• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055G04.5
        

               
Conread position:
               
1-114
               

               
Cow position:
               
chr25:34967401-34967513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr25:23998816-23998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr25:3744637-3744760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr25:30624975-30625105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr25:13223008-13222875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr25:9107416-9107550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr25:22348355-22348508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 94
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:28597502-28597656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 140
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr25:1840432-1840255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr25:26306096-26306275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr25:6133982-6134164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr25:7379039-7379224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr25:11276660-11276471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr25:4948070-4947869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 100
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:36555581-36555796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 93
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:11432835-11433072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:9843284-9843056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
150, 94
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:19363951-19364181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:36872466-36872242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
181, 94
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:11051637-11051397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:21668357-21668108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr25:7673409-7673139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 144
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:5474122-5474368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
221, 93
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:6688053-6687808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
149, 87
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:8961878-8961632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:12509903-12510163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr25:26679334-26679066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 93
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr25:13443302-13443569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:17190639-17190927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
202, 71
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr25:7750560-7750259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 95
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:25861243-25861555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr25:17704852-17704545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 95
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr25:8157403-8157715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:13272677-13272363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr25:22179024-22178715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:12319245-12319550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
146, 26
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr25:2624903-2624591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 73
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr25:23244894-23245222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 94
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr25:7008021-7007699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr25:34170054-34169726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr25:26338566-26338210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
92, 149
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr25:61758-61421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
222, 95
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:13380493-13380853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr25:35826173-35826517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr25:10504233-10504585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
180, 82
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr25:24669341-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 43
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr25:37448537-37448185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr25:7306399-7306041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr25:20785481-20785840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:19679462-19679082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:36762213-36761846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 95
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:37637560-37637914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
252, 95
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr25:15254240-15254594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr25:38958063-38957715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 72
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr25:15273781-15273425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 95
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr25:10407306-10407684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 143
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:20461210-20460856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
254, 25
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:21024097-21024483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 5
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:26087629-26087248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:26224921-26225306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
179, 95
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr25:38982201-38981846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
180, 73
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr25:10643201-10643579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
146, 95
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr25:11661709-11662087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr25:27531162-27531534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 145
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:788366-788002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:7641342-7641722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr25:30852875-30852505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
123, 94
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:14791862-14791483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:16867349-16866962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 98
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:16921688-16922062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:21191597-21191217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 95
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:21192832-21193213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 55
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:21208863-21209218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 14
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:23053664-23053286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
182, 25
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:28187837-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 95
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr25:30319345-30319719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:7216932-7216557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:22531389-22531016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 97
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:26701134-26700769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:33256461-33256098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 95
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr25:36081983-36081604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr25:27821519-27821140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr25:33457840-33457436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 94
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:7581319-7581701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:20023276-20023670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr25:14196969-14196581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr25:9990002-9990368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr25:20008241-20007861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
174, 136
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr25:23917949-23917563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr25:14513223-14512822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 249
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr25:18721012-18721404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr25:11585626-11585199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 95
               

               
Conread position:
               
2-246
               

               
Cow position:
               
chr25:33686578-33686815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr25:22315312-22314933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr25:13569074-13569437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
181, 13
               

               
Conread position:
               
3-153
               

               
Cow position:
               
chr25:18810449-18810300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr25:7012532-7012361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr25:41150859-41151122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr25:4681332-4681046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 22
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr25:2136456-2136108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
3-371
               

               
Cow position:
               
chr25:20076603-20076234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 93
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr25:12778435-12778797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr25:11436699-11437072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
3-386
               

               
Cow position:
               
chr25:14833556-14833928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr25:10156675-10156304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr25:36021427-36021247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr25:37331935-37332130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr25:19478780-19478474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 92
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr25:6961048-6961380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 89
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr25:36746345-36746696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr25:6682957-6683316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 92
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr25:10949476-10949809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr25:30279103-30279465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 96
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr25:33550615-33550249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 8
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr25:19129958-19129590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 7
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr25:15714978-15714617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
4-377
               

               
Cow position:
               
chr25:38850388-38850756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr25:3992884-3992523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr25:25051272-25051651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 102
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr25:8120885-8120507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 57
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr25:17975273-17975637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
4-382
               

               
Cow position:
               
chr25:26238967-26238601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr25:7799651-7799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
175, 45
               

               
Conread position:
               
5-251
               

               
Cow position:
               
chr25:12609444-12609204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
5-321
               

               
Cow position:
               
chr25:26089709-26090025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 91
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr25:12116895-12117243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr25:4521737-4522087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 66
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr25:21245501-21245876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 7
               

               
Conread position:
               
6-177
               

               
Cow position:
               
chr25:36019566-36019733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr25:23505155-23504973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
150, 89
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr25:21893441-21893173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr25:18905988-18905692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr25:14720847-14720538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
244, 89
               

               
Conread position:
               
6-358
               

               
Cow position:
               
chr25:18266267-18265917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr25:4547615-4547977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 93
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr25:21894782-21895151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 56
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr25:24573168-24572796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 71
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr25:31732220-31732490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
7-289
               

               
Cow position:
               
chr25:22750905-22751190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
173, 89
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr25:20624834-20625205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr25:36036677-36037055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 89
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr25:4489011-4488793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 43
               

               
Conread position:
               
10-140
               

               
Cow position:
               
chr25:37606459-37606331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr25:34768633-34768935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr25:18075760-18075405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
12-177
               

               
Cow position:
               
chr25:13768067-13767904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr25:14809370-14809203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
169, 83
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chr25:40931370-40931194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
12-272
               

               
Cow position:
               
chr25:34978766-34979029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
12-379
               

               
Cow position:
               
chr25:23829032-23829384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 83
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr25:26524053-26523709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr25:5756780-5756420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
259, 58
               

               
Conread position:
               
14-317
               

               
Cow position:
               
chr25:36017627-36017334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
16-305
               

               
Cow position:
               
chr25:38569382-38569660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
171, 53
               

               
Conread position:
               
16-381
               

               
Cow position:
               
chr25:6227128-6226771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 80
               

               
Conread position:
               
16-394
               

               
Cow position:
               
chr25:18131159-18130792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
17-360
               

               
Cow position:
               
chr25:34674560-34674213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
17-381
               

               
Cow position:
               
chr25:4898189-4897827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
19-126
               

               
Cow position:
               
chr25:14211719-14211612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
19-352
               

               
Cow position:
               
chr25:15377416-15377092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
24-296
               

               
Cow position:
               
chr25:26259403-26259680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
25-303
               

               
Cow position:
               
chr25:29136076-29136352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
25-353
               

               
Cow position:
               
chr25:22369469-22369151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
206, 71
               

               
Conread position:
               
25-353
               

               
Cow position:
               
chr25:41132276-41132597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
25-377
               

               
Cow position:
               
chr25:13709101-13708751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr25:12817449-12817106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr25:23351481-23351129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr25:6470124-6470486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
66, 341
               

               
Conread position:
               
25-381
               

               
Cow position:
               
chr25:18564570-18564225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
98, 55
               

               
Conread position:
               
25-382
               

               
Cow position:
               
chr25:41097101-41097462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
25-384
               

               
Cow position:
               
chr25:2046476-2046827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
25-392
               

               
Cow position:
               
chr25:5846725-5847086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
157, 74
               

               
Conread position:
               
26-247
               

               
Cow position:
               
chr25:20523151-20523367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
26-306
               

               
Cow position:
               
chr25:20133231-20133510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
155, 70
               

               
Conread position:
               
26-364
               

               
Cow position:
               
chr25:16319057-16319385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
26-365
               

               
Cow position:
               
chr25:38135833-38135493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr25:21951213-21950866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 146
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr25:24452077-24452428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr25:40321205-40321552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 52
               

               
Conread position:
               
26-376
               

               
Cow position:
               
chr25:1838324-1837975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
26-378
               

               
Cow position:
               
chr25:11829840-11830163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
26-379
               

               
Cow position:
               
chr25:14118174-14117839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 33
               

               
Conread position:
               
26-381
               

               
Cow position:
               
chr25:17658694-17658345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
26-384
               

               
Cow position:
               
chr25:22296943-22297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
26-386
               

               
Cow position:
               
chr25:5407825-5407474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr25:15634387-15634611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
27-368
               

               
Cow position:
               
chr25:13122258-13121916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
167, 71
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr25:41355713-41356064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
167, 49
               

               
Conread position:
               
27-382
               

               
Cow position:
               
chr25:17598411-17598765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
27-384
               

               
Cow position:
               
chr25:17566669-17566313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 69
               

               
Conread position:
               
27-390
               

               
Cow position:
               
chr25:6238209-6237844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
28-246
               

               
Cow position:
               
chr25:11066062-11066284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
28-292
               

               
Cow position:
               
chr25:5921025-5920753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
28-295
               

               
Cow position:
               
chr25:17991506-17991768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
201, 67
               

               
Conread position:
               
28-305
               

               
Cow position:
               
chr25:17342539-17342255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
28-378
               

               
Cow position:
               
chr25:18294233-18294581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
28-381
               

               
Cow position:
               
chr25:9847869-9847514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
165, 70
               

               
Conread position:
               
28-381
               

               
Cow position:
               
chr25:33959171-33959530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
28-385
               

               
Cow position:
               
chr25:6463950-6464301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
28-392
               

               
Cow position:
               
chr25:20402628-20402999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 68
               

               
Conread position:
               
28-409
               

               
Cow position:
               
chr25:11139719-11139352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
29-315
               

               
Cow position:
               
chr25:6978059-6977774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
29-371
               

               
Cow position:
               
chr25:37594486-37594154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
153, 67
               

               
Conread position:
               
29-378
               

               
Cow position:
               
chr25:40956905-40957253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
29-383
               

               
Cow position:
               
chr25:6474007-6474370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
30-386
               

               
Cow position:
               
chr25:11131663-11131310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
31-377
               

               
Cow position:
               
chr25:16064970-16064631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
31-380
               

               
Cow position:
               
chr25:35612235-35612570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
303, 65
               

               
Conread position:
               
33-347
               

               
Cow position:
               
chr25:12840642-12840954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
106, 63
               

               
Conread position:
               
36-306
               

               
Cow position:
               
chr25:12755406-12755686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 235
               

               
Conread position:
               
36-312
               

               
Cow position:
               
chr25:27801351-27801089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
36-316
               

               
Cow position:
               
chr25:17144501-17144227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
36-343
               

               
Cow position:
               
chr25:29826483-29826178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
36-352
               

               
Cow position:
               
chr25:21289418-21289099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
36-355
               

               
Cow position:
               
chr25:20069787-20069476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr25:14467021-14467335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
36-379
               

               
Cow position:
               
chr25:23410731-23410394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
36-381
               

               
Cow position:
               
chr25:20348942-20348588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
36-387
               

               
Cow position:
               
chr25:18000458-18000790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
36-389
               

               
Cow position:
               
chr25:22909784-22910120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
221, 11
               

               
Conread position:
               
37-361
               

               
Cow position:
               
chr25:22575453-22575768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
37-378
               

               
Cow position:
               
chr25:18161358-18161035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 10
               

               
Conread position:
               
37-400
               

               
Cow position:
               
chr25:5834175-5834541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
38-294
               

               
Cow position:
               
chr25:11325067-11325325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
38-341
               

               
Cow position:
               
chr25:29312263-29312572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 9
               

               
Conread position:
               
38-391
               

               
Cow position:
               
chr25:8576765-8576414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr25:24052034-24051827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
41-278
               

               
Cow position:
               
chr25:9349215-9349443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
134, 59
               

               
Conread position:
               
41-362
               

               
Cow position:
               
chr25:18988458-18988126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
129, 55
               

               
Conread position:
               
42-349
               

               
Cow position:
               
chr25:38425428-38425127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
42-360
               

               
Cow position:
               
chr25:20019936-20020236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr25:10748434-10748757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
141, 5
               

               
Conread position:
               
42-377
               

               
Cow position:
               
chr25:35347970-35347640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
42-381
               

               
Cow position:
               
chr25:3145911-3145576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
42-381
               

               
Cow position:
               
chr25:41107821-41107488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
138, 40
               

               
Conread position:
               
42-418
               

               
Cow position:
               
chr25:14570440-14570070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 5
               

               
Conread position:
               
43-317
               

               
Cow position:
               
chr25:16714203-16714480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
189, 53
               

               
Conread position:
               
43-368
               

               
Cow position:
               
chr25:12081256-12081572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
45-303
               

               
Cow position:
               
chr25:26134107-26133846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
45-341
               

               
Cow position:
               
chr25:10217985-10218281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
45-358
               

               
Cow position:
               
chr25:41122459-41122147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
45-360
               

               
Cow position:
               
chr25:12293683-12294000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
137, 56
               

               
Conread position:
               
45-365
               

               
Cow position:
               
chr25:8675915-8675593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
45-365
               

               
Cow position:
               
chr25:13961130-13960808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
45-365
               

               
Cow position:
               
chr25:26283086-26282770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
45-370
               

               
Cow position:
               
chr25:21458657-21458328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
45-371
               

               
Cow position:
               
chr25:13099414-13099740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
45-371
               

               
Cow position:
               
chr25:25753932-25754256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
45-371
               

               
Cow position:
               
chr25:31230178-31230483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
45-376
               

               
Cow position:
               
chr25:23406774-23407108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr25:6885907-6886244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr25:13788018-13787684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr25:14274493-14274174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
186, 14
               

               
Conread position:
               
45-378
               

               
Cow position:
               
chr25:22412414-22412746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
45-380
               

               
Cow position:
               
chr25:20651340-20650997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:379914-380251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:5539486-5539152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:25510960-25510622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 53
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:26654971-26654637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:26848978-26849318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:27868874-27868540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:34012688-34013024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
45-381
               

               
Cow position:
               
chr25:36391889-36392234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
45-382
               

               
Cow position:
               
chr25:10699217-10698883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
45-382
               

               
Cow position:
               
chr25:12176120-12176469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
45-382
               

               
Cow position:
               
chr25:12260825-12261165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
46-352
               

               
Cow position:
               
chr25:6947993-6948299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
46-367
               

               
Cow position:
               
chr25:18487731-18487418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
46-378
               

               
Cow position:
               
chr25:33663842-33664163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
47-361
               

               
Cow position:
               
chr25:24405671-24405986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
47-366
               

               
Cow position:
               
chr25:5836895-5837221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
47-381
               

               
Cow position:
               
chr25:16241900-16242239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
48-354
               

               
Cow position:
               
chr25:21541616-21541304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 48
               

               
Conread position:
               
48-381
               

               
Cow position:
               
chr25:8230821-8231152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
49-234
               

               
Cow position:
               
chr25:26642647-26642459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
49-365
               

               
Cow position:
               
chr25:2194991-2194693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
204, 39
               

               
Conread position:
               
49-381
               

               
Cow position:
               
chr25:18236309-18236643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
50-250
               

               
Cow position:
               
chr25:7449859-7449668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
131, 46
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr25:24103878-24103549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr25:8235177-8235510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr25:17538350-17538683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr25:28273378-28273045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr25:33691617-33691284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr25:35554745-35554413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
50-382
               

               
Cow position:
               
chr25:18182176-18181843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
50-388
               

               
Cow position:
               
chr25:15275187-15274851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
51-303
               

               
Cow position:
               
chr25:13672453-13672196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
53-381
               

               
Cow position:
               
chr25:12097896-12097572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
120, 45
               

               
Conread position:
               
57-386
               

               
Cow position:
               
chr25:8512035-8512366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr25:9956987-9957289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
58-387
               

               
Cow position:
               
chr25:9754045-9754351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
174, 38
               

               
Conread position:
               
60-357
               

               
Cow position:
               
chr25:11666697-11666410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
169, 36
               

               
Conread position:
               
64-379
               

               
Cow position:
               
chr25:15433850-15433536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
65-381
               

               
Cow position:
               
chr25:22203645-22203960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
69-381
               

               
Cow position:
               
chr25:5341693-5341381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
71-357
               

               
Cow position:
               
chr25:18293793-18293511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
72-379
               

               
Cow position:
               
chr25:30035586-30035284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
72-381
               

               
Cow position:
               
chr25:34672554-34672863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
73-382
               

               
Cow position:
               
chr25:36535397-36535703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
74-355
               

               
Cow position:
               
chr25:1735285-1735560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
181, 22
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr25:8560904-8560616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr25:14266483-14266770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
74-380
               

               
Cow position:
               
chr25:12239112-12239408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
74-381
               

               
Cow position:
               
chr25:20496567-20496270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
75-379
               

               
Cow position:
               
chr25:36779535-36779226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
77-383
               

               
Cow position:
               
chr25:25827503-25827193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr25:15319951-15319652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
78-381
               

               
Cow position:
               
chr25:7801172-7800866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 18
               

               
Conread position:
               
78-430
               

               
Cow position:
               
chr25:6891504-6891836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
267, 18
               

               
Conread position:
               
79-381
               

               
Cow position:
               
chr25:9023663-9023375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
80-381
               

               
Cow position:
               
chr25:2414844-2414564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
80-381
               

               
Cow position:
               
chr25:21121619-21121315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
80-381
               

               
Cow position:
               
chr25:27142898-27143201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
82-319
               

               
Cow position:
               
chr25:26269910-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
144, 14
               

               
Conread position:
               
83-381
               

               
Cow position:
               
chr25:13062887-13062587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
85-360
               

               
Cow position:
               
chr25:20211054-20211335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
86-381
               

               
Cow position:
               
chr25:9642381-9642086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
88-279
               

               
Cow position:
               
chr25:4860292-4860475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 10
               

               
Conread position:
               
88-386
               

               
Cow position:
               
chr25:35345055-35344763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 136
               

               
Conread position:
               
89-371
               

               
Cow position:
               
chr25:35340351-35340072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 98
               

               
Conread position:
               
89-384
               

               
Cow position:
               
chr25:5791778-5792079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
91-381
               

               
Cow position:
               
chr25:3689439-3689145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
91-381
               

               
Cow position:
               
chr25:15618725-15618431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
91-381
               

               
Cow position:
               
chr25:18090947-18090652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
91-381
               

               
Cow position:
               
chr25:19138543-19138837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
95-341
               

               
Cow position:
               
chr25:36033453-36033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
95-382
               

               
Cow position:
               
chr25:10330397-10330665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
96-386
               

               
Cow position:
               
chr25:18310817-18310526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
97-368
               

               
Cow position:
               
chr25:5755297-5755571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
97-378
               

               
Cow position:
               
chr25:38910553-38910269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
97-379
               

               
Cow position:
               
chr25:40388451-40388722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr25:14352315-14352028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr25:14555690-14555403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 49
               

               
Conread position:
               
97-381
               

               
Cow position:
               
chr25:29351907-29352194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
98-374
               

               
Cow position:
               
chr25:26058597-26058322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
98-378
               

               
Cow position:
               
chr25:11054916-11054661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr25:13840103-13840388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr25:35625172-35625444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
98-386
               

               
Cow position:
               
chr25:35333171-35332898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr25:448333-448600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
132, 156
               

               
Conread position:
               
99-368
               

               
Cow position:
               
chr25:16001514-16001778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 47
               

               
Conread position:
               
99-381
               

               
Cow position:
               
chr25:5515025-5514737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 253
               

               
Conread position:
               
100-357
               

               
Cow position:
               
chr25:9396455-9396205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
100-378
               

               
Cow position:
               
chr25:23389270-23389544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
101-365
               

               
Cow position:
               
chr25:34669253-34668990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
82, 23
               

               
Conread position:
               
102-381
               

               
Cow position:
               
chr25:6021976-6021700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
103-364
               

               
Cow position:
               
chr25:4002809-4002543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
103-368
               

               
Cow position:
               
chr25:8918269-8918535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
103-385
               

               
Cow position:
               
chr25:13642303-13642591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
106-350
               

               
Cow position:
               
chr25:7329553-7329305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
69, 85
               

               
Conread position:
               
106-381
               

               
Cow position:
               
chr25:34121080-34121358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 59
               

               
Conread position:
               
112-329
               

               
Cow position:
               
chr25:12899757-12899537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
113-371
               

               
Cow position:
               
chr25:15694979-15694723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
113-381
               

               
Cow position:
               
chr25:12750161-12750433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
113-388
               

               
Cow position:
               
chr25:15411771-15412047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
117-381
               

               
Cow position:
               
chr25:19531382-19531115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
117-382
               

               
Cow position:
               
chr25:3928039-3927771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
118-381
               

               
Cow position:
               
chr25:5571801-5572068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
119-381
               

               
Cow position:
               
chr25:5536652-5536918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
122-381
               

               
Cow position:
               
chr25:17659554-17659287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
123-381
               

               
Cow position:
               
chr25:8347498-8347239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 111
               

               
Conread position:
               
130-329
               

               
Cow position:
               
chr25:11978723-11978917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
130-381
               

               
Cow position:
               
chr25:16231143-16231397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr25:28863865-28863604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr25:10012067-10012329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
131-375
               

               
Cow position:
               
chr25:34163579-34163826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
131-376
               

               
Cow position:
               
chr25:13445937-13446185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
131-378
               

               
Cow position:
               
chr25:15391341-15391595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr25:29199307-29199063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
132-381
               

               
Cow position:
               
chr25:6966793-6967041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
133-367
               

               
Cow position:
               
chr25:34502693-34502930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
133-369
               

               
Cow position:
               
chr25:26352792-26353025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
133-371
               

               
Cow position:
               
chr25:8482329-8482573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
133-374
               

               
Cow position:
               
chr25:26757416-26757176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr25:7386727-7386478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:7446130-7445883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:11056847-11056605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:11097689-11097438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:12157864-12157613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:12943044-12943295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:17037437-17037186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:18155576-18155326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
64, 13
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:19912558-19912811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:20771352-20771603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:22198568-22198317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:23600957-23601208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:25873006-25873257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:26319727-26319476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:27077044-27076793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:27146423-27146167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:29524881-29525132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:32609433-32609684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:34257969-34257718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:34659125-34659374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:35590056-35589805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:35602413-35602162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:35649819-35649568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
133-381
               

               
Cow position:
               
chr25:36765322-36765565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr25:6606377-6606629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr25:19924502-19924252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
133-386
               

               
Cow position:
               
chr25:18453108-18452849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr25:18013380-18013124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
134-369
               

               
Cow position:
               
chr25:12054570-12054808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
134-378
               

               
Cow position:
               
chr25:13376134-13376381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr25:12234787-12235026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr25:2510728-2510978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr25:10895747-10895997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr25:17807797-17808047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
134-381
               

               
Cow position:
               
chr25:19586354-19586604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
134-391
               

               
Cow position:
               
chr25:37687201-37687439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
134-418
               

               
Cow position:
               
chr25:12824042-12824325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
135-368
               

               
Cow position:
               
chr25:24136461-24136692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
135-381
               

               
Cow position:
               
chr25:17419164-17418913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
135-381
               

               
Cow position:
               
chr25:29561936-29561694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
136-381
               

               
Cow position:
               
chr25:14954047-14954295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
137-379
               

               
Cow position:
               
chr25:10365778-10366018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
138-371
               

               
Cow position:
               
chr25:38972809-38972573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
138-381
               

               
Cow position:
               
chr25:16038861-16039109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 173
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr25:28274471-28274714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
31, 189
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr25:34501704-34501952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
138-382
               

               
Cow position:
               
chr25:39385854-39386102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
31, 81
               

               
Conread position:
               
138-388
               

               
Cow position:
               
chr25:35566904-35567163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
139-303
               

               
Cow position:
               
chr25:32453426-32453590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
139-310
               

               
Cow position:
               
chr25:12520987-12521160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
139-377
               

               
Cow position:
               
chr25:20060056-20060297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
139-381
               

               
Cow position:
               
chr25:31732761-31733006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
140-303
               

               
Cow position:
               
chr25:3983015-3982852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
143-381
               

               
Cow position:
               
chr25:25961930-25961692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr25:38358067-38357828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
103, 5
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr25:12360180-12359938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
144-381
               

               
Cow position:
               
chr25:16737970-16738215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 175
               

               
Conread position:
               
145-384
               

               
Cow position:
               
chr25:18206335-18206572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
146-370
               

               
Cow position:
               
chr25:6815208-6814992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
147-364
               

               
Cow position:
               
chr25:16400297-16400503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr25:18475147-18474910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
148-349
               

               
Cow position:
               
chr25:15286577-15286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
148-368
               

               
Cow position:
               
chr25:27594262-27594046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
149-378
               

               
Cow position:
               
chr25:27504214-27504452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
149-380
               

               
Cow position:
               
chr25:40151358-40151132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
150-296
               

               
Cow position:
               
chr25:23323167-23323017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
150-303
               

               
Cow position:
               
chr25:35110163-35110322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
150-345
               

               
Cow position:
               
chr25:6255974-6256172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
150-360
               

               
Cow position:
               
chr25:20085246-20085038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
150-368
               

               
Cow position:
               
chr25:19633663-19633874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
150-371
               

               
Cow position:
               
chr25:9961208-9961438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr25:6424625-6424855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
150-381
               

               
Cow position:
               
chr25:12204432-12204200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr25:33839341-33839117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
151-347
               

               
Cow position:
               
chr25:26112229-26112038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 106
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr25:36026970-36026753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
152-359
               

               
Cow position:
               
chr25:395313-395107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
152-366
               

               
Cow position:
               
chr25:10138051-10137843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
152-381
               

               
Cow position:
               
chr25:14224843-14225065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
156-371
               

               
Cow position:
               
chr25:41351249-41351465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 71
               

               
Conread position:
               
159-381
               

               
Cow position:
               
chr25:26618411-26618183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
163-375
               

               
Cow position:
               
chr25:16408777-16408996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 195
               

               
Conread position:
               
163-376
               

               
Cow position:
               
chr25:18448787-18448572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
165-368
               

               
Cow position:
               
chr25:1096520-1096320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
168-360
               

               
Cow position:
               
chr25:13303149-13302951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-364
               

               
Cow position:
               
chr25:27939865-27940058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 28
               

               
Conread position:
               
168-371
               

               
Cow position:
               
chr25:13315645-13315854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-371
               

               
Cow position:
               
chr25:15470119-15470328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-380
               

               
Cow position:
               
chr25:9596574-9596357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
26, 106
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:3141255-3141036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:6740760-6740550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:7609267-7609048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:8656242-8656025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:9415077-9414858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:9932023-9931804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:10637557-10637776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:11269254-11269468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:13955435-13955654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:13966715-13966934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:16068208-16067991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:19339761-19339543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:26756422-26756203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:29383378-29383597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:33589453-33589673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:33989715-33989934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:34618155-34618374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:36126950-36127169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
168-381
               

               
Cow position:
               
chr25:36554949-36554735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
168-383
               

               
Cow position:
               
chr25:21096576-21096793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
168-409
               

               
Cow position:
               
chr25:10746842-10746605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
169-381
               

               
Cow position:
               
chr25:12195384-12195595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
170-381
               

               
Cow position:
               
chr25:24726839-24727056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 207
               

               
Conread position:
               
170-381
               

               
Cow position:
               
chr25:26408143-26407929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
171-381
               

               
Cow position:
               
chr25:7717889-7717675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
171-381
               

               
Cow position:
               
chr25:23738508-23738724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
172-358
               

               
Cow position:
               
chr25:40658240-40658053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 140
               

               
Conread position:
               
172-381
               

               
Cow position:
               
chr25:25948458-25948665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr25:19576508-19576686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 12
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr25:2596122-2595922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
174-381
               

               
Cow position:
               
chr25:30816766-30816555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr25:17712473-17712261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
174-404
               

               
Cow position:
               
chr25:6003055-6003283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
174-404
               

               
Cow position:
               
chr25:35607786-35608010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
174-427
               

               
Cow position:
               
chr25:17354315-17354067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
175-382
               

               
Cow position:
               
chr25:18969211-18969001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
179-381
               

               
Cow position:
               
chr25:2111008-2110813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
179-381
               

               
Cow position:
               
chr25:18044566-18044770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr25:24167970-24168177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr25:24008244-24008423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
181-355
               

               
Cow position:
               
chr25:23324430-23324608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-363
               

               
Cow position:
               
chr25:33260667-33260488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
181-378
               

               
Cow position:
               
chr25:18491004-18490805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr25:7763181-7762977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr25:12752983-12753187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr25:13067048-13067252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-381
               

               
Cow position:
               
chr25:15412960-15412756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
181-393
               

               
Cow position:
               
chr25:21266939-21266724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
186-346
               

               
Cow position:
               
chr25:16316818-16316662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
188-381
               

               
Cow position:
               
chr25:23334940-23334742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
189-376
               

               
Cow position:
               
chr25:5271514-5271322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
194-330
               

               
Cow position:
               
chr25:22340954-22340820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
194-381
               

               
Cow position:
               
chr25:36120117-36119931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
195-374
               

               
Cow position:
               
chr25:10010803-10010984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
195-378
               

               
Cow position:
               
chr25:18934957-18935142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
196-381
               

               
Cow position:
               
chr25:18323434-18323623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
197-360
               

               
Cow position:
               
chr25:22971389-22971225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
203-390
               

               
Cow position:
               
chr25:10867239-10867426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
207-381
               

               
Cow position:
               
chr25:25783544-25783368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
208-377
               

               
Cow position:
               
chr25:11956732-11956561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr25:32848421-32848595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
210-383
               

               
Cow position:
               
chr25:6774896-6775071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
211-371
               

               
Cow position:
               
chr25:13566748-13566585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
211-383
               

               
Cow position:
               
chr25:15368579-15368406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
213-371
               

               
Cow position:
               
chr25:9842901-9842740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chr25:19366521-19366679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
214-379
               

               
Cow position:
               
chr25:14104181-14104026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
215-364
               

               
Cow position:
               
chr25:36557585-36557438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr25:3167279-3167449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr25:14191396-14191568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr25:24654274-24654439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr25:25866818-25866660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
217-378
               

               
Cow position:
               
chr25:12898659-12898493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
218-382
               

               
Cow position:
               
chr25:36871753-36871588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
220-377
               

               
Cow position:
               
chr25:10366803-10366952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr25:7069421-7069256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
220-388
               

               
Cow position:
               
chr25:17703746-17703913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
160, 43
               

               
Conread position:
               
221-339
               

               
Cow position:
               
chr25:35902131-35902011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr25:17427151-17426988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr25:17994400-17994562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
222-381
               

               
Cow position:
               
chr25:18073445-18073282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
223-378
               

               
Cow position:
               
chr25:7440738-7440588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
223-382
               

               
Cow position:
               
chr25:26910870-26911027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr25:16137042-16136886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr25:33112111-33112268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
224-381
               

               
Cow position:
               
chr25:36363447-36363292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
225-374
               

               
Cow position:
               
chr25:16039372-16039525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
227-360
               

               
Cow position:
               
chr25:31586925-31586791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
227-360
               

               
Cow position:
               
chr25:32176333-32176470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
227-371
               

               
Cow position:
               
chr25:25939495-25939640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
227-380
               

               
Cow position:
               
chr25:13720656-13720807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
227-381
               

               
Cow position:
               
chr25:9625696-9625537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
229-371
               

               
Cow position:
               
chr25:433202-433336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
229-378
               

               
Cow position:
               
chr25:4488610-4488465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 33
               

               
Conread position:
               
230-378
               

               
Cow position:
               
chr25:38569718-38569864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr25:17585048-17585204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr25:20434433-20434282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-381
               

               
Cow position:
               
chr25:32513958-32514112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
232-378
               

               
Cow position:
               
chr25:11051256-11051116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
233-371
               

               
Cow position:
               
chr25:12174624-12174765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
234-371
               

               
Cow position:
               
chr25:16691396-16691256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
238-386
               

               
Cow position:
               
chr25:11823654-11823800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 104
               

               
Conread position:
               
239-385
               

               
Cow position:
               
chr25:26456757-26456609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
242-376
               

               
Cow position:
               
chr25:22730503-22730377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
244-362
               

               
Cow position:
               
chr25:17475657-17475774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
246-371
               

               
Cow position:
               
chr25:14809176-14809050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
88, 51
               

               
Conread position:
               
248-378
               

               
Cow position:
               
chr25:3969257-3969129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
249-364
               

               
Cow position:
               
chr25:12997213-12997096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
249-391
               

               
Cow position:
               
chr25:33687034-33687175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
251-381
               

               
Cow position:
               
chr25:29336351-29336222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
252-381
               

               
Cow position:
               
chr25:26187673-26187801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
255-386
               

               
Cow position:
               
chr25:13443744-13443875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-381
               

               
Cow position:
               
chr25:22346497-22346373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
257-390
               

               
Cow position:
               
chr25:23919998-23920129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 116
               

               
Conread position:
               
260-381
               

               
Cow position:
               
chr25:4860594-4860715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
261-371
               

               
Cow position:
               
chr25:2517395-2517286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
263-390
               

               
Cow position:
               
chr25:37006836-37006963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
263-406
               

               
Cow position:
               
chr25:8961311-8961166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
275-371
               

               
Cow position:
               
chr25:36139442-36139346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
276-378
               

               
Cow position:
               
chr25:22549778-22549881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               
Show alignments to all cow chromosomes.