Cow genome map

Conread name: Ss1.1-Pig4-TMW8055G04.5

Conread position: 1-114
Cow position: chrX:32867012-32866900 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1-117
Cow position: chrX:4617261-4617376 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 1-135
Cow position: chrX:27668821-27668954 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 1-136
Cow position: chrX:4467104-4466970 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 1-144
Cow position: chrX:2936094-2935952 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-156
Cow position: chrX:12972821-12972666 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 94

Conread position: 1-166
Cow position: chrX:4615874-4616034 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 1-175
Cow position: chrX:28940382-28940212 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 97

Conread position: 1-181
Cow position: chrX:6599645-6599824 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 1-184
Cow position: chrX:40531906-40532087 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 1-186
Cow position: chrX:27306591-27306407 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 1-188
Cow position: chrX:22392848-22393035 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 177, 15

Conread position: 1-197
Cow position: chrX:16984777-16984574 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 28

Conread position: 1-200
Cow position: chrX:20957375-20957187 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 179, 94

Conread position: 1-204
Cow position: chrX:46429682-46429885 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 143, 93

Conread position: 1-208
Cow position: chrX:4152894-4153104 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 120, 93

Conread position: 1-212
Cow position: chrX:1088006-1088209 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 71

Conread position: 1-217
Cow position: chrX:4515828-4515606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 49

Conread position: 1-218
Cow position: chrX:22115180-22115396 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 179, 95

Conread position: 1-218
Cow position: chrX:23562769-23562556 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1-219
Cow position: chrX:36514755-36514974 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 96

Conread position: 1-219
Cow position: chrX:39220216-39220000 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 94

Conread position: 1-221
Cow position: chrX:5135383-5135607 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 11

Conread position: 1-229
Cow position: chrX:42855595-42855365 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 141, 95

Conread position: 1-230
Cow position: chrX:23113422-23113186 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 96

Conread position: 1-230
Cow position: chrX:29050385-29050156 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 77

Conread position: 1-231
Cow position: chrX:1466299-1466069 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 94

Conread position: 1-233
Cow position: chrX:47345466-47345240 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 96

Conread position: 1-252
Cow position: chrX:38728871-38728624 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 111

Conread position: 1-252
Cow position: chrX:42927687-42927932 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 95

Conread position: 1-252
Cow position: chrX:43115287-43115038 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 182, 82

Conread position: 1-263
Cow position: chrX:24331913-24331655 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 184, 94

Conread position: 1-269
Cow position: chrX:34315658-34315397 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 70, 96

Conread position: 1-271
Cow position: chrX:40685191-40685466 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 94

Conread position: 1-275
Cow position: chrX:18204326-18204602 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 98

Conread position: 1-277
Cow position: chrX:9365539-9365815 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 180, 95

Conread position: 1-280
Cow position: chrX:34314161-34313889 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 94

Conread position: 1-280
Cow position: chrX:41871204-41870933 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 150, 94

Conread position: 1-284
Cow position: chrX:34504912-34505195 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 60, 25

Conread position: 1-287
Cow position: chrX:48014572-48014295 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 180, 95

Conread position: 1-288
Cow position: chrX:5118361-5118654 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 148

Conread position: 1-289
Cow position: chrX:21986154-21986446 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 100

Conread position: 1-290
Cow position: chrX:45670359-45670078 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 95

Conread position: 1-292
Cow position: chrX:20584465-20584166 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 94

Conread position: 1-296
Cow position: chrX:35822475-35822184 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 20

Conread position: 1-297
Cow position: chrX:27228264-27227966 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 96

Conread position: 1-297
Cow position: chrX:31252544-31252257 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 180, 46

Conread position: 1-298
Cow position: chrX:36356242-36355957 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 164, 41

Conread position: 1-301
Cow position: chrX:8917531-8917231 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 26

Conread position: 1-303
Cow position: chrX:25207720-25208010 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 26

Conread position: 1-311
Cow position: chrX:4399256-4398954 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 151, 51

Conread position: 1-311
Cow position: chrX:34792176-34792482 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 8

Conread position: 1-312
Cow position: chrX:46433628-46433310 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 180, 94

Conread position: 1-313
Cow position: chrX:35885590-35885903 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 16, 29

Conread position: 1-315
Cow position: chrX:169409-169701 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 231, 88

Conread position: 1-315
Cow position: chrX:4278981-4279290 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 26

Conread position: 1-315
Cow position: chrX:27145741-27145447 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 95

Conread position: 1-321
Cow position: chrX:7336978-7336645 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 141, 274

Conread position: 1-322
Cow position: chrX:32821165-32820847 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 180, 91

Conread position: 1-325
Cow position: chrX:35382900-35383205 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 211, 58

Conread position: 1-327
Cow position: chrX:14955632-14955954 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 213
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 26

Conread position: 1-328
Cow position: chrX:42235387-42235722 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 94

Conread position: 1-329
Cow position: chrX:31312166-31311836 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 95

Conread position: 1-343
Cow position: chrX:29544740-29545083 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 26

Conread position: 1-346
Cow position: chrX:41192841-41192478 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 139, 95

Conread position: 1-347
Cow position: chrX:4825699-4826035 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 56

Conread position: 1-348
Cow position: chrX:45110793-45110447 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 84

Conread position: 1-349
Cow position: chrX:45846238-45845886 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 1-354
Cow position: chrX:34411983-34411625 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 94

Conread position: 1-355
Cow position: chrX:41790292-41790659 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 216

Conread position: 1-356
Cow position: chrX:40567758-40567383 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 92, 208

Conread position: 1-357
Cow position: chrX:29121184-29120841 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 1-357
Cow position: chrX:37780972-37781330 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 95

Conread position: 1-357
Cow position: chrX:37910581-37910235 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 15

Conread position: 1-358
Cow position: chrX:11633819-11633460 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 95

Conread position: 1-360
Cow position: chrX:1503464-1503119 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 0

Conread position: 1-360
Cow position: chrX:29601691-29602053 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 95

Conread position: 1-360
Cow position: chrX:46072680-46073042 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 95

Conread position: 1-364
Cow position: chrX:4043730-4044074 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 1-368
Cow position: chrX:3130709-3130353 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 1-368
Cow position: chrX:35543024-35542663 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 87

Conread position: 1-368
Cow position: chrX:42247045-42247412 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 95

Conread position: 1-368
Cow position: chrX:42380975-42381328 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 1-371
Cow position: chrX:5017285-5017639 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 36

Conread position: 1-371
Cow position: chrX:9201685-9201316 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 95

Conread position: 1-371
Cow position: chrX:12979697-12980060 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 95

Conread position: 1-371
Cow position: chrX:36976088-36975718 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 95

Conread position: 1-371
Cow position: chrX:38549584-38549217 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 128

Conread position: 1-371
Cow position: chrX:38642386-38642029 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 93

Conread position: 1-371
Cow position: chrX:41526392-41526752 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 51

Conread position: 1-376
Cow position: chrX:9252026-9252414 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 94

Conread position: 1-376
Cow position: chrX:20697472-20697844 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 95

Conread position: 1-376
Cow position: chrX:30543147-30543518 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 97

Conread position: 1-377
Cow position: chrX:6690123-6690485 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 95

Conread position: 1-377
Cow position: chrX:11656218-11655849 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 95

Conread position: 1-377
Cow position: chrX:11717646-11718017 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 95

Conread position: 1-377
Cow position: chrX:41123196-41122835 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 90

Conread position: 1-377
Cow position: chrX:41674242-41673865 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 88

Conread position: 1-378
Cow position: chrX:6414178-6413808 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 64

Conread position: 1-378
Cow position: chrX:13647648-13648022 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 95

Conread position: 1-378
Cow position: chrX:15147060-15147424 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 164, 83

Conread position: 1-378
Cow position: chrX:26493143-26492764 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 26

Conread position: 1-378
Cow position: chrX:28865869-28866230 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 82

Conread position: 1-378
Cow position: chrX:34554862-34554492 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 99

Conread position: 1-378
Cow position: chrX:42469804-42470175 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 182

Conread position: 1-378
Cow position: chrX:45968285-45967924 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 344, 95

Conread position: 1-379
Cow position: chrX:878243-878610 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 94

Conread position: 1-379
Cow position: chrX:11073054-11073430 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 95

Conread position: 1-380
Cow position: chrX:126904-126552 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 86

Conread position: 1-380
Cow position: chrX:13177339-13177709 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 95

Conread position: 1-380
Cow position: chrX:17888286-17888646 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 187, 82

Conread position: 1-380
Cow position: chrX:22074937-22074560 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 1-380
Cow position: chrX:33466761-33466377 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 86, 102

Conread position: 1-381
Cow position: chrX:5872454-5872072 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 95

Conread position: 1-381
Cow position: chrX:10411847-10412227 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 99

Conread position: 1-381
Cow position: chrX:12290856-12290495 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 157, 95

Conread position: 1-381
Cow position: chrX:12309249-12309630 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 95

Conread position: 1-381
Cow position: chrX:14973609-14973973 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 266
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 174, 89

Conread position: 1-381
Cow position: chrX:15546019-15545656 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 231, 95

Conread position: 1-381
Cow position: chrX:24365686-24366070 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 150, 40

Conread position: 1-381
Cow position: chrX:27442402-27442796 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 332

Conread position: 1-381
Cow position: chrX:27446823-27446447 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 95

Conread position: 1-381
Cow position: chrX:27705723-27705352 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 260
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 180, 95

Conread position: 1-381
Cow position: chrX:29289715-29289335 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 1-381
Cow position: chrX:31373673-31373333 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 1-381
Cow position: chrX:31442692-31443062 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 95

Conread position: 1-381
Cow position: chrX:31489657-31489271 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 151, 95

Conread position: 1-381
Cow position: chrX:34377079-34376716 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 93

Conread position: 1-381
Cow position: chrX:34402143-34401756 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 1-381
Cow position: chrX:34565420-34565056 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 15

Conread position: 1-381
Cow position: chrX:38006634-38007009 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 18

Conread position: 1-381
Cow position: chrX:38964245-38963868 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 95

Conread position: 1-381
Cow position: chrX:41238218-41238604 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 180, 77

Conread position: 1-381
Cow position: chrX:45502283-45501907 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 95

Conread position: 1-382
Cow position: chrX:30133182-30133566 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 138, 25

Conread position: 1-382
Cow position: chrX:31250525-31250150 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 1-383
Cow position: chrX:3154104-3154489 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 9, 48

Conread position: 1-383
Cow position: chrX:17726113-17725737 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 96

Conread position: 1-384
Cow position: chrX:28013305-28013684 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 16, 26

Conread position: 1-384
Cow position: chrX:30420815-30421184 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 274
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 248, 96

Conread position: 1-386
Cow position: chrX:15815223-15814850 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 97

Conread position: 1-386
Cow position: chrX:21672697-21672305 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 1-386
Cow position: chrX:27393889-27394260 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 1-386
Cow position: chrX:28878037-28878409 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 230, 95

Conread position: 1-386
Cow position: chrX:37119729-37119353 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 151, 11

Conread position: 1-386
Cow position: chrX:44961888-44961501 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 186, 95

Conread position: 1-387
Cow position: chrX:27771831-27772203 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 1-388
Cow position: chrX:24424264-24424635 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 1-388
Cow position: chrX:32420349-32419962 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 24

Conread position: 1-390
Cow position: chrX:33493913-33493525 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 72

Conread position: 1-390
Cow position: chrX:40035303-40035695 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 102

Conread position: 1-392
Cow position: chrX:17795118-17794733 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 95

Conread position: 1-410
Cow position: chrX:34503057-34502652 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 95

Conread position: 1-418
Cow position: chrX:33640112-33639698 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 95

Conread position: 1-431
Cow position: chrX:14599669-14599246 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 18

Conread position: 1-437
Cow position: chrX:33855083-33855528 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 2-371
Cow position: chrX:32623706-32623352 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 17

Conread position: 2-381
Cow position: chrX:16762910-16762530 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 97

Conread position: 2-383
Cow position: chrX:39558213-39558591 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 50

Conread position: 2-386
Cow position: chrX:43568055-43567693 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 261
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 179, 94

Conread position: 2-390
Cow position: chrX:1514283-1514654 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 227, 71

Conread position: 3-126
Cow position: chrX:20340508-20340629 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 3-181
Cow position: chrX:2523547-2523718 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 3-220
Cow position: chrX:18272924-18273139 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 154, 9

Conread position: 3-253
Cow position: chrX:33539305-33539051 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 177, 92

Conread position: 3-267
Cow position: chrX:19273572-19273854 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 124, 93

Conread position: 3-277
Cow position: chrX:7710404-7710680 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 172, 92

Conread position: 3-328
Cow position: chrX:7162191-7161883 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 149, 74

Conread position: 3-368
Cow position: chrX:47481931-47481571 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 169, 70

Conread position: 3-377
Cow position: chrX:4768867-4768513 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 167, 75

Conread position: 3-377
Cow position: chrX:17964387-17964759 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 181, 93

Conread position: 3-378
Cow position: chrX:35224430-35224064 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 13

Conread position: 3-379
Cow position: chrX:8925834-8925464 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 3-380
Cow position: chrX:37232542-37232169 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 93

Conread position: 3-381
Cow position: chrX:4996722-4996370 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 95

Conread position: 3-381
Cow position: chrX:6544389-6544015 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 70

Conread position: 3-381
Cow position: chrX:18694795-18695162 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 71

Conread position: 3-381
Cow position: chrX:31436609-31436239 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 92

Conread position: 3-381
Cow position: chrX:44054937-44054561 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 179, 93

Conread position: 3-383
Cow position: chrX:14883820-14884205 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 94

Conread position: 4-252
Cow position: chrX:26881431-26881681 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 92

Conread position: 4-275
Cow position: chrX:616125-616401 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 92

Conread position: 4-277
Cow position: chrX:30337824-30338080 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 176, 58

Conread position: 4-308
Cow position: chrX:14275609-14275904 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 119, 92

Conread position: 4-332
Cow position: chrX:10252066-10252374 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 69

Conread position: 4-360
Cow position: chrX:23092005-23091661 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 93

Conread position: 4-361
Cow position: chrX:48236951-48236590 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 48

Conread position: 4-363
Cow position: chrX:6265465-6265809 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 149, 70

Conread position: 4-364
Cow position: chrX:13191425-13191768 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 260, 76

Conread position: 4-377
Cow position: chrX:40557545-40557913 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 92

Conread position: 4-377
Cow position: chrX:42171163-42171536 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 6

Conread position: 4-380
Cow position: chrX:37072523-37072166 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 92

Conread position: 4-381
Cow position: chrX:7695882-7695520 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 8

Conread position: 4-381
Cow position: chrX:22482557-22482930 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 69

Conread position: 4-381
Cow position: chrX:40269626-40269235 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 93

Conread position: 4-381
Cow position: chrX:45429888-45430259 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 92

Conread position: 4-382
Cow position: chrX:9635057-9635423 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 74

Conread position: 4-383
Cow position: chrX:11082488-11082856 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 4-386
Cow position: chrX:618875-619254 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 36

Conread position: 4-386
Cow position: chrX:22624610-22624235 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 144, 92

Conread position: 4-386
Cow position: chrX:47248644-47249034 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 268
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 77

Conread position: 5-181
Cow position: chrX:11325965-11326140 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 122, 27

Conread position: 5-230
Cow position: chrX:918583-918818 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 60

Conread position: 5-248
Cow position: chrX:29230132-29229901 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 176, 91

Conread position: 5-269
Cow position: chrX:37986358-37986100 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 132, 54

Conread position: 5-329
Cow position: chrX:36068148-36067830 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 94

Conread position: 5-348
Cow position: chrX:38853330-38852988 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 68

Conread position: 5-378
Cow position: chrX:11938801-11939162 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 11

Conread position: 5-386
Cow position: chrX:41884279-41884664 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 91

Conread position: 5-392
Cow position: chrX:5919629-5919222 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 283
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 95

Conread position: 6-180
Cow position: chrX:45382914-45383096 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 67

Conread position: 6-181
Cow position: chrX:12082192-12082365 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 72

Conread position: 6-192
Cow position: chrX:35985949-35985765 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 20

Conread position: 6-250
Cow position: chrX:31515306-31515058 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 91

Conread position: 6-279
Cow position: chrX:11614825-11614556 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 171, 58

Conread position: 6-280
Cow position: chrX:11084932-11085201 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 222, 46

Conread position: 6-342
Cow position: chrX:7278043-7277717 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 260, 92

Conread position: 6-343
Cow position: chrX:43730092-43730418 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 6-346
Cow position: chrX:46587954-46587611 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 90

Conread position: 6-371
Cow position: chrX:45174982-45174613 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 92

Conread position: 6-378
Cow position: chrX:27431786-27432157 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 93

Conread position: 6-378
Cow position: chrX:38218848-38218477 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 6-379
Cow position: chrX:35288787-35288421 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 87

Conread position: 6-381
Cow position: chrX:20151988-20151609 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 150, 77

Conread position: 6-381
Cow position: chrX:25035250-25035628 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 90

Conread position: 6-390
Cow position: chrX:6563651-6563262 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 21

Conread position: 6-390
Cow position: chrX:25338319-25337930 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 6-392
Cow position: chrX:630178-630559 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 21

Conread position: 7-181
Cow position: chrX:19394684-19394512 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 7-238
Cow position: chrX:10516383-10516157 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 128, 22

Conread position: 7-241
Cow position: chrX:46291275-46291036 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 12

Conread position: 7-251
Cow position: chrX:34836933-34837167 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 238, 87

Conread position: 7-283
Cow position: chrX:38066324-38066597 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 248, 92

Conread position: 7-361
Cow position: chrX:37574971-37574635 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 7-364
Cow position: chrX:17042813-17042466 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 20

Conread position: 7-366
Cow position: chrX:44397140-44396789 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 173, 45

Conread position: 7-371
Cow position: chrX:5900593-5900226 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 250
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 174, 76

Conread position: 7-379
Cow position: chrX:917237-917608 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 89

Conread position: 7-381
Cow position: chrX:20339763-20340132 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 34

Conread position: 7-381
Cow position: chrX:25713926-25713560 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 18

Conread position: 7-381
Cow position: chrX:35273495-35273103 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 59

Conread position: 7-381
Cow position: chrX:38094389-38094766 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 71

Conread position: 7-383
Cow position: chrX:35413741-35413389 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 168, 76

Conread position: 7-386
Cow position: chrX:17662467-17662843 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 8-380
Cow position: chrX:755093-754720 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 10-385
Cow position: chrX:30922298-30921941 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 171, 10

Conread position: 11-316
Cow position: chrX:47165760-47166061 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 13

Conread position: 11-325
Cow position: chrX:47484138-47484457 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 170, 13

Conread position: 11-381
Cow position: chrX:15597153-15596797 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 216, 13

Conread position: 11-381
Cow position: chrX:32020008-32020363 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 170, 13

Conread position: 12-179
Cow position: chrX:29585245-29585082 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 12-212
Cow position: chrX:19469380-19469573 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 12-342
Cow position: chrX:8869276-8869614 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 84

Conread position: 12-381
Cow position: chrX:9650898-9651286 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 84

Conread position: 12-381
Cow position: chrX:34532646-34532290 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 87

Conread position: 13-379
Cow position: chrX:13686857-13686476 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 215
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 13

Conread position: 13-381
Cow position: chrX:14463442-14463072 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 237
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 13

Conread position: 14-378
Cow position: chrX:21064406-21064048 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 10

Conread position: 14-379
Cow position: chrX:4632732-4633090 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 84

Conread position: 14-381
Cow position: chrX:16734683-16734316 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 12

Conread position: 16-271
Cow position: chrX:45977048-45976785 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 129, 79

Conread position: 16-503
Cow position: chrX:18425817-18426305 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 178, 10

Conread position: 17-381
Cow position: chrX:35533976-35533610 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 9

Conread position: 18-325
Cow position: chrX:47362503-47362797 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 126, 74

Conread position: 19-360
Cow position: chrX:3580063-3579716 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 163, 77

Conread position: 19-363
Cow position: chrX:10302459-10302116 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 7

Conread position: 19-373
Cow position: chrX:22822165-22821814 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 108, 77

Conread position: 19-381
Cow position: chrX:45414185-45414541 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 79

Conread position: 19-386
Cow position: chrX:16283825-16284193 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 259
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 34, 7

Conread position: 20-381
Cow position: chrX:9572646-9572282 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 49

Conread position: 20-381
Cow position: chrX:9976559-9976195 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 49

Conread position: 23-381
Cow position: chrX:16703789-16703429 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 18

Conread position: 25-315
Cow position: chrX:18485916-18485619 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 126

Conread position: 25-349
Cow position: chrX:47046401-47046729 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 203, 55

Conread position: 25-355
Cow position: chrX:27480513-27480843 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 71

Conread position: 25-366
Cow position: chrX:47054412-47054754 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 58

Conread position: 25-371
Cow position: chrX:36198089-36197736 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 114

Conread position: 25-375
Cow position: chrX:38071658-38072006 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 145, 32

Conread position: 25-376
Cow position: chrX:47210724-47211086 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 25-381
Cow position: chrX:625947-626286 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 22

Conread position: 25-381
Cow position: chrX:4268951-4269309 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 67

Conread position: 25-381
Cow position: chrX:10865762-10866108 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 158, 68

Conread position: 25-381
Cow position: chrX:14222188-14221842 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 9

Conread position: 25-381
Cow position: chrX:16783604-16783253 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 69

Conread position: 25-381
Cow position: chrX:34754063-34754433 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 96

Conread position: 25-381
Cow position: chrX:41878821-41879172 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 52

Conread position: 25-381
Cow position: chrX:46770849-46771213 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 233
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 72

Conread position: 25-391
Cow position: chrX:16289448-16289813 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 75

Conread position: 26-273
Cow position: chrX:5679460-5679700 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 196, 44

Conread position: 26-277
Cow position: chrX:21566519-21566261 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 112, 71

Conread position: 26-289
Cow position: chrX:29680149-29680409 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 26-329
Cow position: chrX:23785758-23785464 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 206, 26

Conread position: 26-338
Cow position: chrX:47300791-47301102 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 69

Conread position: 26-360
Cow position: chrX:10959283-10959623 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 70

Conread position: 26-366
Cow position: chrX:7722100-7721758 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 47

Conread position: 26-366
Cow position: chrX:15007037-15007377 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 149, 70

Conread position: 26-371
Cow position: chrX:7572017-7571675 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 26-371
Cow position: chrX:32431736-32431396 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 69

Conread position: 26-376
Cow position: chrX:47967719-47967363 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 70

Conread position: 26-378
Cow position: chrX:44736888-44737229 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 155, 73

Conread position: 26-378
Cow position: chrX:44834684-44835054 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 252
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 90

Conread position: 26-381
Cow position: chrX:8797361-8797007 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 57

Conread position: 26-381
Cow position: chrX:19690327-19689977 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 70

Conread position: 26-381
Cow position: chrX:28602801-28603155 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 73

Conread position: 26-381
Cow position: chrX:35268973-35268649 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 253
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 26-381
Cow position: chrX:45403713-45404075 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 26-381
Cow position: chrX:46722622-46722982 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 26-381
Cow position: chrX:48194923-48195282 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 70

Conread position: 26-383
Cow position: chrX:48652609-48652970 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 158, 70

Conread position: 26-386
Cow position: chrX:21004796-21004438 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 72

Conread position: 26-386
Cow position: chrX:23513905-23514264 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 58

Conread position: 26-386
Cow position: chrX:34543896-34543541 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 70

Conread position: 26-386
Cow position: chrX:42492411-42492756 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 73

Conread position: 26-388
Cow position: chrX:1615931-1616293 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 58

Conread position: 26-390
Cow position: chrX:7509251-7508891 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 39

Conread position: 26-390
Cow position: chrX:9416572-9416943 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 70

Conread position: 26-390
Cow position: chrX:21625837-21626203 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 42

Conread position: 26-390
Cow position: chrX:28111621-28111256 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 27

Conread position: 26-390
Cow position: chrX:38936812-38936452 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 62

Conread position: 26-418
Cow position: chrX:46532383-46532787 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 70

Conread position: 27-315
Cow position: chrX:23340859-23341143 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 204, 54

Conread position: 27-371
Cow position: chrX:19841548-19841889 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 19, 40

Conread position: 27-371
Cow position: chrX:26751494-26751848 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 61, 110

Conread position: 27-371
Cow position: chrX:31449508-31449853 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 220
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 72

Conread position: 27-378
Cow position: chrX:3648702-3649047 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 76

Conread position: 27-378
Cow position: chrX:27498883-27498530 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 167, 78

Conread position: 27-378
Cow position: chrX:34762182-34761828 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 72

Conread position: 27-381
Cow position: chrX:7445199-7444843 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 227
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 40

Conread position: 27-381
Cow position: chrX:38102335-38102685 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 58

Conread position: 27-382
Cow position: chrX:15037633-15037985 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 72

Conread position: 27-386
Cow position: chrX:39071804-39071451 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 167, 18

Conread position: 28-346
Cow position: chrX:16996602-16996300 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 201, 68

Conread position: 28-363
Cow position: chrX:16541547-16541899 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 99, 68

Conread position: 28-374
Cow position: chrX:48010714-48010360 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 68

Conread position: 28-377
Cow position: chrX:31948825-31949168 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 68

Conread position: 28-377
Cow position: chrX:47873226-47873578 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 67

Conread position: 28-379
Cow position: chrX:488614-488249 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 269

Conread position: 28-381
Cow position: chrX:13868812-13868453 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 147, 67

Conread position: 28-381
Cow position: chrX:13913185-13912838 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 68

Conread position: 28-381
Cow position: chrX:15485524-15485869 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 80

Conread position: 28-381
Cow position: chrX:23563681-23564038 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 68

Conread position: 28-381
Cow position: chrX:40183244-40183591 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 68

Conread position: 28-382
Cow position: chrX:1055271-1055630 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 68

Conread position: 28-382
Cow position: chrX:22813172-22812820 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 153, 68

Conread position: 28-390
Cow position: chrX:21663404-21663061 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 144, 68

Conread position: 29-352
Cow position: chrX:27175107-27174782 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 54

Conread position: 29-368
Cow position: chrX:26625562-26625905 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 67

Conread position: 29-371
Cow position: chrX:6278389-6278737 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 29-371
Cow position: chrX:36283449-36283114 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 154, 67

Conread position: 29-374
Cow position: chrX:30962768-30963106 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 67

Conread position: 29-375
Cow position: chrX:31260505-31260865 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 70

Conread position: 29-377
Cow position: chrX:20887532-20887881 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 67

Conread position: 29-381
Cow position: chrX:161521-161187 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 67, 0

Conread position: 29-381
Cow position: chrX:8731202-8730838 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 49

Conread position: 29-381
Cow position: chrX:9161684-9161347 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 18

Conread position: 29-381
Cow position: chrX:27508915-27509261 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 33

Conread position: 29-381
Cow position: chrX:32170780-32171123 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 44

Conread position: 29-381
Cow position: chrX:34441345-34441691 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 67

Conread position: 29-382
Cow position: chrX:25815792-25816138 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 67

Conread position: 29-383
Cow position: chrX:20801878-20801534 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 114, 67

Conread position: 29-388
Cow position: chrX:17630692-17631048 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 69

Conread position: 29-390
Cow position: chrX:15305187-15305538 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 18

Conread position: 29-390
Cow position: chrX:27680507-27680153 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 67

Conread position: 33-341
Cow position: chrX:1499770-1499468 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 200, 63

Conread position: 33-378
Cow position: chrX:45598500-45598842 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 143, 67

Conread position: 33-381
Cow position: chrX:7646356-7646017 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 63

Conread position: 36-241
Cow position: chrX:16348469-16348672 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 33

Conread position: 36-306
Cow position: chrX:6407645-6407382 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 117, 29

Conread position: 36-317
Cow position: chrX:47186222-47186498 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 179, 58

Conread position: 36-343
Cow position: chrX:31340812-31340501 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 117, 11

Conread position: 36-366
Cow position: chrX:13382426-13382098 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 32

Conread position: 36-367
Cow position: chrX:7425567-7425237 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 10

Conread position: 36-367
Cow position: chrX:29032512-29032190 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 11

Conread position: 36-368
Cow position: chrX:35926058-35925739 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 151, 11

Conread position: 36-368
Cow position: chrX:37489821-37489502 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 196, 60

Conread position: 36-370
Cow position: chrX:21642380-21642708 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 145, 58

Conread position: 36-371
Cow position: chrX:12249918-12249574 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 186

Conread position: 36-371
Cow position: chrX:18456503-18456161 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 10

Conread position: 36-371
Cow position: chrX:25570892-25571227 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 11

Conread position: 36-375
Cow position: chrX:27514960-27514633 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 193, 60

Conread position: 36-380
Cow position: chrX:2301026-2300693 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 11

Conread position: 36-380
Cow position: chrX:28134440-28134106 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 145, 16

Conread position: 36-380
Cow position: chrX:34454759-34454429 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 136, 63

Conread position: 36-381
Cow position: chrX:7351399-7351058 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 36-381
Cow position: chrX:7497344-7497004 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 114, 11

Conread position: 36-381
Cow position: chrX:20377072-20376726 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 114, 11

Conread position: 36-381
Cow position: chrX:38227007-38227331 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 136, 37

Conread position: 36-381
Cow position: chrX:47361788-47362127 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 223
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 63

Conread position: 36-382
Cow position: chrX:15329744-15329411 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 147, 11

Conread position: 36-384
Cow position: chrX:12826852-12826505 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 11

Conread position: 36-386
Cow position: chrX:2029487-2029144 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 51, 11

Conread position: 36-386
Cow position: chrX:28787451-28787120 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 236
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 147, 11

Conread position: 36-386
Cow position: chrX:38935381-38935035 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 52

Conread position: 36-388
Cow position: chrX:45089548-45089195 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 238
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 58

Conread position: 37-248
Cow position: chrX:17949391-17949599 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 59

Conread position: 37-340
Cow position: chrX:43779746-43780053 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 144, 59

Conread position: 37-367
Cow position: chrX:11856531-11856202 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 59

Conread position: 37-368
Cow position: chrX:36840964-36840645 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 169, 46

Conread position: 37-378
Cow position: chrX:3654708-3654366 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 144, 5

Conread position: 37-381
Cow position: chrX:33802907-33803254 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 17

Conread position: 37-381
Cow position: chrX:37836679-37836345 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 29

Conread position: 38-366
Cow position: chrX:4865333-4865025 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 53

Conread position: 38-369
Cow position: chrX:27994148-27994486 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 58

Conread position: 38-380
Cow position: chrX:11313685-11314018 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 112, 28

Conread position: 38-381
Cow position: chrX:9041144-9041469 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 38-382
Cow position: chrX:21063324-21062974 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 110

Conread position: 38-382
Cow position: chrX:27176213-27176562 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 81, 9

Conread position: 38-386
Cow position: chrX:6203641-6203309 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 227
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 215, 58

Conread position: 39-379
Cow position: chrX:39545880-39546212 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 45

Conread position: 39-383
Cow position: chrX:24259480-24259821 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 30, 59

Conread position: 39-388
Cow position: chrX:47145184-47144840 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 57

Conread position: 40-381
Cow position: chrX:32743632-32743297 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 239
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 111, 43

Conread position: 41-377
Cow position: chrX:45113716-45113391 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 97

Conread position: 41-381
Cow position: chrX:17542058-17541723 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 41-381
Cow position: chrX:26440688-26441021 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 43

Conread position: 42-179
Cow position: chrX:44095356-44095220 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 55

Conread position: 42-276
Cow position: chrX:27685345-27685107 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 55

Conread position: 42-318
Cow position: chrX:36061256-36060973 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 54

Conread position: 42-347
Cow position: chrX:10831391-10831704 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 23, 57

Conread position: 42-381
Cow position: chrX:151997-151660 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 41

Conread position: 42-381
Cow position: chrX:23583657-23583317 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 54

Conread position: 42-381
Cow position: chrX:43527604-43527262 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 56

Conread position: 42-381
Cow position: chrX:44192348-44192684 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 57

Conread position: 42-381
Cow position: chrX:46032631-46032959 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 54

Conread position: 42-383
Cow position: chrX:40480776-40481114 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 32

Conread position: 42-386
Cow position: chrX:24132055-24132397 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 141, 7

Conread position: 43-363
Cow position: chrX:6488671-6488363 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 25

Conread position: 44-381
Cow position: chrX:15577543-15577882 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 22

Conread position: 44-381
Cow position: chrX:27516615-27516291 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 132, 48

Conread position: 45-306
Cow position: chrX:22921414-22921147 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 50

Conread position: 45-315
Cow position: chrX:30134079-30134348 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 51

Conread position: 45-324
Cow position: chrX:40809786-40809502 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 51

Conread position: 45-342
Cow position: chrX:1175890-1176185 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 207, 14

Conread position: 45-349
Cow position: chrX:32330259-32329951 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 43

Conread position: 45-351
Cow position: chrX:842250-841947 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 51

Conread position: 45-356
Cow position: chrX:25568297-25568615 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 53

Conread position: 45-360
Cow position: chrX:41271563-41271879 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 25, 36

Conread position: 45-362
Cow position: chrX:33000998-33000679 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 45-364
Cow position: chrX:18650948-18651266 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 53

Conread position: 45-368
Cow position: chrX:21686711-21686386 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 210
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 23

Conread position: 45-371
Cow position: chrX:2467977-2467648 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 51

Conread position: 45-371
Cow position: chrX:12458797-12458467 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 23

Conread position: 45-371
Cow position: chrX:17231828-17231503 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 45-375
Cow position: chrX:27096216-27095884 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 94

Conread position: 45-378
Cow position: chrX:9360980-9360645 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 51

Conread position: 45-378
Cow position: chrX:21416196-21415850 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 225
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 43

Conread position: 45-378
Cow position: chrX:21833982-21833647 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 57

Conread position: 45-378
Cow position: chrX:40826658-40826985 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 136, 51

Conread position: 45-379
Cow position: chrX:6493829-6493491 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 51

Conread position: 45-381
Cow position: chrX:1576166-1576504 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 21

Conread position: 45-381
Cow position: chrX:2425025-2425363 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:2933816-2933481 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 138, 53

Conread position: 45-381
Cow position: chrX:4904894-4905230 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 232
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 84

Conread position: 45-381
Cow position: chrX:5288060-5288398 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 23

Conread position: 45-381
Cow position: chrX:5376467-5376128 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:6655170-6655508 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 54

Conread position: 45-381
Cow position: chrX:11844148-11844482 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 81, 51

Conread position: 45-381
Cow position: chrX:14163301-14162950 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 102

Conread position: 45-381
Cow position: chrX:14407355-14407691 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 51

Conread position: 45-381
Cow position: chrX:16721713-16722043 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 37

Conread position: 45-381
Cow position: chrX:16853288-16853630 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:18195008-18194672 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 108, 51

Conread position: 45-381
Cow position: chrX:18245079-18244748 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 218
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 149, 53

Conread position: 45-381
Cow position: chrX:21593374-21593042 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 24

Conread position: 45-381
Cow position: chrX:21768900-21768563 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 21

Conread position: 45-381
Cow position: chrX:21785867-21785526 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 58

Conread position: 45-381
Cow position: chrX:22494104-22493766 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:22537851-22538195 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:23300051-23299713 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 186, 53

Conread position: 45-381
Cow position: chrX:27106352-27106017 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 53

Conread position: 45-381
Cow position: chrX:27976734-27977070 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:29778140-29777800 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 21

Conread position: 45-381
Cow position: chrX:30179842-30180167 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:30530931-30531273 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 23

Conread position: 45-381
Cow position: chrX:31202937-31202599 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 58

Conread position: 45-381
Cow position: chrX:32094353-32094691 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 57

Conread position: 45-381
Cow position: chrX:35258638-35258969 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 78, 53

Conread position: 45-381
Cow position: chrX:37843810-37843479 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 14

Conread position: 45-381
Cow position: chrX:40648743-40648422 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 45-381
Cow position: chrX:41103887-41103547 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 87

Conread position: 45-381
Cow position: chrX:42460278-42459939 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 21

Conread position: 45-381
Cow position: chrX:46578758-46579096 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 23

Conread position: 45-381
Cow position: chrX:47344389-47344053 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 51

Conread position: 45-382
Cow position: chrX:23122488-23122142 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 107, 49

Conread position: 45-383
Cow position: chrX:18897558-18897892 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 108, 53

Conread position: 45-383
Cow position: chrX:40544511-40544851 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 51, 57

Conread position: 45-390
Cow position: chrX:45449001-45448637 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 45-392
Cow position: chrX:34238812-34238470 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 107, 51

Conread position: 46-366
Cow position: chrX:3147294-3146970 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 212
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 96, 47

Conread position: 46-378
Cow position: chrX:18118376-18118710 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 52

Conread position: 46-379
Cow position: chrX:27594086-27594421 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 136, 55

Conread position: 46-381
Cow position: chrX:2944772-2945109 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 151, 52

Conread position: 46-381
Cow position: chrX:22821510-22821173 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 36

Conread position: 46-381
Cow position: chrX:23264341-23264678 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 109, 52

Conread position: 46-381
Cow position: chrX:27997742-27997409 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 22

Conread position: 46-382
Cow position: chrX:20320672-20321009 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 52

Conread position: 46-382
Cow position: chrX:34662754-34663081 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 135, 49

Conread position: 47-350
Cow position: chrX:15576639-15576334 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 55

Conread position: 47-381
Cow position: chrX:157686-158010 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 21

Conread position: 48-288
Cow position: chrX:12405291-12405539 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 105, 48

Conread position: 48-306
Cow position: chrX:10129098-10128838 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 48

Conread position: 48-351
Cow position: chrX:29542127-29542430 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 48

Conread position: 48-373
Cow position: chrX:30222217-30221893 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 209
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 19

Conread position: 48-381
Cow position: chrX:7053646-7053977 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 184, 27

Conread position: 48-381
Cow position: chrX:16714286-16713956 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 109, 50

Conread position: 48-381
Cow position: chrX:19290852-19290531 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 53

Conread position: 48-381
Cow position: chrX:20945655-20945327 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 90

Conread position: 48-381
Cow position: chrX:37415982-37416316 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 60, 40

Conread position: 49-365
Cow position: chrX:34995415-34995098 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 134, 116

Conread position: 49-368
Cow position: chrX:29508870-29508549 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 19

Conread position: 49-371
Cow position: chrX:16358922-16359246 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 17

Conread position: 49-381
Cow position: chrX:2812319-2812653 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 213
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 19

Conread position: 49-381
Cow position: chrX:4621861-4622195 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 19

Conread position: 49-381
Cow position: chrX:14598938-14598604 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 15

Conread position: 49-381
Cow position: chrX:16712047-16711713 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 73

Conread position: 49-381
Cow position: chrX:17995552-17995218 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 17

Conread position: 49-381
Cow position: chrX:27306019-27305685 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 19

Conread position: 49-381
Cow position: chrX:30981072-30981406 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 19

Conread position: 49-387
Cow position: chrX:19930737-19930408 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 109, 16

Conread position: 49-392
Cow position: chrX:14800725-14801069 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 106, 49

Conread position: 50-381
Cow position: chrX:2665101-2664768 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:7486956-7486623 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 210
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:12466585-12466254 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 93

Conread position: 50-381
Cow position: chrX:13195879-13196212 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 215
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 18

Conread position: 50-381
Cow position: chrX:16286301-16285968 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 15

Conread position: 50-381
Cow position: chrX:18461884-18462216 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 18

Conread position: 50-381
Cow position: chrX:19022217-19022550 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 18

Conread position: 50-381
Cow position: chrX:20021655-20021322 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:22521007-22521340 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 147, 48

Conread position: 50-381
Cow position: chrX:22816033-22815700 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 46

Conread position: 50-381
Cow position: chrX:22857130-22856791 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:23024797-23024463 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 82

Conread position: 50-381
Cow position: chrX:25288587-25288920 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:30197389-30197056 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 16

Conread position: 50-381
Cow position: chrX:38015186-38014853 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 18

Conread position: 50-392
Cow position: chrX:30752866-30752522 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 225
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 16

Conread position: 51-381
Cow position: chrX:26709698-26709363 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 15

Conread position: 52-381
Cow position: chrX:5288597-5288928 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 16

Conread position: 52-381
Cow position: chrX:24105710-24105385 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 174, 48

Conread position: 53-368
Cow position: chrX:13265542-13265848 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 53-376
Cow position: chrX:5638084-5638405 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 43

Conread position: 53-381
Cow position: chrX:42507563-42507888 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 224
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 129, 43

Conread position: 54-376
Cow position: chrX:48800622-48800301 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 99

Conread position: 55-387
Cow position: chrX:41744000-41743665 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 86

Conread position: 56-381
Cow position: chrX:678473-678809 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 40

Conread position: 57-376
Cow position: chrX:11589507-11589828 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 39

Conread position: 59-252
Cow position: chrX:19003372-19003187 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 59-350
Cow position: chrX:15575618-15575325 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 66

Conread position: 59-367
Cow position: chrX:16416588-16416281 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 122, 37

Conread position: 59-381
Cow position: chrX:39174140-39174454 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 172, 39

Conread position: 60-386
Cow position: chrX:46045123-46044798 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 171, 39

Conread position: 62-376
Cow position: chrX:28632409-28632716 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 34

Conread position: 64-381
Cow position: chrX:12018366-12018034 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 118, 32

Conread position: 64-386
Cow position: chrX:9855370-9855054 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 170, 16

Conread position: 64-386
Cow position: chrX:9954211-9953895 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 168, 16

Conread position: 65-334
Cow position: chrX:37541191-37540930 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 31

Conread position: 65-349
Cow position: chrX:6234376-6234658 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 86

Conread position: 65-404
Cow position: chrX:13785287-13785632 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 31

Conread position: 68-387
Cow position: chrX:26875811-26876128 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 28

Conread position: 69-393
Cow position: chrX:7361796-7362105 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 24

Conread position: 70-350
Cow position: chrX:29876009-29876277 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 70-357
Cow position: chrX:2186322-2186041 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 76, 29

Conread position: 70-381
Cow position: chrX:1810092-1810402 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 70, 28

Conread position: 72-381
Cow position: chrX:20743056-20742745 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 206
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 110, 26

Conread position: 72-381
Cow position: chrX:34270469-34270172 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 9

Conread position: 73-280
Cow position: chrX:32215267-32215053 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 75

Conread position: 73-330
Cow position: chrX:48035490-48035238 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 23

Conread position: 73-349
Cow position: chrX:9425678-9425951 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 23

Conread position: 73-381
Cow position: chrX:27704183-27704494 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 109, 91

Conread position: 73-381
Cow position: chrX:30163065-30162756 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 70, 23

Conread position: 74-255
Cow position: chrX:38654366-38654546 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 22

Conread position: 74-319
Cow position: chrX:48044135-48044379 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 176, 24

Conread position: 74-365
Cow position: chrX:20710138-20709846 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 181, 22

Conread position: 74-377
Cow position: chrX:40116484-40116188 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 34

Conread position: 74-379
Cow position: chrX:34192734-34192439 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 74-383
Cow position: chrX:6674855-6675166 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 22

Conread position: 75-379
Cow position: chrX:25232656-25232351 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 75-381
Cow position: chrX:11664245-11663937 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 23

Conread position: 75-381
Cow position: chrX:24968749-24969057 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 156, 23

Conread position: 77-314
Cow position: chrX:46146500-46146735 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 19

Conread position: 77-332
Cow position: chrX:36961702-36961443 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 98, 19

Conread position: 77-365
Cow position: chrX:20791754-20792043 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 16

Conread position: 78-378
Cow position: chrX:41166902-41167202 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 78-381
Cow position: chrX:7718909-7718612 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 18

Conread position: 80-377
Cow position: chrX:21891728-21892026 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 18

Conread position: 80-381
Cow position: chrX:8434145-8434448 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 18

Conread position: 80-381
Cow position: chrX:8641849-8641547 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 18

Conread position: 80-381
Cow position: chrX:9129118-9128815 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 196
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 18

Conread position: 80-381
Cow position: chrX:12851194-12850891 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 18

Conread position: 80-381
Cow position: chrX:14781283-14781586 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 16

Conread position: 80-381
Cow position: chrX:19473098-19473402 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 18

Conread position: 80-381
Cow position: chrX:30171648-30171951 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 18

Conread position: 80-381
Cow position: chrX:43767475-43767778 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 18

Conread position: 80-386
Cow position: chrX:23970438-23970143 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 8

Conread position: 81-364
Cow position: chrX:10437607-10437889 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 71, 65

Conread position: 81-371
Cow position: chrX:8070642-8070931 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 15

Conread position: 82-377
Cow position: chrX:42875039-42874741 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 83-381
Cow position: chrX:5423007-5423307 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 193
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 148, 15

Conread position: 83-381
Cow position: chrX:5598919-5599219 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 114, 15

Conread position: 83-381
Cow position: chrX:6195695-6195995 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 99, 15

Conread position: 83-381
Cow position: chrX:10293103-10293403 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 197
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 15

Conread position: 83-381
Cow position: chrX:15094425-15094125 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 15

Conread position: 83-381
Cow position: chrX:22915525-22915225 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 15

Conread position: 83-381
Cow position: chrX:27403887-27404187 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 15

Conread position: 84-381
Cow position: chrX:28845887-28845605 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 12

Conread position: 85-360
Cow position: chrX:42461689-42461966 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 85-381
Cow position: chrX:40648041-40647737 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 56

Conread position: 86-381
Cow position: chrX:8900079-8899783 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 10

Conread position: 86-394
Cow position: chrX:41199158-41198851 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 166, 14

Conread position: 87-351
Cow position: chrX:20752304-20752048 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 96, 20

Conread position: 88-381
Cow position: chrX:15139495-15139786 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 53

Conread position: 90-378
Cow position: chrX:42585030-42585307 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 160, 11

Conread position: 91-345
Cow position: chrX:39938474-39938728 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 5, 59

Conread position: 91-363
Cow position: chrX:238825-239101 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 49

Conread position: 91-367
Cow position: chrX:35681391-35681118 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 60

Conread position: 91-376
Cow position: chrX:10306722-10306434 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 64, 9

Conread position: 91-381
Cow position: chrX:7312046-7311752 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 197
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 7, 44

Conread position: 91-381
Cow position: chrX:23702712-23703006 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:23827642-23827348 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:27324732-27325026 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:28105967-28105681 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 64

Conread position: 91-381
Cow position: chrX:36240448-36240154 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:39731566-39731272 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:44168256-44168550 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 75

Conread position: 91-381
Cow position: chrX:48328334-48328628 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 75

Conread position: 92-368
Cow position: chrX:11746893-11746614 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 95, 42

Conread position: 94-381
Cow position: chrX:37497398-37497688 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 70

Conread position: 95-356
Cow position: chrX:41560213-41560455 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 95-365
Cow position: chrX:4750258-4750523 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 95-381
Cow position: chrX:1781954-1781664 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 69

Conread position: 95-381
Cow position: chrX:10496281-10495992 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 87, 69

Conread position: 95-381
Cow position: chrX:17498129-17497855 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 161, 0

Conread position: 95-381
Cow position: chrX:28157542-28157244 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 212
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 16

Conread position: 95-381
Cow position: chrX:34991080-34990800 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 156

Conread position: 95-389
Cow position: chrX:40789256-40788956 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 136

Conread position: 96-353
Cow position: chrX:26940461-26940705 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 96-381
Cow position: chrX:19015480-19015201 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 84

Conread position: 97-381
Cow position: chrX:1749463-1749750 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:1975552-1975838 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:2362545-2362258 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:2417438-2417725 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:3078542-3078828 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 67

Conread position: 97-381
Cow position: chrX:3157664-3157377 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 67

Conread position: 97-381
Cow position: chrX:9018257-9018544 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 186
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 134, 53

Conread position: 97-381
Cow position: chrX:11860196-11860483 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:12033017-12032730 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:15781627-15781340 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:18451045-18451320 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:19774434-19774721 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:22557547-22557260 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:24904130-24903843 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:29844430-29844717 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 134, 67

Conread position: 97-381
Cow position: chrX:36479978-36479691 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:37772387-37772675 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:38443008-38442721 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 193
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 67

Conread position: 97-381
Cow position: chrX:39667147-39667434 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 53

Conread position: 97-381
Cow position: chrX:41413738-41414025 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 134, 67

Conread position: 97-382
Cow position: chrX:32127950-32128222 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 165, 41

Conread position: 98-349
Cow position: chrX:28835861-28836110 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 113

Conread position: 98-371
Cow position: chrX:14900689-14900952 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 98-372
Cow position: chrX:15997204-15996922 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 48

Conread position: 98-378
Cow position: chrX:42994654-42994376 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 98-389
Cow position: chrX:30862357-30862055 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 173

Conread position: 99-381
Cow position: chrX:25238219-25237937 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 73

Conread position: 101-347
Cow position: chrX:26286019-26285772 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 114

Conread position: 101-395
Cow position: chrX:44053298-44053004 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 44

Conread position: 101-404
Cow position: chrX:1978552-1978242 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 99

Conread position: 102-377
Cow position: chrX:38439518-38439236 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 103-355
Cow position: chrX:10123317-10123562 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 39

Conread position: 103-380
Cow position: chrX:9997298-9997573 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 38

Conread position: 103-381
Cow position: chrX:14925038-14924759 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 58

Conread position: 104-343
Cow position: chrX:17908253-17908487 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 180
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 71, 38

Conread position: 104-381
Cow position: chrX:18025081-18024798 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 106-390
Cow position: chrX:2383518-2383237 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 30

Conread position: 111-381
Cow position: chrX:48371119-48370855 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 38

Conread position: 113-378
Cow position: chrX:10096058-10095788 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 110

Conread position: 116-378
Cow position: chrX:46381754-46382014 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 68

Conread position: 116-381
Cow position: chrX:23497644-23497904 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 116-385
Cow position: chrX:47232855-47232591 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 31

Conread position: 117-365
Cow position: chrX:29509417-29509669 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 151

Conread position: 117-381
Cow position: chrX:16807730-16807996 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 64

Conread position: 117-381
Cow position: chrX:20583044-20582789 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 23

Conread position: 117-381
Cow position: chrX:39520429-39520696 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 114, 47

Conread position: 117-386
Cow position: chrX:1104778-1105050 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 29

Conread position: 120-390
Cow position: chrX:30832826-30833088 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 138

Conread position: 122-381
Cow position: chrX:7550775-7551036 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 37

Conread position: 123-373
Cow position: chrX:44870621-44870863 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 19

Conread position: 123-381
Cow position: chrX:13396233-13396493 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 27

Conread position: 123-381
Cow position: chrX:30823536-30823274 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 36

Conread position: 123-381
Cow position: chrX:34175178-34175439 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 60, 42

Conread position: 123-381
Cow position: chrX:46606493-46606751 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 42

Conread position: 124-381
Cow position: chrX:3388124-3387865 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 9

Conread position: 124-381
Cow position: chrX:17605543-17605802 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 9

Conread position: 125-377
Cow position: chrX:45399476-45399735 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 15

Conread position: 126-378
Cow position: chrX:45933021-45932766 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 39

Conread position: 128-382
Cow position: chrX:25419147-25419403 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 53, 23

Conread position: 129-365
Cow position: chrX:41083938-41083700 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 80

Conread position: 129-381
Cow position: chrX:11358049-11358306 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 19

Conread position: 130-377
Cow position: chrX:2648345-2648587 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 25

Conread position: 130-381
Cow position: chrX:18077891-18078151 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 130-381
Cow position: chrX:29169321-29169575 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 16

Conread position: 131-378
Cow position: chrX:776776-777032 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 15

Conread position: 131-381
Cow position: chrX:25458622-25458878 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 14

Conread position: 131-390
Cow position: chrX:40474858-40475113 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 34

Conread position: 132-365
Cow position: chrX:46315371-46315604 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 18

Conread position: 132-371
Cow position: chrX:17271274-17271520 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 132-381
Cow position: chrX:44850664-44850917 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 14

Conread position: 132-384
Cow position: chrX:1331946-1331690 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 33

Conread position: 133-315
Cow position: chrX:22866565-22866756 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 133-338
Cow position: chrX:8991891-8991689 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 50, 11

Conread position: 133-357
Cow position: chrX:12485125-12485354 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 15

Conread position: 133-371
Cow position: chrX:43984183-43983940 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 29

Conread position: 133-371
Cow position: chrX:47538841-47538600 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-376
Cow position: chrX:30689351-30689105 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 6

Conread position: 133-377
Cow position: chrX:17783509-17783262 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 13

Conread position: 133-378
Cow position: chrX:10444404-10444652 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 31

Conread position: 133-378
Cow position: chrX:36196108-36195854 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 133-378
Cow position: chrX:39559642-39559890 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 13

Conread position: 133-378
Cow position: chrX:44096562-44096315 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 13

Conread position: 133-378
Cow position: chrX:47608424-47608176 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:1946706-1946962 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 32

Conread position: 133-381
Cow position: chrX:3653767-3653522 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 78

Conread position: 133-381
Cow position: chrX:3658044-3658295 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:5300902-5300651 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 32

Conread position: 133-381
Cow position: chrX:5646094-5646345 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:7510146-7509896 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 31

Conread position: 133-381
Cow position: chrX:7755911-7755660 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:10922561-10922812 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:12001137-12001388 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:14134485-14134234 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:15505301-15505050 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 64, 31

Conread position: 133-381
Cow position: chrX:15589865-15590113 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 32

Conread position: 133-381
Cow position: chrX:16478912-16478661 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 32

Conread position: 133-381
Cow position: chrX:19109031-19109282 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 32

Conread position: 133-381
Cow position: chrX:19333159-19333410 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:19494950-19495201 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:20031824-20032072 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 40

Conread position: 133-381
Cow position: chrX:20099332-20099081 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:22608582-22608833 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:23109767-23109518 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 31

Conread position: 133-381
Cow position: chrX:23140319-23140069 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 68, 31

Conread position: 133-381
Cow position: chrX:23235840-23235589 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:23571787-23572041 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 133-381
Cow position: chrX:24757687-24757938 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 32

Conread position: 133-381
Cow position: chrX:24967279-24967028 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:25945825-25946078 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 7

Conread position: 133-381
Cow position: chrX:28555425-28555676 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:30198982-30199233 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 49, 32

Conread position: 133-381
Cow position: chrX:30538142-30538393 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:30899377-30899628 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:31605694-31605443 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:33764354-33764103 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 31

Conread position: 133-381
Cow position: chrX:33983596-33983847 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:34095571-34095320 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:34285053-34285304 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 35

Conread position: 133-381
Cow position: chrX:34333190-34333441 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:34413786-34413535 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 32

Conread position: 133-381
Cow position: chrX:35042234-35041978 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 8

Conread position: 133-381
Cow position: chrX:35498096-35497845 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:35609998-35609745 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 147

Conread position: 133-381
Cow position: chrX:36820222-36820473 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:37060781-37061032 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:38230257-38230508 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:41488156-41488406 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 31

Conread position: 133-381
Cow position: chrX:42166085-42165834 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 13

Conread position: 133-381
Cow position: chrX:42591737-42591484 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 13

Conread position: 133-381
Cow position: chrX:42779116-42779367 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 13

Conread position: 133-381
Cow position: chrX:48165533-48165282 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 32

Conread position: 133-381
Cow position: chrX:48204911-48205154 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 31

Conread position: 133-390
Cow position: chrX:30729404-30729654 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 56

Conread position: 133-410
Cow position: chrX:8591555-8591269 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 13

Conread position: 134-363
Cow position: chrX:24450166-24450398 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 30

Conread position: 134-367
Cow position: chrX:45674856-45674617 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 62

Conread position: 134-380
Cow position: chrX:13322990-13323240 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 49, 83

Conread position: 134-381
Cow position: chrX:361444-361694 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 30

Conread position: 134-381
Cow position: chrX:13448279-13448029 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 30

Conread position: 134-381
Cow position: chrX:15008425-15008673 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 30

Conread position: 134-381
Cow position: chrX:18293928-18293691 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 134-381
Cow position: chrX:24509876-24509626 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 30

Conread position: 134-381
Cow position: chrX:28057786-28058036 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 30

Conread position: 134-381
Cow position: chrX:30245048-30245296 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 16

Conread position: 134-381
Cow position: chrX:32038834-32039084 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 30

Conread position: 134-381
Cow position: chrX:35803825-35803573 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 14

Conread position: 135-379
Cow position: chrX:45939446-45939683 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 11

Conread position: 135-381
Cow position: chrX:24577555-24577806 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 13

Conread position: 135-381
Cow position: chrX:27469646-27469895 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 29

Conread position: 135-381
Cow position: chrX:37958505-37958256 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 29

Conread position: 135-388
Cow position: chrX:9226973-9227226 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 13

Conread position: 135-390
Cow position: chrX:28580232-28579971 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 23

Conread position: 136-377
Cow position: chrX:10351872-10351624 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 137-368
Cow position: chrX:16789848-16790065 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 70

Conread position: 138-366
Cow position: chrX:28098115-28097899 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 57

Conread position: 138-371
Cow position: chrX:39701228-39700996 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 58

Conread position: 138-378
Cow position: chrX:24587443-24587692 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-380
Cow position: chrX:45412654-45412895 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 74

Conread position: 138-381
Cow position: chrX:18949734-18949986 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 68

Conread position: 138-381
Cow position: chrX:23281014-23280765 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 168
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 138-381
Cow position: chrX:23451158-23451412 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 138-381
Cow position: chrX:26531971-26531717 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 138-381
Cow position: chrX:30143274-30143526 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 138-381
Cow position: chrX:30228102-30228352 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 138-381
Cow position: chrX:35240872-35240623 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 138-381
Cow position: chrX:41157322-41157070 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 175

Conread position: 138-381
Cow position: chrX:47041982-47042232 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 184

Conread position: 138-386
Cow position: chrX:8681921-8682176 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 87

Conread position: 139-322
Cow position: chrX:45759395-45759215 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 114

Conread position: 139-382
Cow position: chrX:42338943-42339178 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 13, 41

Conread position: 140-381
Cow position: chrX:14819721-14819471 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 27

Conread position: 141-296
Cow position: chrX:48385356-48385520 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 141-306
Cow position: chrX:14003640-14003811 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 141-368
Cow position: chrX:4482968-4482734 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 132

Conread position: 141-371
Cow position: chrX:160035-160264 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 36

Conread position: 141-418
Cow position: chrX:33827020-33827299 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 10

Conread position: 142-378
Cow position: chrX:42589759-42589996 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 21, 46

Conread position: 142-381
Cow position: chrX:5809196-5808951 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 41

Conread position: 142-386
Cow position: chrX:41403978-41403729 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 225

Conread position: 142-386
Cow position: chrX:41410526-41410277 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 225

Conread position: 142-390
Cow position: chrX:38840888-38840637 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 88

Conread position: 144-309
Cow position: chrX:18515403-18515232 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 167

Conread position: 144-368
Cow position: chrX:13405311-13405544 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 144-381
Cow position: chrX:1550951-1550709 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 20

Conread position: 144-381
Cow position: chrX:2964049-2963809 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 30

Conread position: 144-381
Cow position: chrX:20877758-20878004 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 144-381
Cow position: chrX:24318062-24317825 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 170

Conread position: 144-381
Cow position: chrX:30454617-30454863 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 144-381
Cow position: chrX:38051434-38051673 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 18

Conread position: 144-409
Cow position: chrX:40540144-40540413 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 202

Conread position: 145-360
Cow position: chrX:16689494-16689272 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 145-378
Cow position: chrX:35387906-35388145 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 145-381
Cow position: chrX:2478624-2478868 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 231

Conread position: 146-349
Cow position: chrX:47454125-47453917 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 146-381
Cow position: chrX:32583810-32584054 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 146-390
Cow position: chrX:47756932-47757181 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 51

Conread position: 147-382
Cow position: chrX:24234478-24234720 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 148-379
Cow position: chrX:42086850-42086623 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 47

Conread position: 148-381
Cow position: chrX:11806020-11806258 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 148-381
Cow position: chrX:28846889-28847120 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 10

Conread position: 148-381
Cow position: chrX:29066438-29066200 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 112

Conread position: 148-385
Cow position: chrX:281116-280886 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 24

Conread position: 148-386
Cow position: chrX:8558469-8558709 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 67

Conread position: 148-386
Cow position: chrX:11562150-11561907 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 22, 194

Conread position: 148-390
Cow position: chrX:8517862-8517626 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 61

Conread position: 148-391
Cow position: chrX:11675056-11674813 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 49

Conread position: 148-404
Cow position: chrX:11982130-11981867 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 35, 85

Conread position: 148-418
Cow position: chrX:43075980-43075715 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 59

Conread position: 149-367
Cow position: chrX:13245587-13245364 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 165

Conread position: 149-379
Cow position: chrX:43647755-43647983 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 60

Conread position: 149-381
Cow position: chrX:19188930-19188695 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 150-330
Cow position: chrX:1505700-1505522 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 106

Conread position: 150-368
Cow position: chrX:12116037-12115810 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 150-368
Cow position: chrX:19019114-19019338 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 220

Conread position: 150-368
Cow position: chrX:37048586-37048809 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 79

Conread position: 150-378
Cow position: chrX:42587437-42587667 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 19

Conread position: 150-381
Cow position: chrX:21665603-21665834 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 102

Conread position: 150-382
Cow position: chrX:42282419-42282194 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 74

Conread position: 150-386
Cow position: chrX:35284611-35284371 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 107

Conread position: 152-382
Cow position: chrX:25848901-25848677 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 31, 43

Conread position: 154-390
Cow position: chrX:2147332-2147082 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 155-386
Cow position: chrX:7541947-7541713 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 67

Conread position: 156-325
Cow position: chrX:31256851-31256682 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 100

Conread position: 157-368
Cow position: chrX:7513494-7513288 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 17

Conread position: 158-350
Cow position: chrX:44063737-44063927 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 39

Conread position: 158-381
Cow position: chrX:33020467-33020245 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 23, 71

Conread position: 159-371
Cow position: chrX:45566618-45566399 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 22, 37

Conread position: 159-381
Cow position: chrX:26974897-26974669 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 160-360
Cow position: chrX:24201168-24200972 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 117

Conread position: 161-378
Cow position: chrX:36693216-36692997 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 43

Conread position: 161-380
Cow position: chrX:17744045-17743821 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 11

Conread position: 161-381
Cow position: chrX:35409633-35409427 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 11

Conread position: 161-381
Cow position: chrX:38967628-38967409 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 124

Conread position: 163-356
Cow position: chrX:45015555-45015369 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 100

Conread position: 163-368
Cow position: chrX:12974143-12974352 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 163-386
Cow position: chrX:2206574-2206790 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 82

Conread position: 165-366
Cow position: chrX:4942780-4942976 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 165-378
Cow position: chrX:27590060-27590278 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 165-381
Cow position: chrX:16706783-16706561 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 165-389
Cow position: chrX:877054-877276 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 28

Conread position: 167-381
Cow position: chrX:828866-828650 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 74

Conread position: 167-381
Cow position: chrX:8530519-8530299 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 167-381
Cow position: chrX:37816567-37816347 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 168-330
Cow position: chrX:24149614-24149449 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 117

Conread position: 168-356
Cow position: chrX:46429887-46430075 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 183, 91

Conread position: 168-360
Cow position: chrX:13029680-13029880 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 168-368
Cow position: chrX:5274228-5274024 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 183

Conread position: 168-371
Cow position: chrX:29859000-29859208 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-371
Cow position: chrX:35612567-35612776 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 168-377
Cow position: chrX:3417162-3417376 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-377
Cow position: chrX:30159033-30159248 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-378
Cow position: chrX:4343727-4343511 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 168-378
Cow position: chrX:10428517-10428301 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 168-378
Cow position: chrX:10932650-10932434 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 168-378
Cow position: chrX:12146072-12145856 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 168-378
Cow position: chrX:47318384-47318168 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 50

Conread position: 168-381
Cow position: chrX:2274895-2274676 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:2499365-2499581 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 110

Conread position: 168-381
Cow position: chrX:2580377-2580158 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:3464100-3464317 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 143

Conread position: 168-381
Cow position: chrX:3894998-3895217 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:4404510-4404294 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 54

Conread position: 168-381
Cow position: chrX:4869521-4869302 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:5123383-5123602 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:5306577-5306358 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 168-381
Cow position: chrX:5319738-5319959 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 168-381
Cow position: chrX:5333843-5334061 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 183

Conread position: 168-381
Cow position: chrX:5739235-5739454 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:5867123-5866905 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 132

Conread position: 168-381
Cow position: chrX:6567052-6566833 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:8782722-8782503 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:9085355-9085574 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 168-381
Cow position: chrX:9168636-9168855 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:11498647-11498866 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:12776009-12776227 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:13971249-13971468 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 155

Conread position: 168-381
Cow position: chrX:14121774-14121993 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 168-381
Cow position: chrX:14846096-14846315 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:16279627-16279408 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:16466279-16466059 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:17055547-17055328 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 168-381
Cow position: chrX:18655827-18656046 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:19196540-19196759 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 23

Conread position: 168-381
Cow position: chrX:20579773-20579993 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 150

Conread position: 168-381
Cow position: chrX:20616819-20617038 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:21011343-21011563 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:22078305-22078086 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:22772633-22772414 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:22888637-22888417 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:23216085-23215866 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:25276521-25276740 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:25741136-25741355 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 168-381
Cow position: chrX:26276117-26275898 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:26759591-26759810 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:27422304-27422522 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 183

Conread position: 168-381
Cow position: chrX:27759685-27759466 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:27761320-27761099 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 168-381
Cow position: chrX:28769641-28769864 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 168-381
Cow position: chrX:29084098-29083881 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 181

Conread position: 168-381
Cow position: chrX:29356565-29356346 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:30686615-30686837 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:30816291-30816510 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:30822562-30822343 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:31977868-31978087 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 168-381
Cow position: chrX:32011009-32010790 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:42121281-42121062 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:43979598-43979377 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:44387963-44387744 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 168-381
Cow position: chrX:44558057-44557838 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:44980059-44980278 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 168-381
Cow position: chrX:45237444-45237225 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:45263091-45263309 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 134

Conread position: 168-381
Cow position: chrX:45904156-45903937 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 168-381
Cow position: chrX:46424776-46424993 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 174

Conread position: 168-382
Cow position: chrX:2160743-2160523 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 168-383
Cow position: chrX:45424847-45425066 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 208

Conread position: 168-388
Cow position: chrX:11725285-11725509 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 215

Conread position: 168-391
Cow position: chrX:16835450-16835226 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 9

Conread position: 168-407
Cow position: chrX:15438675-15438917 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 194

Conread position: 168-410
Cow position: chrX:6869584-6869834 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 169-369
Cow position: chrX:36922616-36922418 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 13

Conread position: 169-378
Cow position: chrX:47053957-47054177 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 170-381
Cow position: chrX:671033-671250 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 170-381
Cow position: chrX:31813913-31814130 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 164

Conread position: 170-381
Cow position: chrX:39714525-39714308 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 170-386
Cow position: chrX:46984522-46984748 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 171-382
Cow position: chrX:27751265-27751477 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 48

Conread position: 172-379
Cow position: chrX:44731565-44731355 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 172-382
Cow position: chrX:14409413-14409629 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 29

Conread position: 172-390
Cow position: chrX:2786589-2786793 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 37

Conread position: 174-365
Cow position: chrX:43049314-43049117 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 174-381
Cow position: chrX:24125103-24125312 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 33

Conread position: 174-381
Cow position: chrX:29226446-29226235 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 174-381
Cow position: chrX:36778377-36778165 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 51, 0

Conread position: 174-381
Cow position: chrX:40452244-40452454 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 74, 0

Conread position: 174-383
Cow position: chrX:7806345-7806136 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 19

Conread position: 174-391
Cow position: chrX:25411806-25411591 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 68

Conread position: 175-381
Cow position: chrX:4123802-4123594 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 72

Conread position: 176-378
Cow position: chrX:45694065-45693868 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 176-381
Cow position: chrX:21256002-21255796 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 31, 18

Conread position: 177-381
Cow position: chrX:35937118-35937313 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 180-367
Cow position: chrX:48684266-48684450 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 75

Conread position: 180-381
Cow position: chrX:11581904-11581693 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 180-381
Cow position: chrX:44087269-44087063 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 181-345
Cow position: chrX:29770215-29770384 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 181-364
Cow position: chrX:16324006-16324187 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 51, 95

Conread position: 181-378
Cow position: chrX:13385370-13385169 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 181-378
Cow position: chrX:30021135-30021336 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 181-379
Cow position: chrX:22524566-22524768 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 181-381
Cow position: chrX:2559001-2559203 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 157

Conread position: 181-381
Cow position: chrX:15346006-15346210 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 181-381
Cow position: chrX:15531192-15531396 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 181-381
Cow position: chrX:18223375-18223172 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 168

Conread position: 181-381
Cow position: chrX:23047741-23047539 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 91

Conread position: 181-381
Cow position: chrX:27627318-27627114 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 181-383
Cow position: chrX:15259656-15259860 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 193

Conread position: 181-390
Cow position: chrX:48227650-48227862 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 24, 87

Conread position: 182-381
Cow position: chrX:47385970-47386173 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 182-386
Cow position: chrX:44908274-44908076 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 184-381
Cow position: chrX:28517765-28517965 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 173

Conread position: 187-381
Cow position: chrX:23061398-23061213 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 187-387
Cow position: chrX:6640082-6639877 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 86

Conread position: 187-390
Cow position: chrX:26883182-26883385 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 19

Conread position: 189-364
Cow position: chrX:34385284-34385105 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 189-368
Cow position: chrX:20653351-20653167 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 39

Conread position: 189-378
Cow position: chrX:42855365-42855170 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 0

Conread position: 189-381
Cow position: chrX:36249911-36250103 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 66

Conread position: 189-384
Cow position: chrX:1728472-1728661 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 190-381
Cow position: chrX:32978308-32978497 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 55, 20

Conread position: 191-386
Cow position: chrX:47243329-47243525 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 33

Conread position: 194-357
Cow position: chrX:25036750-25036918 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 194-365
Cow position: chrX:31745097-31745272 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 42

Conread position: 194-368
Cow position: chrX:42499079-42499257 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 196-368
Cow position: chrX:18812196-18812030 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 21

Conread position: 196-381
Cow position: chrX:15090819-15091008 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 196-381
Cow position: chrX:38151637-38151447 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 199-382
Cow position: chrX:31556554-31556740 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 32, 9

Conread position: 200-410
Cow position: chrX:39549275-39549059 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 204-367
Cow position: chrX:48536727-48536892 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 133

Conread position: 207-381
Cow position: chrX:22811822-22811645 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 24, 149

Conread position: 209-377
Cow position: chrX:29907296-29907467 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 6

Conread position: 215-381
Cow position: chrX:9154289-9154119 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 215-381
Cow position: chrX:21795420-21795255 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 24

Conread position: 215-381
Cow position: chrX:30966030-30965860 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 216-371
Cow position: chrX:48676000-48675846 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 216-379
Cow position: chrX:37299523-37299357 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 129

Conread position: 216-381
Cow position: chrX:3161090-3161257 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 48

Conread position: 216-381
Cow position: chrX:31473450-31473281 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 216-383
Cow position: chrX:46989867-46990027 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 46

Conread position: 216-387
Cow position: chrX:10107050-10107222 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 77

Conread position: 216-418
Cow position: chrX:6607346-6607142 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 132

Conread position: 217-378
Cow position: chrX:33205072-33205230 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 66

Conread position: 217-381
Cow position: chrX:10916671-10916513 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 218-381
Cow position: chrX:5893154-5892987 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 218-381
Cow position: chrX:29877255-29877422 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 220-381
Cow position: chrX:5507596-5507434 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 5

Conread position: 222-378
Cow position: chrX:43511341-43511181 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:5112634-5112797 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:11566836-11566673 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:12360811-12360648 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:17980517-17980354 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:23452676-23452839 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 222-381
Cow position: chrX:29760621-29760458 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 222-382
Cow position: chrX:24173246-24173411 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 223-378
Cow position: chrX:2523809-2523968 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 223-381
Cow position: chrX:14152296-14152456 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 223-381
Cow position: chrX:30863278-30863440 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 223-382
Cow position: chrX:29049880-29049728 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 224-371
Cow position: chrX:9538477-9538327 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 90

Conread position: 224-381
Cow position: chrX:26619446-26619604 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 54

Conread position: 224-386
Cow position: chrX:9838057-9837894 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 151

Conread position: 225-374
Cow position: chrX:41050033-41049881 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 25, 89

Conread position: 225-381
Cow position: chrX:10415613-10415767 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 225-382
Cow position: chrX:12852592-12852751 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 123

Conread position: 225-384
Cow position: chrX:9404033-9403873 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 9

Conread position: 225-389
Cow position: chrX:11448153-11448317 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 137

Conread position: 225-390
Cow position: chrX:1524510-1524674 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 10

Conread position: 225-390
Cow position: chrX:42955392-42955227 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 136

Conread position: 227-366
Cow position: chrX:13058495-13058354 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 227-368
Cow position: chrX:45787563-45787426 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 227-375
Cow position: chrX:6514371-6514522 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 227-378
Cow position: chrX:45043474-45043320 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 132

Conread position: 227-379
Cow position: chrX:25283238-25283385 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 227-379
Cow position: chrX:25301839-25301992 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 49

Conread position: 227-380
Cow position: chrX:30919476-30919632 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 227-381
Cow position: chrX:6659291-6659132 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 87

Conread position: 227-381
Cow position: chrX:7382235-7382082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 227-381
Cow position: chrX:16531909-16531758 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 41

Conread position: 227-381
Cow position: chrX:24735854-24735697 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 227-381
Cow position: chrX:37377350-37377509 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 227-381
Cow position: chrX:39346870-39347027 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 122

Conread position: 227-381
Cow position: chrX:42500403-42500253 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 227-383
Cow position: chrX:8492842-8493002 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 227-388
Cow position: chrX:25617996-25618160 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 227-389
Cow position: chrX:31338892-31338727 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 227-389
Cow position: chrX:33713622-33713790 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 227-390
Cow position: chrX:25163731-25163561 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 50

Conread position: 227-390
Cow position: chrX:25205634-25205468 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 227-390
Cow position: chrX:36154660-36154822 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 36

Conread position: 227-390
Cow position: chrX:46447916-46448076 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 227-392
Cow position: chrX:22873314-22873146 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 228-366
Cow position: chrX:40364878-40365018 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 99

Conread position: 229-386
Cow position: chrX:20168117-20167958 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 230-381
Cow position: chrX:45959147-45959301 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 231-348
Cow position: chrX:38114099-38113979 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 232-376
Cow position: chrX:32870876-32871022 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 89

Conread position: 232-381
Cow position: chrX:47247005-47247150 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 235-381
Cow position: chrX:27459164-27459014 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 237-373
Cow position: chrX:19771729-19771861 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 238-381
Cow position: chrX:5856422-5856564 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 117

Conread position: 238-390
Cow position: chrX:33538850-33538698 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 24, 65

Conread position: 242-381
Cow position: chrX:24102876-24102738 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 245-386
Cow position: chrX:33519512-33519371 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 247-383
Cow position: chrX:45420780-45420916 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 247-384
Cow position: chrX:919400-919535 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 101

Conread position: 247-384
Cow position: chrX:22115388-22115522 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 110

Conread position: 251-362
Cow position: chrX:29193892-29193786 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 22

Conread position: 254-380
Cow position: chrX:13360418-13360292 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 254-381
Cow position: chrX:30060645-30060772 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 55

Conread position: 254-381
Cow position: chrX:32747546-32747417 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 255-378
Cow position: chrX:34006013-34006136 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 256-381
Cow position: chrX:12314238-12314113 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 257-381
Cow position: chrX:41846651-41846775 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 261-390
Cow position: chrX:7710813-7710941 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 265-381
Cow position: chrX:616530-616647 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 265-386
Cow position: chrX:48578290-48578169 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 267-381
Cow position: chrX:39555943-39556058 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 269-418
Cow position: chrX:6654431-6654581 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 123, 136

Conread position: 275-381
Cow position: chrX:2351927-2351821 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 275-383
Cow position: chrX:22325941-22325834 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 277-378
Cow position: chrX:45410179-45410280 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.