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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055I03.5
        

               
Conread position:
               
1031-1346
               

               
Cow position:
               
chr16:43661628-43661293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 253
               

               
Conread position:
               
1034-1348
               

               
Cow position:
               
chr16:45047471-45047783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
1055-1348
               

               
Cow position:
               
chr16:11085238-11085531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
1056-1339
               

               
Cow position:
               
chr16:27261809-27262095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
140, 107
               

               
Conread position:
               
1057-1277
               

               
Cow position:
               
chr16:16933262-16933037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1057-1302
               

               
Cow position:
               
chr16:40514330-40514587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 196
               

               
Conread position:
               
1057-1320
               

               
Cow position:
               
chr16:37719303-37719031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 212
               

               
Conread position:
               
1057-1331
               

               
Cow position:
               
chr16:36120833-36121117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 171
               

               
Conread position:
               
1057-1339
               

               
Cow position:
               
chr16:42340344-42340051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 229
               

               
Conread position:
               
1057-1346
               

               
Cow position:
               
chr16:46627703-46627986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr16:8025706-8025999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr16:23025483-23025191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr16:48493325-48493025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1057-1349
               

               
Cow position:
               
chr16:10148430-10148122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
31, 84
               

               
Conread position:
               
1057-1351
               

               
Cow position:
               
chr16:8315049-8315341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
1060-1314
               

               
Cow position:
               
chr16:27014042-27013777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
1060-1344
               

               
Cow position:
               
chr16:15809119-15808824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
31, 132
               

               
Conread position:
               
1060-1348
               

               
Cow position:
               
chr16:7542446-7542131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
1060-1365
               

               
Cow position:
               
chr16:43505669-43505969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
1063-1334
               

               
Cow position:
               
chr16:28692602-28692860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
1063-1348
               

               
Cow position:
               
chr16:3633435-3633141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 121
               

               
Conread position:
               
1063-1365
               

               
Cow position:
               
chr16:14974406-14974703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
1064-1346
               

               
Cow position:
               
chr16:53627297-53627579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
1064-1365
               

               
Cow position:
               
chr16:689841-689541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
1072-1339
               

               
Cow position:
               
chr16:41689820-41689551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 147
               

               
Conread position:
               
1086-1348
               

               
Cow position:
               
chr16:11102708-11102978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
1086-1349
               

               
Cow position:
               
chr16:41696979-41697242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
1088-1310
               

               
Cow position:
               
chr16:47852484-47852708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
1088-1348
               

               
Cow position:
               
chr16:48190904-48191155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 6
               

               
Conread position:
               
1089-1370
               

               
Cow position:
               
chr16:3047232-3047517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
1090-1288
               

               
Cow position:
               
chr16:19670244-19670440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
1090-1324
               

               
Cow position:
               
chr16:45554552-45554313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1090-1348
               

               
Cow position:
               
chr16:238376-238112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
1090-1348
               

               
Cow position:
               
chr16:5364010-5363742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1090-1348
               

               
Cow position:
               
chr16:8322874-8323136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1090-1349
               

               
Cow position:
               
chr16:17627038-17626775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1091-1334
               

               
Cow position:
               
chr16:12633992-12633746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 146
               

               
Conread position:
               
1093-1305
               

               
Cow position:
               
chr16:33869660-33869870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1093-1323
               

               
Cow position:
               
chr16:44210453-44210694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1094-1255
               

               
Cow position:
               
chr16:33530513-33530353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1094-1275
               

               
Cow position:
               
chr16:8018073-8017888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
1094-1300
               

               
Cow position:
               
chr16:7619080-7619282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
1094-1300
               

               
Cow position:
               
chr16:30186747-30186539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
1094-1303
               

               
Cow position:
               
chr16:10945336-10945538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1094-1318
               

               
Cow position:
               
chr16:10162921-10162695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1094-1325
               

               
Cow position:
               
chr16:34998522-34998745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1094-1334
               

               
Cow position:
               
chr16:53830487-53830725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
1094-1337
               

               
Cow position:
               
chr16:8448550-8448787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
1094-1339
               

               
Cow position:
               
chr16:13969264-13969525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1094-1339
               

               
Cow position:
               
chr16:36203514-36203760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
1094-1340
               

               
Cow position:
               
chr16:26676582-26676835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
1094-1340
               

               
Cow position:
               
chr16:29038019-29037758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
131, 75
               

               
Conread position:
               
1094-1346
               

               
Cow position:
               
chr16:11957473-11957736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1094-1346
               

               
Cow position:
               
chr16:12274172-12273916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr16:23472853-23472593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr16:38243559-38243816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr16:40562336-40562077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr16:51869744-51869486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
1094-1349
               

               
Cow position:
               
chr16:24702954-24702697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
126, 13
               

               
Conread position:
               
1094-1382
               

               
Cow position:
               
chr16:11083101-11082822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
213, 34
               

               
Conread position:
               
1095-1370
               

               
Cow position:
               
chr16:36930215-36930495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
1096-1348
               

               
Cow position:
               
chr16:33704907-33704653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
1096-1348
               

               
Cow position:
               
chr16:49125426-49125682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
1097-1223
               

               
Cow position:
               
chr16:11391006-11390878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1097-1239
               

               
Cow position:
               
chr16:55945039-55945179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1257
               

               
Cow position:
               
chr16:30601522-30601355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1097-1262
               

               
Cow position:
               
chr16:8441707-8441870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
1097-1265
               

               
Cow position:
               
chr16:42433010-42433185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
1097-1266
               

               
Cow position:
               
chr16:17135825-17135657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
1097-1266
               

               
Cow position:
               
chr16:22327611-22327429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1097-1272
               

               
Cow position:
               
chr16:8273737-8273914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1273
               

               
Cow position:
               
chr16:38091122-38091302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
1097-1277
               

               
Cow position:
               
chr16:56670818-56671002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 153
               

               
Conread position:
               
1097-1278
               

               
Cow position:
               
chr16:44428984-44428797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1281
               

               
Cow position:
               
chr16:50931423-50931602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
1097-1281
               

               
Cow position:
               
chr16:56665676-56665488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1282
               

               
Cow position:
               
chr16:30358962-30359147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1097-1289
               

               
Cow position:
               
chr16:44683556-44683755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
1097-1290
               

               
Cow position:
               
chr16:12501060-12501256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
1097-1290
               

               
Cow position:
               
chr16:48545922-48545726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1097-1293
               

               
Cow position:
               
chr16:9500623-9500419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1304
               

               
Cow position:
               
chr16:43674975-43674766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
1097-1305
               

               
Cow position:
               
chr16:4399836-4399627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1097-1307
               

               
Cow position:
               
chr16:6270055-6269845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
1097-1308
               

               
Cow position:
               
chr16:27160763-27160978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
1097-1310
               

               
Cow position:
               
chr16:29677533-29677745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1311
               

               
Cow position:
               
chr16:7429480-7429261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1311
               

               
Cow position:
               
chr16:13578760-13578976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1311
               

               
Cow position:
               
chr16:54226499-54226715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr16:18052431-18052214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr16:22984854-22984641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr16:56796565-56796782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chr16:34753859-34754079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chr16:46452642-46452854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 155
               

               
Conread position:
               
1097-1318
               

               
Cow position:
               
chr16:10032740-10032517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1323
               

               
Cow position:
               
chr16:23955731-23955955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
131, 184
               

               
Conread position:
               
1097-1331
               

               
Cow position:
               
chr16:29096022-29095803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1097-1332
               

               
Cow position:
               
chr16:41578327-41578088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 147
               

               
Conread position:
               
1097-1332
               

               
Cow position:
               
chr16:51697186-51696941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 182
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr16:4857001-4857236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr16:18206060-18205821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 115
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr16:22841959-22842199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 9
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr16:29608610-29608379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
210, 84
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chr16:4059456-4059213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chr16:10773222-10772990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
209, 76
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chr16:48385302-48385543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chr16:3634217-3633969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 184
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chr16:13611353-13611595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 121
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:13195239-13195486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:22804497-22804736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 104
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:25170494-25170246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 239
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:29766427-29766191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:48145302-48145552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:54342087-54341843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 129
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr16:54679766-54679524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
139, 41
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr16:8811992-8812228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr16:8933327-8933572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr16:13689767-13689519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr16:27723325-27723067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
123, 110
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr16:41530199-41530437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 123
               

               
Conread position:
               
1097-1342
               

               
Cow position:
               
chr16:8065787-8066033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 158
               

               
Conread position:
               
1097-1342
               

               
Cow position:
               
chr16:33646116-33645867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 169
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr16:15960189-15960442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr16:37452513-37452769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr16:48494453-48494704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
136, 214
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr16:51598512-51598756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
210, 86
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:570819-571065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:5257097-5256848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 184
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:7505185-7504936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:13712832-13713064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 140
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:23564233-23563984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
192, 93
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr16:50688622-50688373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
136, 174
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr16:5896519-5896266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr16:12060517-12060264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr16:20025542-20025294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 66
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr16:20205562-20205303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr16:38663610-38663861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:1548777-1549027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:4192333-4192573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:4910424-4910685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:5725568-5725314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 184
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:5836686-5836429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 206
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:6319304-6319044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:6379024-6379261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
210, 65
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7152071-7152327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 41
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7418478-7418230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
201, 21
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7456365-7456614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7499151-7498910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7550068-7549814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:7665738-7665481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 144
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:8522289-8522549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:9973398-9973652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:9985292-9985540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
210, 114
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:13698616-13698358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:14242469-14242218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:14568388-14568635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:14685289-14685543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:14758836-14758578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:15370787-15370525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:16597658-16597412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:17143035-17142782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
207, 128
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:17289048-17288787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:17945622-17945368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
139, 212
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:17982042-17982296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:20633775-20634032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:22380253-22380509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:23681462-23681216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:25380394-25380650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 135
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:25387074-25386827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 82
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:25839721-25839465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:29712520-29712266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
132, 106
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:31348665-31348921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:32132608-32132371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
210, 53
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:32301905-32302146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:33198338-33198588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:35623149-35623395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:37669636-37669890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 146
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:38119349-38119599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
209, 123
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:38708736-38708984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:39165340-39165090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 95
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:42444257-42444002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:42733910-42734167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:45676762-45677006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:45702871-45703128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
209, 115
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:46552895-46552660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 111
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:47855039-47854789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:48006392-48006641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 152
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:48095664-48095915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 190
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:49169280-49169539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:51247035-51246794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:52133416-52133669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 122
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:52275028-52275284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:52834787-52835036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 179
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:52854921-52855178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 132
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:52889310-52889562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:53086240-53086483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
111, 89
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:53508884-53509140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
123, 63
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:54664698-54664953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:56082264-56082514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 233
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:56231928-56231673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 155
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr16:56831641-56831891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 16
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr16:23871549-23871803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
139, 146
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr16:24826174-24825917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr16:26649528-26649784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr16:42633643-42633908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr16:45457063-45456802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 180
               

               
Conread position:
               
1097-1350
               

               
Cow position:
               
chr16:19003432-19003672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
213, 119
               

               
Conread position:
               
1097-1356
               

               
Cow position:
               
chr16:45348487-45348218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
1097-1364
               

               
Cow position:
               
chr16:21317492-21317762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
137, 171
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:8076401-8076679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:8193554-8193277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:9497166-9497449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:22773080-22772797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 172
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:34153470-34153745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:43105415-43105684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:49336324-49336060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
129, 72
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr16:56875563-56875820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
207, 84
               

               
Conread position:
               
1097-1369
               

               
Cow position:
               
chr16:18402787-18402513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
1097-1370
               

               
Cow position:
               
chr16:10039746-10040014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
1097-1371
               

               
Cow position:
               
chr16:31117514-31117791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chr16:14754222-14754499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 142
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chr16:18353857-18354129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chr16:50282331-50282604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
1097-1373
               

               
Cow position:
               
chr16:12360872-12361155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1097-1393
               

               
Cow position:
               
chr16:26372850-26373150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
1097-1399
               

               
Cow position:
               
chr16:12320322-12320014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
133, 161
               

               
Conread position:
               
1098-1305
               

               
Cow position:
               
chr16:26323418-26323624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
111, 103
               

               
Conread position:
               
1098-1323
               

               
Cow position:
               
chr16:40446361-40446123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
138, 62
               

               
Conread position:
               
1098-1332
               

               
Cow position:
               
chr16:21450947-21450706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
1098-1336
               

               
Cow position:
               
chr16:56510114-56510351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
1098-1339
               

               
Cow position:
               
chr16:47662828-47662567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
1098-1340
               

               
Cow position:
               
chr16:28922873-28922639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
208, 78
               

               
Conread position:
               
1098-1340
               

               
Cow position:
               
chr16:38905134-38905375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
208, 127
               

               
Conread position:
               
1098-1346
               

               
Cow position:
               
chr16:18757739-18757992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:4698888-4699132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
209, 127
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:6344342-6344589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:7702619-7702381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:22808458-22808706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 141
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:23738281-23738025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
122, 158
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:48340594-48340849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:51069813-51070079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr16:55683398-55683143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
1098-1349
               

               
Cow position:
               
chr16:35297177-35296918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
1098-1349
               

               
Cow position:
               
chr16:45610085-45609836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
209, 99
               

               
Conread position:
               
1099-1337
               

               
Cow position:
               
chr16:13990074-13989839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
1099-1344
               

               
Cow position:
               
chr16:42242019-42242266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 39
               

               
Conread position:
               
1099-1345
               

               
Cow position:
               
chr16:54579265-54579019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
1099-1346
               

               
Cow position:
               
chr16:51112781-51113029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 97
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chr16:29655424-29655175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
162, 131
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chr16:30036892-30037145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chr16:43276117-43275868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
1099-1365
               

               
Cow position:
               
chr16:5845769-5845499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
1100-1325
               

               
Cow position:
               
chr16:39683003-39683239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1102-1334
               

               
Cow position:
               
chr16:5415665-5415903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
1103-1268
               

               
Cow position:
               
chr16:31426437-31426271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1103-1346
               

               
Cow position:
               
chr16:49229673-49229923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1103-1369
               

               
Cow position:
               
chr16:25965594-25965322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
1105-1348
               

               
Cow position:
               
chr16:11774955-11775204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
1106-1337
               

               
Cow position:
               
chr16:56565688-56565453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1107-1348
               

               
Cow position:
               
chr16:47643505-47643263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 147
               

               
Conread position:
               
1108-1288
               

               
Cow position:
               
chr16:28880029-28879847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
1108-1348
               

               
Cow position:
               
chr16:22009235-22009007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
1109-1346
               

               
Cow position:
               
chr16:47964730-47964967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
198, 116
               

               
Conread position:
               
1109-1348
               

               
Cow position:
               
chr16:39513987-39514229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 44
               

               
Conread position:
               
1110-1298
               

               
Cow position:
               
chr16:42176734-42176541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
110, 139
               

               
Conread position:
               
1110-1317
               

               
Cow position:
               
chr16:53089263-53089463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
197, 59
               

               
Conread position:
               
1110-1339
               

               
Cow position:
               
chr16:42752938-42752710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chr16:45693233-45692993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:4902676-4902435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:10592519-10592281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:11105642-11105399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:23822939-23823173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 109
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:35758290-35758058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
196, 141
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr16:45139754-45139518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
1110-1365
               

               
Cow position:
               
chr16:820338-820080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 235
               

               
Conread position:
               
1110-1365
               

               
Cow position:
               
chr16:32327746-32327481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1112-1348
               

               
Cow position:
               
chr16:33790752-33790983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
1113-1292
               

               
Cow position:
               
chr16:36286599-36286778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
1113-1312
               

               
Cow position:
               
chr16:54734323-54734129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1113-1328
               

               
Cow position:
               
chr16:33267798-33267582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
1113-1340
               

               
Cow position:
               
chr16:3614825-3614601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
112, 37
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chr16:10857535-10857777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 169
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chr16:50289237-50288995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chr16:50521561-50521324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 10
               

               
Conread position:
               
1113-1349
               

               
Cow position:
               
chr16:5727018-5726767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
1113-1349
               

               
Cow position:
               
chr16:43308475-43308720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
1113-1365
               

               
Cow position:
               
chr16:23366325-23366075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
1113-1372
               

               
Cow position:
               
chr16:48086782-48087048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 141
               

               
Conread position:
               
1114-1285
               

               
Cow position:
               
chr16:26030799-26030973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 166
               

               
Conread position:
               
1114-1346
               

               
Cow position:
               
chr16:26610723-26610486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
1114-1348
               

               
Cow position:
               
chr16:53891702-53891935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
148, 73
               

               
Conread position:
               
1114-1349
               

               
Cow position:
               
chr16:52636300-52636535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
1115-1317
               

               
Cow position:
               
chr16:13483493-13483696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
1115-1346
               

               
Cow position:
               
chr16:29380333-29380102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
1115-1366
               

               
Cow position:
               
chr16:15504437-15504694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1117-1350
               

               
Cow position:
               
chr16:35937418-35937184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
1118-1271
               

               
Cow position:
               
chr16:15752782-15752628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1118-1332
               

               
Cow position:
               
chr16:50453838-50453624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
1118-1337
               

               
Cow position:
               
chr16:11094747-11094972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 185
               

               
Conread position:
               
1118-1337
               

               
Cow position:
               
chr16:42257527-42257304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
1118-1348
               

               
Cow position:
               
chr16:30143120-30143363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1118-1348
               

               
Cow position:
               
chr16:38621034-38620808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 14
               

               
Conread position:
               
1119-1313
               

               
Cow position:
               
chr16:2417510-2417708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1119-1325
               

               
Cow position:
               
chr16:19047355-19047569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1334
               

               
Cow position:
               
chr16:38020187-38019972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
115, 170
               

               
Conread position:
               
1119-1338
               

               
Cow position:
               
chr16:16552640-16552418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:2223318-2223555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:6887371-6887597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:9729274-9729053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:14361182-14360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:23483361-23483140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:31269219-31268989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:33299473-33299241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:44744054-44744290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr16:55042489-55042711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1348
               

               
Cow position:
               
chr16:20476610-20476382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
1119-1349
               

               
Cow position:
               
chr16:53048631-53048400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
1119-1365
               

               
Cow position:
               
chr16:35343394-35343643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1369
               

               
Cow position:
               
chr16:3246126-3246381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 146
               

               
Conread position:
               
1120-1305
               

               
Cow position:
               
chr16:50667369-50667176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1120-1309
               

               
Cow position:
               
chr16:45731309-45731501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 187
               

               
Conread position:
               
1120-1332
               

               
Cow position:
               
chr16:9905168-9904955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
108, 189
               

               
Conread position:
               
1120-1345
               

               
Cow position:
               
chr16:13306794-13307014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
187, 83
               

               
Conread position:
               
1120-1346
               

               
Cow position:
               
chr16:29557553-29557779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
188, 42
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:4626313-4626545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
119, 145
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:8068746-8068976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:13752054-13752278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
188, 100
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:16096814-16096582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:20069910-20069674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
112, 206
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:33226461-33226692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr16:49126109-49126339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
1120-1349
               

               
Cow position:
               
chr16:11806749-11806521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
1120-1349
               

               
Cow position:
               
chr16:30715582-30715341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 156
               

               
Conread position:
               
1120-1369
               

               
Cow position:
               
chr16:43800839-43801093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 227
               

               
Conread position:
               
1121-1334
               

               
Cow position:
               
chr16:54225442-54225646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
1121-1336
               

               
Cow position:
               
chr16:33595860-33596077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
186, 110
               

               
Conread position:
               
1121-1336
               

               
Cow position:
               
chr16:54084113-54083893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chr16:7442025-7442256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
105, 10
               

               
Conread position:
               
1121-1349
               

               
Cow position:
               
chr16:8493914-8494152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1121-1365
               

               
Cow position:
               
chr16:11008422-11008174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
1121-1365
               

               
Cow position:
               
chr16:47384988-47385233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
1121-1372
               

               
Cow position:
               
chr16:16402250-16402500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
1121-1372
               

               
Cow position:
               
chr16:17745913-17745658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
104, 248
               

               
Conread position:
               
1122-1301
               

               
Cow position:
               
chr16:18141251-18141434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chr16:6262778-6263014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chr16:7075988-7075759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 45
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chr16:9933234-9933005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
1122-1349
               

               
Cow position:
               
chr16:15762080-15762314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1123-1346
               

               
Cow position:
               
chr16:15824368-15824596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
1123-1348
               

               
Cow position:
               
chr16:32970005-32970232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1124-1349
               

               
Cow position:
               
chr16:11791084-11790862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
1124-1349
               

               
Cow position:
               
chr16:42078774-42078995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
1125-1348
               

               
Cow position:
               
chr16:47343547-47343322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 6
               

               
Conread position:
               
1126-1349
               

               
Cow position:
               
chr16:24023226-24023450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 5
               

               
Conread position:
               
1127-1337
               

               
Cow position:
               
chr16:41752506-41752715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
1128-1348
               

               
Cow position:
               
chr16:35188323-35188100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1129-1304
               

               
Cow position:
               
chr16:4016473-4016647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1130-1339
               

               
Cow position:
               
chr16:22860701-22860905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
177, 92
               

               
Conread position:
               
1130-1340
               

               
Cow position:
               
chr16:13232881-13233094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1130-1340
               

               
Cow position:
               
chr16:17903577-17903794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1130-1346
               

               
Cow position:
               
chr16:46521957-46521744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 22
               

               
Conread position:
               
1130-1348
               

               
Cow position:
               
chr16:9136236-9136022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
177, 45
               

               
Conread position:
               
1131-1299
               

               
Cow position:
               
chr16:20872089-20871923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 110
               

               
Conread position:
               
1131-1305
               

               
Cow position:
               
chr16:31163060-31163236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
1131-1312
               

               
Cow position:
               
chr16:16565187-16565006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
1131-1322
               

               
Cow position:
               
chr16:27020138-27019946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
1131-1324
               

               
Cow position:
               
chr16:8958989-8959189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 96
               

               
Conread position:
               
1131-1325
               

               
Cow position:
               
chr16:30369414-30369222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
159, 106
               

               
Conread position:
               
1131-1329
               

               
Cow position:
               
chr16:21723533-21723736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1131-1342
               

               
Cow position:
               
chr16:601012-600801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
176, 7
               

               
Conread position:
               
1131-1344
               

               
Cow position:
               
chr16:37117141-37116921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
1131-1345
               

               
Cow position:
               
chr16:3587445-3587231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
164, 93
               

               
Conread position:
               
1131-1345
               

               
Cow position:
               
chr16:37380337-37380116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
81, 194
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:3821595-3821385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:4971960-4972173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:7077676-7077895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 160
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:16236058-16236280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:30096068-30096282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
175, 24
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:30290375-30290165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:34168653-34168443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:35195546-35195757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 102
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr16:56787709-56787930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
97, 202
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr16:16265034-16265253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr16:16548680-16548457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 212
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr16:29159187-29158978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
176, 32
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr16:39646612-39646396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 152
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr16:42200966-42200739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:7582781-7582561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:8840959-8840738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:11815525-11815757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 212
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:24672291-24672512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:42217623-42217841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
175, 88
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:50906544-50906316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr16:53428324-53428102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1131-1365
               

               
Cow position:
               
chr16:4981310-4981552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 218
               

               
Conread position:
               
1131-1365
               

               
Cow position:
               
chr16:28833910-28833668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 161
               

               
Conread position:
               
1131-1365
               

               
Cow position:
               
chr16:44147365-44147599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
1131-1371
               

               
Cow position:
               
chr16:46752204-46752447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1131-1372
               

               
Cow position:
               
chr16:591744-591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
1132-1296
               

               
Cow position:
               
chr16:24252883-24252718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
1132-1344
               

               
Cow position:
               
chr16:31978120-31978337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 133
               

               
Conread position:
               
1132-1348
               

               
Cow position:
               
chr16:56937802-56937592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 88
               

               
Conread position:
               
1132-1349
               

               
Cow position:
               
chr16:7011135-7010915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
1133-1338
               

               
Cow position:
               
chr16:24747351-24747156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 115
               

               
Conread position:
               
1133-1339
               

               
Cow position:
               
chr16:7583462-7583252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1133-1343
               

               
Cow position:
               
chr16:53553654-53553862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
1133-1366
               

               
Cow position:
               
chr16:47243026-47242788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 125
               

               
Conread position:
               
1134-1305
               

               
Cow position:
               
chr16:18745797-18745624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1134-1316
               

               
Cow position:
               
chr16:5907415-5907229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1134-1346
               

               
Cow position:
               
chr16:38191537-38191320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
1134-1348
               

               
Cow position:
               
chr16:10650824-10651044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1136-1347
               

               
Cow position:
               
chr16:14106704-14106493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
169, 95
               

               
Conread position:
               
1137-1347
               

               
Cow position:
               
chr16:41590838-41590622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
1137-1348
               

               
Cow position:
               
chr16:21369545-21369329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
1139-1336
               

               
Cow position:
               
chr16:14699977-14699777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
1139-1348
               

               
Cow position:
               
chr16:19756735-19756947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
1139-1365
               

               
Cow position:
               
chr16:39238005-39237776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
1140-1348
               

               
Cow position:
               
chr16:24637286-24637489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 43
               

               
Conread position:
               
1142-1339
               

               
Cow position:
               
chr16:30515533-30515737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
1142-1346
               

               
Cow position:
               
chr16:47245645-47245432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
1142-1347
               

               
Cow position:
               
chr16:24228297-24228503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
1146-1348
               

               
Cow position:
               
chr16:26342318-26342122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
161, 89
               

               
Conread position:
               
1147-1319
               

               
Cow position:
               
chr16:24249779-24249958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1147-1325
               

               
Cow position:
               
chr16:30135846-30136025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
1147-1348
               

               
Cow position:
               
chr16:4145114-4144910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
1147-1348
               

               
Cow position:
               
chr16:21905213-21905012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
1147-1348
               

               
Cow position:
               
chr16:49404108-49404305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
1148-1348
               

               
Cow position:
               
chr16:11619799-11619596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
1148-1349
               

               
Cow position:
               
chr16:46655334-46655130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1149-1346
               

               
Cow position:
               
chr16:26702865-26703070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 132
               

               
Conread position:
               
1149-1349
               

               
Cow position:
               
chr16:53595476-53595675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
1152-1349
               

               
Cow position:
               
chr16:46434070-46434280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
1155-1347
               

               
Cow position:
               
chr16:54287909-54287719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
1156-1337
               

               
Cow position:
               
chr16:45535220-45535037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
1157-1348
               

               
Cow position:
               
chr16:42072689-42072883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
1160-1346
               

               
Cow position:
               
chr16:13973249-13973433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 6
               

               
Conread position:
               
1161-1345
               

               
Cow position:
               
chr16:4372456-4372645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 126
               

               
Conread position:
               
1164-1337
               

               
Cow position:
               
chr16:44676908-44676730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
1164-1340
               

               
Cow position:
               
chr16:7496231-7496052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
1164-1345
               

               
Cow position:
               
chr16:17665667-17665485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
1164-1349
               

               
Cow position:
               
chr16:43537774-43537587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
142, 164
               

               
Conread position:
               
1164-1393
               

               
Cow position:
               
chr16:27249438-27249211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
150, 87
               

               
Conread position:
               
1166-1366
               

               
Cow position:
               
chr16:6692569-6692781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 186
               

               
Conread position:
               
1167-1348
               

               
Cow position:
               
chr16:13791548-13791363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
1169-1349
               

               
Cow position:
               
chr16:50189562-50189745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1171-1310
               

               
Cow position:
               
chr16:30614953-30615095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1171-1339
               

               
Cow position:
               
chr16:4712927-4712755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
1171-1349
               

               
Cow position:
               
chr16:56912686-56912872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1173-1349
               

               
Cow position:
               
chr16:30706132-30705955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chr16:22868156-22868329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chr16:33230098-33229923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
1177-1340
               

               
Cow position:
               
chr16:16280427-16280591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 110
               

               
Conread position:
               
1177-1348
               

               
Cow position:
               
chr16:39417099-39417271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1181-1342
               

               
Cow position:
               
chr16:814906-814747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
1181-1347
               

               
Cow position:
               
chr16:9790614-9790784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1181-1349
               

               
Cow position:
               
chr16:4103145-4103313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
1181-1356
               

               
Cow position:
               
chr16:26068949-26068771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 150
               

               
Conread position:
               
1183-1349
               

               
Cow position:
               
chr16:39704824-39704993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
1183-1361
               

               
Cow position:
               
chr16:41037705-41037524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 67
               

               
Conread position:
               
1183-1365
               

               
Cow position:
               
chr16:44973509-44973324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr16:8807079-8807245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr16:30311092-30311264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1184-1365
               

               
Cow position:
               
chr16:4503296-4503109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
1184-1365
               

               
Cow position:
               
chr16:51399737-51399917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
1184-1372
               

               
Cow position:
               
chr16:26501172-26500983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
1187-1311
               

               
Cow position:
               
chr16:15888052-15888177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1187-1346
               

               
Cow position:
               
chr16:31159561-31159725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1187-1348
               

               
Cow position:
               
chr16:11620801-11620958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
1187-1348
               

               
Cow position:
               
chr16:24672875-24673040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
1188-1348
               

               
Cow position:
               
chr16:29067171-29067014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
1191-1346
               

               
Cow position:
               
chr16:56150309-56150150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
1191-1365
               

               
Cow position:
               
chr16:10462517-10462688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
1192-1346
               

               
Cow position:
               
chr16:14028623-14028779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
1194-1339
               

               
Cow position:
               
chr16:23810915-23810768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1194-1339
               

               
Cow position:
               
chr16:47509973-47510116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
1194-1340
               

               
Cow position:
               
chr16:47620383-47620235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1194-1348
               

               
Cow position:
               
chr16:30209754-30209599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
1194-1348
               

               
Cow position:
               
chr16:43804497-43804343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
1194-1355
               

               
Cow position:
               
chr16:28198289-28198129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
1197-1390
               

               
Cow position:
               
chr16:25287690-25287879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
109, 39
               

               
Conread position:
               
1199-1348
               

               
Cow position:
               
chr16:15189178-15189031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
1201-1363
               

               
Cow position:
               
chr16:30045912-30045747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
1203-1348
               

               
Cow position:
               
chr16:5741235-5741090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
1208-1334
               

               
Cow position:
               
chr16:8621224-8621094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
1208-1344
               

               
Cow position:
               
chr16:51530977-51531122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1217-1348
               

               
Cow position:
               
chr16:49252778-49252908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
1220-1348
               

               
Cow position:
               
chr16:42253590-42253722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1221-1336
               

               
Cow position:
               
chr16:12106855-12106740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1222-1348
               

               
Cow position:
               
chr16:23187251-23187120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
1224-1348
               

               
Cow position:
               
chr16:28192039-28191917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
1225-1344
               

               
Cow position:
               
chr16:12454856-12454978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1225-1348
               

               
Cow position:
               
chr16:33357708-33357830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 26
               

               
Conread position:
               
1225-1358
               

               
Cow position:
               
chr16:7034283-7034153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 51
               

               
Conread position:
               
1228-1334
               

               
Cow position:
               
chr16:33752164-33752056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1228-1365
               

               
Cow position:
               
chr16:30939702-30939562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1229-1322
               

               
Cow position:
               
chr16:18155749-18155654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1229-1348
               

               
Cow position:
               
chr16:7082767-7082889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1232-1348
               

               
Cow position:
               
chr16:37062429-37062549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1245-1369
               

               
Cow position:
               
chr16:589966-590093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1246-1332
               

               
Cow position:
               
chr16:53224864-53224953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.