894368-61894014 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 64

Conread position: 210-562
Cow position: chr3:23105560-23105194 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 61

Conread position: 210-562
Cow position: chr3:53875953-53875591 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 29, 60

Conread position: 210-563
Cow position: chr3:2198688-2199036 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 62

Conread position: 210-564
Cow position: chr3:15751917-15751550 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 67

Conread position: 210-564
Cow position: chr3:18686713-18687074 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 210-564
Cow position: chr3:18725829-18725490 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 50

Conread position: 211-460
Cow position: chr3:13890274-13890531 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 183

Conread position: 213-493
Cow position: chr3:84597150-84596877 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 10

Conread position: 213-507
Cow position: chr3:63269034-63269325 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 48

Conread position: 213-561
Cow position: chr3:54374052-54373687 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 61

Conread position: 213-562
Cow position: chr3:23408542-23408193 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 57

Conread position: 214-464
Cow position: chr3:55434141-55434387 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 22

Conread position: 215-388
Cow position: chr3:27212173-27212348 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 55

Conread position: 215-392
Cow position: chr3:83708157-83707985 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 21

Conread position: 215-460
Cow position: chr3:44837569-44837322 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 12

Conread position: 215-474
Cow position: chr3:20437839-20437588 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 56

Conread position: 215-491
Cow position: chr3:34669917-34669647 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 215-516
Cow position: chr3:67930371-67930074 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 215-550
Cow position: chr3:4050006-4050340 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 24

Conread position: 215-562
Cow position: chr3:3649416-3649068 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 215-563
Cow position: chr3:68146029-68145683 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 21

Conread position: 215-564
Cow position: chr3:28908388-28908043 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 21

Conread position: 216-560
Cow position: chr3:24872531-24872861 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 19

Conread position: 217-554
Cow position: chr3:19793777-19793427 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 29

Conread position: 218-472
Cow position: chr3:1453308-1453060 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 46

Conread position: 218-520
Cow position: chr3:75687625-75687322 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 53

Conread position: 218-561
Cow position: chr3:7661662-7662027 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 230
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 106, 174

Conread position: 218-562
Cow position: chr3:22232838-22232497 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 53

Conread position: 219-456
Cow position: chr3:79271144-79270907 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 52

Conread position: 219-488
Cow position: chr3:74502507-74502242 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 219-504
Cow position: chr3:20678020-20677743 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 53

Conread position: 222-416
Cow position: chr3:23037809-23037610 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 101, 14

Conread position: 222-485
Cow position: chr3:61840096-61840355 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 15, 55

Conread position: 222-510
Cow position: chr3:71238284-71238573 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 171

Conread position: 222-520
Cow position: chr3:59718660-59718964 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 49

Conread position: 222-555
Cow position: chr3:81087802-81087472 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 237, 48

Conread position: 222-560
Cow position: chr3:59597003-59597342 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 47

Conread position: 222-560
Cow position: chr3:79094230-79093892 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 54

Conread position: 222-562
Cow position: chr3:45667530-45667172 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 14

Conread position: 222-563
Cow position: chr3:15052134-15051780 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 223-504
Cow position: chr3:54100899-54100627 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 223-561
Cow position: chr3:26739599-26739254 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 44

Conread position: 223-562
Cow position: chr3:26981883-26982220 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 49

Conread position: 223-564
Cow position: chr3:76268161-76267801 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 22

Conread position: 225-465
Cow position: chr3:81359292-81359048 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 180

Conread position: 225-483
Cow position: chr3:76015114-76015369 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 103, 14

Conread position: 225-560
Cow position: chr3:76922842-76922504 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 47

Conread position: 225-562
Cow position: chr3:68586844-68587190 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 36

Conread position: 225-562
Cow position: chr3:70762302-70761952 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 46

Conread position: 225-564
Cow position: chr3:58765255-58764913 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 225-564
Cow position: chr3:76138300-76138632 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 48

Conread position: 226-435
Cow position: chr3:15992541-15992747 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 9

Conread position: 226-460
Cow position: chr3:81507290-81507057 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 20

Conread position: 226-503
Cow position: chr3:52487458-52487718 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 41

Conread position: 227-403
Cow position: chr3:53192596-53192429 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 9

Conread position: 227-486
Cow position: chr3:62046485-62046745 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 44

Conread position: 227-525
Cow position: chr3:81039921-81039627 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 23, 13

Conread position: 228-488
Cow position: chr3:32787286-32787542 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 39

Conread position: 228-564
Cow position: chr3:19792716-19793070 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 229-527
Cow position: chr3:59034861-59035163 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 95, 10

Conread position: 229-562
Cow position: chr3:55819572-55819920 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 43

Conread position: 230-530
Cow position: chr3:48810808-48810518 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 102, 6

Conread position: 230-562
Cow position: chr3:58960763-58960422 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 43

Conread position: 231-403
Cow position: chr3:15231857-15232028 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 25

Conread position: 233-558
Cow position: chr3:48073044-48072719 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 36

Conread position: 235-494
Cow position: chr3:31850537-31850288 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 120, 37

Conread position: 235-560
Cow position: chr3:23920597-23920257 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 93, 35

Conread position: 236-460
Cow position: chr3:26489251-26489026 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 31

Conread position: 236-494
Cow position: chr3:30222019-30222280 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 236-562
Cow position: chr3:35153455-35153777 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 33

Conread position: 237-510
Cow position: chr3:58973138-58973401 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 114, 33

Conread position: 238-460
Cow position: chr3:75090303-75090530 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 159

Conread position: 239-503
Cow position: chr3:58767106-58767361 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 115, 28

Conread position: 239-510
Cow position: chr3:59884236-59883965 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 35

Conread position: 239-539
Cow position: chr3:84199515-84199809 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 211
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 27

Conread position: 239-559
Cow position: chr3:12978780-12978447 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 89, 26

Conread position: 239-564
Cow position: chr3:4036240-4035935 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 22

Conread position: 240-460
Cow position: chr3:42671377-42671583 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 27

Conread position: 240-510
Cow position: chr3:69144543-69144798 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 30

Conread position: 241-472
Cow position: chr3:41129560-41129777 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 241-498
Cow position: chr3:53508460-53508704 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 237, 27

Conread position: 241-510
Cow position: chr3:24615998-24615746 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 20

Conread position: 245-403
Cow position: chr3:15790398-15790552 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 75, 25

Conread position: 245-496
Cow position: chr3:19585704-19585954 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 28

Conread position: 245-515
Cow position: chr3:8733513-8733245 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 24

Conread position: 245-562
Cow position: chr3:2851052-2850762 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 29

Conread position: 245-562
Cow position: chr3:15153535-15153859 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 25

Conread position: 245-562
Cow position: chr3:77581951-77582277 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 29

Conread position: 246-502
Cow position: chr3:32184177-32183923 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 78, 21

Conread position: 246-510
Cow position: chr3:26874433-26874696 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 33

Conread position: 247-561
Cow position: chr3:21112800-21112472 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 23

Conread position: 247-562
Cow position: chr3:37041255-37041587 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 28

Conread position: 248-510
Cow position: chr3:79645598-79645325 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 21

Conread position: 248-562
Cow position: chr3:2648668-2648337 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 83, 23

Conread position: 253-460
Cow position: chr3:24548995-24548783 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 71, 14

Conread position: 254-564
Cow position: chr3:3883973-3883647 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 212
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 137

Conread position: 255-463
Cow position: chr3:79097950-79098154 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 65

Conread position: 255-562
Cow position: chr3:21015113-21014785 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 29

Conread position: 255-563
Cow position: chr3:17058693-17058375 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 73, 29

Conread position: 256-510
Cow position: chr3:43726926-43727176 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 14

Conread position: 256-560
Cow position: chr3:51033219-51033541 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 28

Conread position: 256-564
Cow position: chr3:48900490-48900157 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 44

Conread position: 257-562
Cow position: chr3:34871418-34871739 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 13

Conread position: 260-392
Cow position: chr3:76169433-76169296 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 260-501
Cow position: chr3:73820518-73820274 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 261-439
Cow position: chr3:80953499-80953680 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 135

Conread position: 261-494
Cow position: chr3:56943751-56943514 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 135, 30

Conread position: 264-555
Cow position: chr3:1517658-1517349 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 136

Conread position: 264-564
Cow position: chr3:60389623-60389925 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 88

Conread position: 265-447
Cow position: chr3:38710860-38710676 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 78

Conread position: 265-460
Cow position: chr3:11200124-11199925 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 130

Conread position: 265-509
Cow position: chr3:32457057-32457297 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 66, 88

Conread position: 265-561
Cow position: chr3:59040424-59040740 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 57, 102

Conread position: 266-452
Cow position: chr3:34784065-34784260 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 266-521
Cow position: chr3:84243910-84243653 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 127

Conread position: 266-563
Cow position: chr3:3889709-3889405 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 112

Conread position: 267-484
Cow position: chr3:80468816-80468599 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 61, 38

Conread position: 267-510
Cow position: chr3:59621785-59621543 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 267-562
Cow position: chr3:32610109-32610415 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 195
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 51, 161

Conread position: 267-562
Cow position: chr3:70334105-70333798 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 98

Conread position: 267-564
Cow position: chr3:20993670-20993968 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 61, 117

Conread position: 268-510
Cow position: chr3:10103908-10104145 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 18

Conread position: 270-415
Cow position: chr3:9638509-9638364 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 6

Conread position: 270-503
Cow position: chr3:5366632-5366866 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 88

Conread position: 270-562
Cow position: chr3:60264854-60264551 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 32

Conread position: 270-564
Cow position: chr3:76024381-76024676 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 77

Conread position: 271-509
Cow position: chr3:24935233-24935468 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 60, 82

Conread position: 272-562
Cow position: chr3:46541964-46541680 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 120

Conread position: 273-562
Cow position: chr3:72342109-72342419 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 55, 99

Conread position: 276-503
Cow position: chr3:54551839-54551615 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 25

Conread position: 277-493
Cow position: chr3:83822714-83822499 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 107

Conread position: 278-494
Cow position: chr3:17235339-17235128 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 17

Conread position: 278-510
Cow position: chr3:22509896-22510130 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 116

Conread position: 278-510
Cow position: chr3:79196629-79196865 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 109

Conread position: 278-510
Cow position: chr3:84175956-84175717 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 118

Conread position: 278-562
Cow position: chr3:61116988-61116701 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 86

Conread position: 278-562
Cow position: chr3:78093514-78093222 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 67

Conread position: 278-564
Cow position: chr3:76155857-76156159 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 105

Conread position: 279-491
Cow position: chr3:35056108-35055892 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 68

Conread position: 279-504
Cow position: chr3:18144251-18144019 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 118

Conread position: 279-562
Cow position: chr3:11276700-11276429 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 241, 39

Conread position: 280-561
Cow position: chr3:14194307-14194020 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 9

Conread position: 280-563
Cow position: chr3:54740017-54739728 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 281-555
Cow position: chr3:61323206-61323489 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 92

Conread position: 282-562
Cow position: chr3:59604724-59605013 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 66, 38

Conread position: 283-504
Cow position: chr3:56678479-56678251 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 64

Conread position: 283-555
Cow position: chr3:8901517-8901777 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 49

Conread position: 283-561
Cow position: chr3:58134813-58134514 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 112

Conread position: 283-562
Cow position: chr3:22221195-22221497 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 6

Conread position: 283-562
Cow position: chr3:61224868-61224578 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 47

Conread position: 285-560
Cow position: chr3:73298963-73299234 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 37, 65

Conread position: 285-562
Cow position: chr3:48468059-48468347 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 58

Conread position: 287-459
Cow position: chr3:6403300-6403472 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 70

Conread position: 288-510
Cow position: chr3:1785362-1785141 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 65

Conread position: 291-561
Cow position: chr3:48459445-48459159 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 8

Conread position: 292-514
Cow position: chr3:33693701-33693927 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 70

Conread position: 293-510
Cow position: chr3:58318069-58317843 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 35, 106

Conread position: 293-562
Cow position: chr3:3656395-3656686 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 109

Conread position: 293-562
Cow position: chr3:55094350-55094060 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 54

Conread position: 293-562
Cow position: chr3:58527282-58527548 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 185, 50

Conread position: 294-504
Cow position: chr3:72504013-72503797 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 102

Conread position: 295-509
Cow position: chr3:84157562-84157339 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 103

Conread position: 295-561
Cow position: chr3:15443843-15443556 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 100

Conread position: 296-562
Cow position: chr3:15951024-15950746 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 59

Conread position: 297-561
Cow position: chr3:18059590-18059874 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 31, 97

Conread position: 297-562
Cow position: chr3:19711446-19711166 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 76

Conread position: 298-504
Cow position: chr3:27727940-27727733 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 95

Conread position: 298-510
Cow position: chr3:33329703-33329924 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 99

Conread position: 300-560
Cow position: chr3:65019974-65019684 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 94

Conread position: 302-504
Cow position: chr3:11640624-11640832 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 94

Conread position: 302-562
Cow position: chr3:31361312-31361594 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 7

Conread position: 303-522
Cow position: chr3:3316918-3316699 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 57

Conread position: 304-499
Cow position: chr3:58940025-58940219 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 46

Conread position: 308-504
Cow position: chr3:26229996-26230208 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 83

Conread position: 311-553
Cow position: chr3:9026182-9025920 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 81

Conread position: 311-563
Cow position: chr3:56483416-56483673 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 12, 189

Conread position: 312-562
Cow position: chr3:39996981-39996723 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 36

Conread position: 312-563
Cow position: chr3:14546909-14547171 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 10

Conread position: 313-562
Cow position: chr3:75778157-75777898 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 34

Conread position: 314-561
Cow position: chr3:49363020-49363277 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 32

Conread position: 314-564
Cow position: chr3:41550469-41550221 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 17, 80

Conread position: 319-562
Cow position: chr3:21867126-21866867 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 73

Conread position: 320-483
Cow position: chr3:81277555-81277390 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 72

Conread position: 320-510
Cow position: chr3:1890197-1890002 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 81

Conread position: 322-561
Cow position: chr3:23203318-23203059 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 72

Conread position: 323-495
Cow position: chr3:74088781-74088611 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 32

Conread position: 323-495
Cow position: chr3:83928166-83928336 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 154, 37

Conread position: 323-497
Cow position: chr3:66631432-66631259 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 153, 37

Conread position: 323-500
Cow position: chr3:48478114-48477941 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 68

Conread position: 323-503
Cow position: chr3:53704048-53703866 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 153
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 70

Conread position: 323-504
Cow position: chr3:40145385-40145563 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 41

Conread position: 323-504
Cow position: chr3:74900720-74900544 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 31

Conread position: 323-504
Cow position: chr3:83988449-83988631 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 71

Conread position: 323-539
Cow position: chr3:84250626-84250404 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 32, 91

Conread position: 323-555
Cow position: chr3:51609268-51609020 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 63

Conread position: 323-562
Cow position: chr3:23804435-23804673 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 195
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 25

Conread position: 323-562
Cow position: chr3:39873779-39873537 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 69

Conread position: 323-563
Cow position: chr3:75238376-75238633 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 156, 66

Conread position: 323-564
Cow position: chr3:53904383-53904608 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 172, 22

Conread position: 324-560
Cow position: chr3:36160276-36160031 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 68

Conread position: 325-504
Cow position: chr3:27976606-27976425 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 67

Conread position: 325-560
Cow position: chr3:64196744-64196994 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 67

Conread position: 326-465
Cow position: chr3:45222234-45222092 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 66

Conread position: 326-539
Cow position: chr3:23667544-23667747 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 30

Conread position: 326-561
Cow position: chr3:10668958-10668709 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 64

Conread position: 326-564
Cow position: chr3:82366055-82366302 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 15

Conread position: 328-561
Cow position: chr3:10591595-10591343 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 73

Conread position: 329-562
Cow position: chr3:15160450-15160688 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 150, 22

Conread position: 330-503
Cow position: chr3:7581791-7581620 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 144, 59

Conread position: 333-562
Cow position: chr3:35074811-35075043 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 145, 21

Conread position: 334-563
Cow position: chr3:39248093-39247860 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 16

Conread position: 335-550
Cow position: chr3:2483932-2484161 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 62

Conread position: 337-494
Cow position: chr3:63657931-63657772 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 25, 49

Conread position: 338-529
Cow position: chr3:56704387-56704196 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 154
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 22, 17

Conread position: 338-562
Cow position: chr3:12090607-12090848 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 76

Conread position: 338-562
Cow position: chr3:56949151-56948925 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 140, 5

Conread position: 338-563
Cow position: chr3:11715934-11716146 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 13

Conread position: 338-563
Cow position: chr3:54067731-54067966 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 149, 56

Conread position: 340-541
Cow position: chr3:36913987-36914190 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 21

Conread position: 341-556
Cow position: chr3:29334481-29334245 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 341-562
Cow position: chr3:4548964-4549188 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 48

Conread position: 343-496
Cow position: chr3:11292312-11292157 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 49

Conread position: 343-510
Cow position: chr3:68130345-68130185 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 40

Conread position: 343-562
Cow position: chr3:30357465-30357680 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 155, 10

Conread position: 344-562
Cow position: chr3:81234329-81234559 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 45

Conread position: 346-564
Cow position: chr3:5040365-5040130 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 143, 43

Conread position: 347-562
Cow position: chr3:22165472-22165244 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 42

Conread position: 348-489
Cow position: chr3:11606257-11606404 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 42

Conread position: 348-498
Cow position: chr3:68059259-68059407 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 348-504
Cow position: chr3:21641932-21642086 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 37

Conread position: 348-516
Cow position: chr3:21997844-21997676 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 130, 35

Conread position: 348-561
Cow position: chr3:3698602-3698814 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 42

Conread position: 348-561
Cow position: chr3:75173636-75173430 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 130, 43

Conread position: 348-564
Cow position: chr3:31804821-31804597 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 9

Conread position: 348-564
Cow position: chr3:71423608-71423396 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 47

Conread position: 350-507
Cow position: chr3:57877512-57877668 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 39

Conread position: 350-510
Cow position: chr3:59828446-59828288 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 128, 5

Conread position: 350-562
Cow position: chr3:40213087-40212864 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 129, 37

Conread position: 350-562
Cow position: chr3:46792330-46792554 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 40

Conread position: 350-562
Cow position: chr3:49996778-49996546 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 50

Conread position: 351-510
Cow position: chr3:2637873-2638031 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 43

Conread position: 351-510
Cow position: chr3:7427949-7428101 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 39

Conread position: 351-539
Cow position: chr3:74787378-74787571 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 31

Conread position: 351-561
Cow position: chr3:11281713-11281939 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 36

Conread position: 351-564
Cow position: chr3:69650942-69650725 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 37

Conread position: 352-562
Cow position: chr3:74644505-74644731 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 128, 39

Conread position: 353-522
Cow position: chr3:8814163-8813996 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 125, 24

Conread position: 354-497
Cow position: chr3:64373207-64373064 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 36

Conread position: 354-498
Cow position: chr3:20515868-20515725 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 124, 31

Conread position: 354-507
Cow position: chr3:67959965-67959820 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 6

Conread position: 354-509
Cow position: chr3:46305416-46305558 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 32

Conread position: 354-530
Cow position: chr3:5305748-5305923 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 124, 30

Conread position: 354-562
Cow position: chr3:16107407-16107204 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 35

Conread position: 354-562
Cow position: chr3:71703428-71703629 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 354-562
Cow position: chr3:79271762-79271538 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 131, 31

Conread position: 356-564
Cow position: chr3:909681-909476 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 33

Conread position: 357-510
Cow position: chr3:28258048-28258198 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 121, 37

Conread position: 357-562
Cow position: chr3:31554903-31555105 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 150, 37

Conread position: 359-551
Cow position: chr3:39988280-39988092 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 24

Conread position: 359-562
Cow position: chr3:1011441-1011663 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 30

Conread position: 359-563
Cow position: chr3:52456873-52457081 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 25

Conread position: 359-564
Cow position: chr3:11229410-11229198 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 35

Conread position: 359-564
Cow position: chr3:23753455-23753657 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 35

Conread position: 360-562
Cow position: chr3:15973522-15973741 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 119, 29

Conread position: 361-563
Cow position: chr3:40100760-40100557 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 117, 33

Conread position: 362-503
Cow position: chr3:35624586-35624448 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 362-562
Cow position: chr3:54905576-54905777 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 116, 21

Conread position: 364-562
Cow position: chr3:4120406-4120200 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 113, 25

Conread position: 364-562
Cow position: chr3:10732850-10733049 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 122, 25

Conread position: 364-563
Cow position: chr3:41863584-41863794 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 113, 21

Conread position: 365-562
Cow position: chr3:57846969-57846780 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 113, 29

Conread position: 369-563
Cow position: chr3:24596458-24596261 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 20

Conread position: 369-564
Cow position: chr3:26759829-26760030 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 21

Conread position: 371-562
Cow position: chr3:27246995-27246796 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 371-564
Cow position: chr3:22924408-22924207 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 99, 26

Conread position: 372-562
Cow position: chr3:73335252-73335450 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 103, 17

Conread position: 374-555
Cow position: chr3:77276488-77276301 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 15

Conread position: 374-562
Cow position: chr3:28902789-28902591 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 20

Conread position: 375-501
Cow position: chr3:11705222-11705347 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 14

Conread position: 375-561
Cow position: chr3:28897048-28896851 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 14

Conread position: 375-562
Cow position: chr3:14518108-14517910 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 14

Conread position: 377-561
Cow position: chr3:18831394-18831588 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 51, 12

Conread position: 377-562
Cow position: chr3:46559742-46559545 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 121, 12

Conread position: 377-564
Cow position: chr3:22092122-22092298 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 12

Conread position: 379-524
Cow position: chr3:36189862-36190012 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 380-561
Cow position: chr3:3401523-3401711 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 96, 15

Conread position: 380-561
Cow position: chr3:31115296-31115108 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 381-562
Cow position: chr3:56943951-56943759 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 382-504
Cow position: chr3:1534129-1534005 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 383-504
Cow position: chr3:15683173-15683054 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 13

Conread position: 383-520
Cow position: chr3:81065260-81065394 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 46

Conread position: 383-562
Cow position: chr3:18700134-18699937 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 383-562
Cow position: chr3:59317678-59317871 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 76

Conread position: 383-563
Cow position: chr3:28323194-28323382 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 15

Conread position: 384-556
Cow position: chr3:61024045-61023855 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 384-562
Cow position: chr3:58101657-58101846 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 67

Conread position: 384-562
Cow position: chr3:59681926-59681736 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 58, 64

Conread position: 385-505
Cow position: chr3:79339600-79339480 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 43

Conread position: 385-562
Cow position: chr3:985993-986186 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 91

Conread position: 385-562
Cow position: chr3:4271351-4271536 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 161

Conread position: 385-562
Cow position: chr3:47199148-47198955 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 385-562
Cow position: chr3:59885519-59885702 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 99, 46

Conread position: 385-562
Cow position: chr3:70402623-70402809 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 93, 55

Conread position: 385-562
Cow position: chr3:76056306-76056117 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 0

Conread position: 385-563
Cow position: chr3:80023330-80023143 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 38

Conread position: 386-510
Cow position: chr3:41366730-41366603 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 387-530
Cow position: chr3:45314325-45314467 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 128

Conread position: 387-560
Cow position: chr3:10173186-10173013 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 90, 113

Conread position: 387-562
Cow position: chr3:67407385-67407196 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 387-562
Cow position: chr3:75966800-75966611 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 30

Conread position: 387-564
Cow position: chr3:8526383-8526206 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 36

Conread position: 387-564
Cow position: chr3:26783526-26783334 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 56

Conread position: 387-564
Cow position: chr3:50350988-50350805 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 49, 99

Conread position: 388-510
Cow position: chr3:61133621-61133743 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 6

Conread position: 388-557
Cow position: chr3:62370037-62370223 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 45

Conread position: 388-562
Cow position: chr3:6900897-6901067 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 96

Conread position: 388-562
Cow position: chr3:23037527-23037337 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 8

Conread position: 389-562
Cow position: chr3:25038009-25037832 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 91

Conread position: 389-563
Cow position: chr3:54557657-54557838 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 0

Conread position: 391-514
Cow position: chr3:15660305-15660186 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 20

Conread position: 391-561
Cow position: chr3:27286503-27286685 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 391-562
Cow position: chr3:84154400-84154576 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 38

Conread position: 393-533
Cow position: chr3:35285030-35285174 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 393-562
Cow position: chr3:76168645-76168458 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 394-562
Cow position: chr3:32127417-32127248 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 98

Conread position: 396-560
Cow position: chr3:6579478-6579649 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 28

Conread position: 396-563
Cow position: chr3:81401107-81400934 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 100, 58

Conread position: 396-564
Cow position: chr3:2016425-2016604 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 173

Conread position: 397-561
Cow position: chr3:74069589-74069744 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 399-502
Cow position: chr3:62186144-62186248 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 399-503
Cow position: chr3:4167282-4167178 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 93

Conread position: 399-509
Cow position: chr3:52634101-52634211 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 24

Conread position: 399-557
Cow position: chr3:83934718-83934890 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 399-562
Cow position: chr3:3164117-3163944 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 399-562
Cow position: chr3:16362512-16362344 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 134

Conread position: 399-562
Cow position: chr3:79207710-79207544 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 108

Conread position: 401-504
Cow position: chr3:75772790-75772895 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 401-535
Cow position: chr3:4086869-4086734 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 401-562
Cow position: chr3:80923074-80923236 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 43

Conread position: 401-564
Cow position: chr3:12899945-12899772 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 50

Conread position: 401-564
Cow position: chr3:70333226-70333056 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 28

Conread position: 402-560
Cow position: chr3:31489716-31489875 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 23

Conread position: 402-562
Cow position: chr3:31352879-31352713 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 122

Conread position: 403-560
Cow position: chr3:68624215-68624388 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 15

Conread position: 404-560
Cow position: chr3:22094601-22094445 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 84

Conread position: 405-510
Cow position: chr3:47284812-47284917 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 84

Conread position: 406-563
Cow position: chr3:77653928-77654092 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 12

Conread position: 407-563
Cow position: chr3:73514047-73513891 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 127, 96

Conread position: 409-563
Cow position: chr3:12637512-12637676 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 410-564
Cow position: chr3:53249497-53249658 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 29

Conread position: 414-562
Cow position: chr3:11607830-11607988 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 33

Conread position: 429-563
Cow position: chr3:43527761-43527622 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 455-562
Cow position: chr3:14000502-14000387 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 112

Conread position: 458-562
Cow position: chr3:15952354-15952464 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Show alignments to all cow chromosomes.