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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055I03.5
        

               
Conread position:
               
1031-1340
               

               
Cow position:
               
chr17:924091-923770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 258
               

               
Conread position:
               
1038-1348
               

               
Cow position:
               
chr17:19891825-19891506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
1048-1322
               

               
Cow position:
               
chr17:29898810-29898550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1048-1334
               

               
Cow position:
               
chr17:3354080-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
1057-1221
               

               
Cow position:
               
chr17:12342299-12342464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1057-1334
               

               
Cow position:
               
chr17:11101615-11101899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
1057-1339
               

               
Cow position:
               
chr17:18860536-18860828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1057-1346
               

               
Cow position:
               
chr17:21373858-21373569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr17:1783423-1783718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 66
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr17:24580111-24580409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 14
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr17:27819480-27819190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chr17:30539096-30539364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
248, 28
               

               
Conread position:
               
1060-1348
               

               
Cow position:
               
chr17:5224582-5224284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
1060-1348
               

               
Cow position:
               
chr17:35387819-35388126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
1060-1353
               

               
Cow position:
               
chr17:23563612-23563907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 171
               

               
Conread position:
               
1060-1365
               

               
Cow position:
               
chr17:21243609-21243913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 104
               

               
Conread position:
               
1063-1336
               

               
Cow position:
               
chr17:8926039-8926317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
1065-1228
               

               
Cow position:
               
chr17:12288969-12288804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1072-1372
               

               
Cow position:
               
chr17:5006320-5006623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
1074-1337
               

               
Cow position:
               
chr17:21495534-21495274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
74, 23
               

               
Conread position:
               
1079-1348
               

               
Cow position:
               
chr17:1410079-1410352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1079-1348
               

               
Cow position:
               
chr17:3467910-3467654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
228, 15
               

               
Conread position:
               
1079-1365
               

               
Cow position:
               
chr17:27048313-27048029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 18
               

               
Conread position:
               
1088-1312
               

               
Cow position:
               
chr17:21755285-21755505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1089-1280
               

               
Cow position:
               
chr17:20810340-20810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
22, 17
               

               
Conread position:
               
1090-1303
               

               
Cow position:
               
chr17:40639093-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1090-1349
               

               
Cow position:
               
chr17:34078962-34079214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
1093-1372
               

               
Cow position:
               
chr17:26085167-26084898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
1094-1275
               

               
Cow position:
               
chr17:17044188-17044372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1094-1282
               

               
Cow position:
               
chr17:37816050-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1094-1288
               

               
Cow position:
               
chr17:4213887-4213694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
1094-1295
               

               
Cow position:
               
chr17:5372382-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1094-1305
               

               
Cow position:
               
chr17:17180188-17179981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
1094-1305
               

               
Cow position:
               
chr17:21806307-21806518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 187
               

               
Conread position:
               
1094-1323
               

               
Cow position:
               
chr17:15376735-15376521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1094-1328
               

               
Cow position:
               
chr17:21489481-21489717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 102
               

               
Conread position:
               
1094-1338
               

               
Cow position:
               
chr17:15299736-15299978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
1094-1340
               

               
Cow position:
               
chr17:18146329-18146078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
1094-1344
               

               
Cow position:
               
chr17:36791271-36791026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
1094-1346
               

               
Cow position:
               
chr17:30728649-30728411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
1094-1347
               

               
Cow position:
               
chr17:12929387-12929651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:7698191-7697944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:9565445-9565196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:12536320-12536581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:12591318-12591054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:15664821-15664555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:18108943-18109199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:20990045-20990307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:25097599-25097350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:25901345-25901084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:31856815-31856550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chr17:40771975-40771722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
1094-1349
               

               
Cow position:
               
chr17:7229652-7229398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
1095-1340
               

               
Cow position:
               
chr17:7654306-7654560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1095-1348
               

               
Cow position:
               
chr17:14848403-14848640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
1096-1311
               

               
Cow position:
               
chr17:25718245-25718035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1096-1375
               

               
Cow position:
               
chr17:33275608-33275885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
131, 68
               

               
Conread position:
               
1097-1202
               

               
Cow position:
               
chr17:25139404-25139299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1097-1216
               

               
Cow position:
               
chr17:37430364-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1097-1226
               

               
Cow position:
               
chr17:25930399-25930527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
1097-1237
               

               
Cow position:
               
chr17:21788518-21788657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1254
               

               
Cow position:
               
chr17:34836312-34836152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1259
               

               
Cow position:
               
chr17:25584382-25584216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
1097-1265
               

               
Cow position:
               
chr17:27303828-27303987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1097-1269
               

               
Cow position:
               
chr17:35149388-35149561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
1097-1271
               

               
Cow position:
               
chr17:24862599-24862429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
151, 127
               

               
Conread position:
               
1097-1279
               

               
Cow position:
               
chr17:950112-949932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
1097-1283
               

               
Cow position:
               
chr17:26730470-26730656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1097-1284
               

               
Cow position:
               
chr17:5011979-5011801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
1097-1285
               

               
Cow position:
               
chr17:25126491-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1097-1289
               

               
Cow position:
               
chr17:28814352-28814551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 187
               

               
Conread position:
               
1097-1303
               

               
Cow position:
               
chr17:9824810-9824602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1304
               

               
Cow position:
               
chr17:15684651-15684445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
1097-1305
               

               
Cow position:
               
chr17:2662565-2662355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1097-1305
               

               
Cow position:
               
chr17:26448683-26448473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
1097-1309
               

               
Cow position:
               
chr17:7571244-7571029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
131, 177
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr17:1469516-1469301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr17:14050067-14050278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr17:22056887-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 128
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chr17:29026213-29025991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chr17:1466276-1466507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1097-1315
               

               
Cow position:
               
chr17:2810773-2810542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1097-1316
               

               
Cow position:
               
chr17:22128063-22127846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1317
               

               
Cow position:
               
chr17:38263349-38263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
128, 188
               

               
Conread position:
               
1097-1320
               

               
Cow position:
               
chr17:29356099-29356314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
90, 81
               

               
Conread position:
               
1097-1321
               

               
Cow position:
               
chr17:21758000-21758224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
210, 128
               

               
Conread position:
               
1097-1323
               

               
Cow position:
               
chr17:25342600-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
209, 0
               

               
Conread position:
               
1097-1324
               

               
Cow position:
               
chr17:10431833-10432065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1097-1325
               

               
Cow position:
               
chr17:21922493-21922712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 171
               

               
Conread position:
               
1097-1326
               

               
Cow position:
               
chr17:2275611-2275383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 123
               

               
Conread position:
               
1097-1326
               

               
Cow position:
               
chr17:27202905-27203135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 135
               

               
Conread position:
               
1097-1327
               

               
Cow position:
               
chr17:38833184-38832951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr17:5900510-5900268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 218
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chr17:20126737-20126515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chr17:21325473-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
136, 153
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chr17:35338780-35339017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
210, 120
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chr17:7803034-7803277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 184
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chr17:27058416-27058656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 232
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr17:15340611-15340856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
96, 126
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr17:18495379-18495624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 66
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr17:33933602-33933852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr17:37479861-37480098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chr17:40741792-40741542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr17:1493008-1493260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
133, 185
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr17:11362315-11362073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr17:14003966-14003713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1097-1340
               

               
Cow position:
               
chr17:32993483-32993723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
1097-1342
               

               
Cow position:
               
chr17:39715296-39715050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 29
               

               
Conread position:
               
1097-1343
               

               
Cow position:
               
chr17:18920230-18920458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
1097-1344
               

               
Cow position:
               
chr17:11831974-11832228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 159
               

               
Conread position:
               
1097-1344
               

               
Cow position:
               
chr17:25189426-25189177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr17:21003689-21003938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr17:32278766-32279013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chr17:32280806-32280559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 45
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr17:14025769-14026027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr17:30718277-30718530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
154, 127
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr17:32027311-32027569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr17:40673511-40673275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
210, 127
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chr17:43717195-43717425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 68
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr17:37699209-37699468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
127, 147
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chr17:39736315-39736069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
168, 84
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:908881-908633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
210, 115
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:1114029-1113772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:1562646-1562883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
210, 64
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:1634351-1634600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
156, 129
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:4611922-4612190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 190
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:5422928-5423182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 164
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:5898386-5898638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 175
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:6329256-6328999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:6848935-6848692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
210, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:9117785-9117534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 135
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:9854117-9853877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
209, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:10458791-10459050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:10561775-10561517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
73, 110
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:11156353-11156602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
210, 62
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:11397806-11397557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:11618725-11618471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:15102753-15102997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
210, 153
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:16371397-16371142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:17410434-17410176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:18592583-18592331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 169
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:20234352-20234115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
210, 90
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:20884664-20884410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:20932472-20932216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:20992901-20993153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:21335551-21335807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:21680920-21680659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:21959547-21959800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:21972989-21973246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:22032554-22032803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:23101078-23101320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
233, 119
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:24077542-24077288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 60
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:24554138-24553895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:24786883-24787130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:24822002-24821753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:25128212-25128459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
210, 121
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:27429706-27429469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:28468263-28468023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:30529404-30529654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
209, 143
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:31037236-31037493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:32138283-32138527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 155
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:32349208-32348961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:32471640-32471903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:36203345-36203603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chr17:43141569-43141831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr17:1035456-1035713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 250
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr17:7760332-7760578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr17:8079453-8079203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 126
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chr17:17060542-17060793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
1097-1355
               

               
Cow position:
               
chr17:13243909-13244161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
1097-1359
               

               
Cow position:
               
chr17:24559431-24559169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 140
               

               
Conread position:
               
1097-1361
               

               
Cow position:
               
chr17:11215091-11215355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
1097-1361
               

               
Cow position:
               
chr17:36864771-36864505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
154, 147
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:9911898-9911635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:11280959-11281237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:12219798-12220068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
209, 135
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:12289268-12289545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 205
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:14033501-14033770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 93
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:20874537-20874260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
123, 111
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:21114813-21115080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
210, 170
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chr17:21738733-21739010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1097-1367
               

               
Cow position:
               
chr17:24883430-24883698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1097-1369
               

               
Cow position:
               
chr17:32989617-32989349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
1097-1373
               

               
Cow position:
               
chr17:9746653-9746381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
1097-1373
               

               
Cow position:
               
chr17:29292241-29292504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
1097-1379
               

               
Cow position:
               
chr17:34751265-34751544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1098-1293
               

               
Cow position:
               
chr17:7590323-7590514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1098-1293
               

               
Cow position:
               
chr17:16158631-16158434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1098-1318
               

               
Cow position:
               
chr17:23883129-23883339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 32
               

               
Conread position:
               
1098-1346
               

               
Cow position:
               
chr17:979027-979267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
208, 73
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:6566621-6566354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 191
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:8690312-8690555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
135, 46
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:9965887-9966141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:12306257-12306505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 156
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:20848662-20848413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 78
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chr17:40288860-40289111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
208, 127
               

               
Conread position:
               
1098-1349
               

               
Cow position:
               
chr17:25796197-25796450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
1098-1349
               

               
Cow position:
               
chr17:27183804-27184056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
1099-1304
               

               
Cow position:
               
chr17:11839861-11839648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1099-1334
               

               
Cow position:
               
chr17:34948773-34948538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chr17:3503720-3503469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
1100-1254
               

               
Cow position:
               
chr17:4833390-4833543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1100-1340
               

               
Cow position:
               
chr17:21628615-21628372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
1100-1348
               

               
Cow position:
               
chr17:6936543-6936777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
1100-1349
               

               
Cow position:
               
chr17:26000255-26000003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
1102-1347
               

               
Cow position:
               
chr17:31480902-31481148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
1103-1280
               

               
Cow position:
               
chr17:28982314-28982134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 46
               

               
Conread position:
               
1103-1316
               

               
Cow position:
               
chr17:36275468-36275259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
1103-1345
               

               
Cow position:
               
chr17:7137113-7136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 5
               

               
Conread position:
               
1104-1367
               

               
Cow position:
               
chr17:9056564-9056820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
115, 201
               

               
Conread position:
               
1106-1348
               

               
Cow position:
               
chr17:8544438-8544193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
1110-1257
               

               
Cow position:
               
chr17:7851215-7851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1110-1292
               

               
Cow position:
               
chr17:4891235-4891416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 116
               

               
Conread position:
               
1110-1293
               

               
Cow position:
               
chr17:9770631-9770454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
1110-1328
               

               
Cow position:
               
chr17:17193613-17193402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
1110-1334
               

               
Cow position:
               
chr17:21292916-21293143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
1110-1334
               

               
Cow position:
               
chr17:30665400-30665171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1110-1347
               

               
Cow position:
               
chr17:25741073-25740840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
181, 23
               

               
Conread position:
               
1110-1347
               

               
Cow position:
               
chr17:41891933-41892176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr17:6423892-6423648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr17:11215766-11216004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr17:14248883-14249122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
194, 15
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chr17:20652783-20653006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1110-1365
               

               
Cow position:
               
chr17:3782171-3781915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
1110-1365
               

               
Cow position:
               
chr17:18720319-18720583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1110-1366
               

               
Cow position:
               
chr17:11962406-11962680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 28
               

               
Conread position:
               
1110-1372
               

               
Cow position:
               
chr17:20780643-20780374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
43, 261
               

               
Conread position:
               
1113-1296
               

               
Cow position:
               
chr17:36094128-36093943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
1113-1303
               

               
Cow position:
               
chr17:25032357-25032550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 126
               

               
Conread position:
               
1113-1304
               

               
Cow position:
               
chr17:36814486-36814292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chr17:17222465-17222231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chr17:25594566-25594816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
128, 230
               

               
Conread position:
               
1113-1349
               

               
Cow position:
               
chr17:552845-553073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
193, 73
               

               
Conread position:
               
1113-1359
               

               
Cow position:
               
chr17:25502235-25501985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
111, 51
               

               
Conread position:
               
1114-1292
               

               
Cow position:
               
chr17:22246113-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1114-1348
               

               
Cow position:
               
chr17:14761997-14762232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
1114-1353
               

               
Cow position:
               
chr17:23798405-23798164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 219
               

               
Conread position:
               
1114-1365
               

               
Cow position:
               
chr17:7142985-7142734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 139
               

               
Conread position:
               
1115-1346
               

               
Cow position:
               
chr17:10528605-10528848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
1115-1346
               

               
Cow position:
               
chr17:21434608-21434836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
1115-1349
               

               
Cow position:
               
chr17:13940199-13940434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
1116-1346
               

               
Cow position:
               
chr17:10447031-10446809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
192, 104
               

               
Conread position:
               
1118-1348
               

               
Cow position:
               
chr17:8279588-8279822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
1119-1267
               

               
Cow position:
               
chr17:32265371-32265517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1119-1319
               

               
Cow position:
               
chr17:27730662-27730457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1339
               

               
Cow position:
               
chr17:24928594-24928370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1345
               

               
Cow position:
               
chr17:37163412-37163633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr17:11381608-11381829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr17:26233711-26233937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr17:33410890-33411133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr17:36454662-36454877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chr17:38615079-38614845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1349
               

               
Cow position:
               
chr17:5398322-5398549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1362
               

               
Cow position:
               
chr17:18824905-18824663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
1120-1339
               

               
Cow position:
               
chr17:33657950-33658174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1120-1344
               

               
Cow position:
               
chr17:38647179-38646951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 152
               

               
Conread position:
               
1120-1345
               

               
Cow position:
               
chr17:27795772-27795534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1120-1346
               

               
Cow position:
               
chr17:1040863-1040635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 122
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr17:24587742-24587509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr17:29157534-29157304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chr17:39857508-39857280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
100, 133
               

               
Conread position:
               
1120-1372
               

               
Cow position:
               
chr17:25612208-25611957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
1121-1301
               

               
Cow position:
               
chr17:21478805-21478987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
1121-1334
               

               
Cow position:
               
chr17:22775491-22775272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
106, 132
               

               
Conread position:
               
1121-1340
               

               
Cow position:
               
chr17:17121788-17121570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 131
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chr17:28540145-28539916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chr17:42419826-42419610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
1121-1362
               

               
Cow position:
               
chr17:38990224-38989978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
1121-1365
               

               
Cow position:
               
chr17:21744048-21743807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
1122-1337
               

               
Cow position:
               
chr17:7693178-7692962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
1122-1339
               

               
Cow position:
               
chr17:18201873-18201655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
1122-1345
               

               
Cow position:
               
chr17:30713461-30713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
145, 118
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chr17:37481953-37482186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
150, 119
               

               
Conread position:
               
1122-1385
               

               
Cow position:
               
chr17:39771515-39771251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 121
               

               
Conread position:
               
1123-1263
               

               
Cow position:
               
chr17:7567279-7567421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1123-1326
               

               
Cow position:
               
chr17:23516827-23517033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1123-1344
               

               
Cow position:
               
chr17:32273572-32273795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1126-1348
               

               
Cow position:
               
chr17:7132327-7132564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1127-1350
               

               
Cow position:
               
chr17:26884743-26884517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
1128-1348
               

               
Cow position:
               
chr17:25541707-25541926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
1128-1349
               

               
Cow position:
               
chr17:7437277-7437056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 14
               

               
Conread position:
               
1130-1307
               

               
Cow position:
               
chr17:16616922-16616748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1130-1340
               

               
Cow position:
               
chr17:24974049-24973847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
177, 85
               

               
Conread position:
               
1130-1348
               

               
Cow position:
               
chr17:8836840-8837062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
1130-1349
               

               
Cow position:
               
chr17:21620831-21620604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
1130-1365
               

               
Cow position:
               
chr17:31231015-31231241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
177, 23
               

               
Conread position:
               
1131-1312
               

               
Cow position:
               
chr17:8598003-8598182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
1131-1332
               

               
Cow position:
               
chr17:25117991-25117793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 89
               

               
Conread position:
               
1131-1336
               

               
Cow position:
               
chr17:14652673-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
1131-1339
               

               
Cow position:
               
chr17:18490647-18490431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1131-1340
               

               
Cow position:
               
chr17:29080650-29080447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
1131-1345
               

               
Cow position:
               
chr17:11277921-11278143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1131-1345
               

               
Cow position:
               
chr17:25514016-25514232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr17:1256393-1256611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr17:12108911-12108694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr17:20889478-20889267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr17:21917766-21917987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chr17:24149291-24149070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 89
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:5144051-5144280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:5250472-5250683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
183, 54
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:5514867-5514646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:16446329-16446545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:20022407-20022630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:20032805-20033025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
115, 94
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:21414723-21414948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:21437206-21437431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:24752214-24752426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 33
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:25815711-25815491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chr17:26231061-26230830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr17:1568067-1568287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr17:18419789-18419562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 213
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chr17:20800920-20800702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
1131-1361
               

               
Cow position:
               
chr17:25616356-25616133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
176, 31
               

               
Conread position:
               
1131-1365
               

               
Cow position:
               
chr17:13922590-13922349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1131-1371
               

               
Cow position:
               
chr17:21599576-21599815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
1131-1423
               

               
Cow position:
               
chr17:14060667-14060965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
1132-1346
               

               
Cow position:
               
chr17:31701537-31701329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
175, 83
               

               
Conread position:
               
1132-1348
               

               
Cow position:
               
chr17:37342381-37342595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
1133-1264
               

               
Cow position:
               
chr17:21604518-21604386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1133-1320
               

               
Cow position:
               
chr17:34868527-34868337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
1133-1346
               

               
Cow position:
               
chr17:23063824-23063601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
1133-1347
               

               
Cow position:
               
chr17:33998941-33999156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
1133-1348
               

               
Cow position:
               
chr17:4786392-4786607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
172, 194
               

               
Conread position:
               
1133-1348
               

               
Cow position:
               
chr17:34596045-34595831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 106
               

               
Conread position:
               
1133-1348
               

               
Cow position:
               
chr17:44146869-44147085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
173, 109
               

               
Conread position:
               
1133-1349
               

               
Cow position:
               
chr17:36500907-36500691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1134-1349
               

               
Cow position:
               
chr17:15187965-15188191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1135-1324
               

               
Cow position:
               
chr17:41411726-41411918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 116
               

               
Conread position:
               
1136-1349
               

               
Cow position:
               
chr17:1020459-1020676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1140-1348
               

               
Cow position:
               
chr17:34316619-34316818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1142-1316
               

               
Cow position:
               
chr17:20335754-20335585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
1142-1347
               

               
Cow position:
               
chr17:11296745-11296527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1144-1334
               

               
Cow position:
               
chr17:5688267-5688456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
1147-1270
               

               
Cow position:
               
chr17:25485615-25485741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1147-1334
               

               
Cow position:
               
chr17:7648303-7648113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 66
               

               
Conread position:
               
1147-1348
               

               
Cow position:
               
chr17:2034620-2034425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
1148-1348
               

               
Cow position:
               
chr17:33271593-33271800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
1149-1348
               

               
Cow position:
               
chr17:25916984-25916783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
103, 87
               

               
Conread position:
               
1149-1349
               

               
Cow position:
               
chr17:40893240-40893031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
1151-1348
               

               
Cow position:
               
chr17:22564280-22564068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
1151-1349
               

               
Cow position:
               
chr17:27565208-27565008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
1152-1340
               

               
Cow position:
               
chr17:12059007-12059199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
1152-1348
               

               
Cow position:
               
chr17:6624339-6624145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
1153-1369
               

               
Cow position:
               
chr17:38362898-38363117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 189
               

               
Conread position:
               
1156-1339
               

               
Cow position:
               
chr17:15333628-15333816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1158-1348
               

               
Cow position:
               
chr17:267505-267701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
1159-1348
               

               
Cow position:
               
chr17:20839487-20839674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
1160-1347
               

               
Cow position:
               
chr17:41289944-41290132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
1161-1322
               

               
Cow position:
               
chr17:27770358-27770198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
1161-1339
               

               
Cow position:
               
chr17:17266814-17266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
1164-1312
               

               
Cow position:
               
chr17:21152430-21152280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1164-1334
               

               
Cow position:
               
chr17:17682830-17683002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
1164-1349
               

               
Cow position:
               
chr17:25608434-25608616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
1165-1338
               

               
Cow position:
               
chr17:26183301-26183116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1165-1346
               

               
Cow position:
               
chr17:1311423-1311237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1165-1348
               

               
Cow position:
               
chr17:44232639-44232828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1166-1312
               

               
Cow position:
               
chr17:1353467-1353322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
1166-1348
               

               
Cow position:
               
chr17:9778315-9778133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 64
               

               
Conread position:
               
1167-1348
               

               
Cow position:
               
chr17:23246279-23246101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
1167-1348
               

               
Cow position:
               
chr17:24550248-24550061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1168-1333
               

               
Cow position:
               
chr17:32950345-32950175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
1168-1339
               

               
Cow position:
               
chr17:24761158-24761331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1168-1349
               

               
Cow position:
               
chr17:10491596-10491413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
1171-1346
               

               
Cow position:
               
chr17:3471486-3471309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1171-1348
               

               
Cow position:
               
chr17:21910854-21911033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
1171-1366
               

               
Cow position:
               
chr17:21298299-21298093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
1172-1365
               

               
Cow position:
               
chr17:27306226-27306032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 156
               

               
Conread position:
               
1173-1365
               

               
Cow position:
               
chr17:26881268-26881463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
1175-1326
               

               
Cow position:
               
chr17:27765337-27765179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1176-1339
               

               
Cow position:
               
chr17:9079142-9079300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
1176-1349
               

               
Cow position:
               
chr17:19999199-19999025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 104
               

               
Conread position:
               
1176-1373
               

               
Cow position:
               
chr17:13143626-13143827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
44, 193
               

               
Conread position:
               
1181-1365
               

               
Cow position:
               
chr17:5246951-5246765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
1183-1348
               

               
Cow position:
               
chr17:25122353-25122521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 69
               

               
Conread position:
               
1184-1334
               

               
Cow position:
               
chr17:42347170-42347323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
1184-1336
               

               
Cow position:
               
chr17:20306104-20305947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1184-1346
               

               
Cow position:
               
chr17:242692-242525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr17:1295517-1295684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr17:20358920-20358762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 57
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr17:21031841-21031669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chr17:30734240-30734405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
1187-1337
               

               
Cow position:
               
chr17:2839960-2839806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1187-1349
               

               
Cow position:
               
chr17:33122143-33121981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 53
               

               
Conread position:
               
1188-1339
               

               
Cow position:
               
chr17:5381944-5382095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
1188-1348
               

               
Cow position:
               
chr17:35311477-35311313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1194-1339
               

               
Cow position:
               
chr17:21312765-21312914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1194-1366
               

               
Cow position:
               
chr17:11921230-11921413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1196-1348
               

               
Cow position:
               
chr17:4824531-4824383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
1196-1348
               

               
Cow position:
               
chr17:5895868-5896023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
1196-1348
               

               
Cow position:
               
chr17:15067583-15067739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1196-1365
               

               
Cow position:
               
chr17:966704-966869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
1198-1365
               

               
Cow position:
               
chr17:22781733-22781561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
1203-1339
               

               
Cow position:
               
chr17:484633-484492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1204-1348
               

               
Cow position:
               
chr17:20928946-20928801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
1212-1348
               

               
Cow position:
               
chr17:14883056-14883197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1213-1348
               

               
Cow position:
               
chr17:21697760-21697623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1215-1349
               

               
Cow position:
               
chr17:34207798-34207932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
1219-1347
               

               
Cow position:
               
chr17:21874289-21874425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1220-1338
               

               
Cow position:
               
chr17:9936023-9936140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
1220-1348
               

               
Cow position:
               
chr17:11056353-11056484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1223-1349
               

               
Cow position:
               
chr17:31231918-31232043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
1225-1348
               

               
Cow position:
               
chr17:23337005-23337126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
1227-1348
               

               
Cow position:
               
chr17:12216064-12216186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
1232-1348
               

               
Cow position:
               
chr17:21017801-21017685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1232-1348
               

               
Cow position:
               
chr17:32651624-32651503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1232-1348
               

               
Cow position:
               
chr17:38613251-38613133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
1232-1348
               

               
Cow position:
               
chr17:43634111-43633999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
1251-1347
               

               
Cow position:
               
chr17:32554039-32554134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               
Show alignments to all cow chromosomes.