Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055I03.5
        

               Conread position:
               1003-1313
               

               Cow position:
               chr3:74846537-74846850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               88, 27
               

               Conread position:
               1009-1326
               

               Cow position:
               chr3:45648304-45647977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               28, 161
               

               Conread position:
               1034-1348
               

               Cow position:
               chr3:14599093-14598773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               1038-1348
               

               Cow position:
               chr3:8394081-8393762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               1045-1348
               

               Cow position:
               chr3:6873113-6873421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               1047-1311
               

               Cow position:
               chr3:3036794-3037069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               1048-1348
               

               Cow position:
               chr3:73764069-73764373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               1051-1346
               

               Cow position:
               chr3:11712089-11711782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               1057-1303
               

               Cow position:
               chr3:61116733-61116989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               1057-1310
               

               Cow position:
               chr3:3649101-3649355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 144
               

               Conread position:
               1057-1325
               

               Cow position:
               chr3:48629469-48629748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               1057-1332
               

               Cow position:
               chr3:61322960-61322684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               1057-1346
               

               Cow position:
               chr3:4456958-4457247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               1057-1346
               

               Cow position:
               chr3:50614761-50614462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1057-1346
               

               Cow position:
               chr3:53588265-53588562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               1057-1346
               

               Cow position:
               chr3:53836572-53836860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               1057-1346
               

               Cow position:
               chr3:66707950-66708247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               1057-1348
               

               Cow position:
               chr3:15655026-15655325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               1057-1348
               

               Cow position:
               chr3:64172560-64172268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 199
               

               Conread position:
               1057-1348
               

               Cow position:
               chr3:76172544-76172837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               1057-1365
               

               Cow position:
               chr3:2199002-2198688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               1058-1311
               

               Cow position:
               chr3:60389887-60389628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 200
               

               Conread position:
               1058-1348
               

               Cow position:
               chr3:33327828-33327527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1060-1257
               

               Cow position:
               chr3:23667737-23667537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               20, 169
               

               Conread position:
               1060-1331
               

               Cow position:
               chr3:58973407-58973143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               246, 33
               

               Conread position:
               1060-1337
               

               Cow position:
               chr3:26066121-26065837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               1060-1347
               

               Cow position:
               chr3:5374446-5374161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               1060-1349
               

               Cow position:
               chr3:37186943-37186655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               1060-1370
               

               Cow position:
               chr3:54340306-54340609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               1063-1324
               

               Cow position:
               chr3:46541718-46541981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 188
               

               Conread position:
               1063-1339
               

               Cow position:
               chr3:24352972-24352692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               28, 98
               

               Conread position:
               1063-1348
               

               Cow position:
               chr3:13577087-13577363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               1063-1371
               

               Cow position:
               chr3:51146558-51146860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               1065-1349
               

               Cow position:
               chr3:59366664-59366375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               1066-1347
               

               Cow position:
               chr3:62884309-62884030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 6
               

               Conread position:
               1072-1348
               

               Cow position:
               chr3:49218203-49218492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               1075-1372
               

               Cow position:
               chr3:53270927-53270626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               1079-1303
               

               Cow position:
               chr3:7661945-7661721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               1079-1317
               

               Cow position:
               chr3:34871658-34871422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               151, 26
               

               Conread position:
               1079-1340
               

               Cow position:
               chr3:29596483-29596222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               1079-1346
               

               Cow position:
               chr3:45279559-45279289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               1083-1340
               

               Cow position:
               chr3:38347281-38347033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               1086-1348
               

               Cow position:
               chr3:4032051-4031793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               1086-1348
               

               Cow position:
               chr3:72676179-72675915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1089-1283
               

               Cow position:
               chr3:18059788-18059590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 164
               

               Conread position:
               1090-1241
               

               Cow position:
               chr3:28258177-28258027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1090-1320
               

               Cow position:
               chr3:22221411-22221170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               1090-1345
               

               Cow position:
               chr3:58764991-58765253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 157
               

               Conread position:
               1090-1348
               

               Cow position:
               chr3:15506532-15506274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               1090-1348
               

               Cow position:
               chr3:80740646-80740391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               1090-1349
               

               Cow position:
               chr3:61278992-61278730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               1093-1340
               

               Cow position:
               chr3:24935444-24935202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 10
               

               Conread position:
               1093-1348
               

               Cow position:
               chr3:58540442-58540706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               1094-1236
               

               Cow position:
               chr3:36914129-36913987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1094-1249
               

               Cow position:
               chr3:27976445-27976604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1094-1303
               

               Cow position:
               chr3:53703884-53704098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               117, 173
               

               Conread position:
               1094-1311
               

               Cow position:
               chr3:78093309-78093524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               27, 132
               

               Conread position:
               1094-1334
               

               Cow position:
               chr3:29360071-29360303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               131, 68
               

               Conread position:
               1094-1339
               

               Cow position:
               chr3:19404378-19404148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               1094-1340
               

               Cow position:
               chr3:45667265-45667520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 146
               

               Conread position:
               1094-1340
               

               Cow position:
               chr3:55970586-55970336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 40
               

               Conread position:
               1094-1340
               

               Cow position:
               chr3:71478676-71478424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               86, 241
               

               Conread position:
               1094-1343
               

               Cow position:
               chr3:49679211-49678953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               132, 250
               

               Conread position:
               1094-1346
               

               Cow position:
               chr3:56476761-56476505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               141, 174
               

               Conread position:
               1094-1347
               

               Cow position:
               chr3:12705464-12705722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               1094-1347
               

               Cow position:
               chr3:57764297-57764051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               213, 75
               

               Conread position:
               1094-1348
               

               Cow position:
               chr3:45647759-45647503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               137, 186
               

               Conread position:
               1094-1348
               

               Cow position:
               chr3:49328023-49327764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1094-1348
               

               Cow position:
               chr3:59621569-59621815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               1094-1348
               

               Cow position:
               chr3:61840354-61840101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               131, 75
               

               Conread position:
               1094-1349
               

               Cow position:
               chr3:15751634-15751900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               135, 109
               

               Conread position:
               1094-1349
               

               Cow position:
               chr3:59208874-59208636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               213, 69
               

               Conread position:
               1094-1364
               

               Cow position:
               chr3:71231474-71231204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 61
               

               Conread position:
               1094-1365
               

               Cow position:
               chr3:55318819-55319097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               1094-1372
               

               Cow position:
               chr3:6690079-6689798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               1094-1372
               

               Cow position:
               chr3:73709126-73708848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 183
               

               Conread position:
               1095-1324
               

               Cow position:
               chr3:3032485-3032251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               130, 79
               

               Conread position:
               1095-1347
               

               Cow position:
               chr3:10896901-10896656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               9, 130
               

               Conread position:
               1097-1223
               

               Cow position:
               chr3:20515742-20515868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1097-1233
               

               Cow position:
               chr3:64373080-64373215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 128
               

               Conread position:
               1097-1235
               

               Cow position:
               chr3:11229289-11229426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1097-1237
               

               Cow position:
               chr3:11292172-11292310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1097-1238
               

               Cow position:
               chr3:56704245-56704387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1097-1245
               

               Cow position:
               chr3:35074954-35074809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1097-1245
               

               Cow position:
               chr3:61467114-61467266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               126, 140
               

               Conread position:
               1097-1257
               

               Cow position:
               chr3:56949012-56949172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1097-1260
               

               Cow position:
               chr3:84250468-84250633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 64
               

               Conread position:
               1097-1267
               

               Cow position:
               chr3:75777985-75778157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1097-1271
               

               Cow position:
               chr3:81277392-81277571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1097-1274
               

               Cow position:
               chr3:75238533-75238355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1280
               

               Cow position:
               chr3:55984174-55983986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               1097-1289
               

               Cow position:
               chr3:3656590-3656393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1097-1290
               

               Cow position:
               chr3:33693895-33693699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               130, 114
               

               Conread position:
               1097-1291
               

               Cow position:
               chr3:15950837-15951031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1097-1295
               

               Cow position:
               chr3:48468249-48468059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1097-1298
               

               Cow position:
               chr3:35621377-35621176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               127, 83
               

               Conread position:
               1097-1299
               

               Cow position:
               chr3:31225508-31225312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1097-1300
               

               Cow position:
               chr3:54739811-54740017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               1097-1300
               

               Cow position:
               chr3:73299154-73298958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1097-1304
               

               Cow position:
               chr3:72342321-72342112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               110, 115
               

               Conread position:
               1097-1305
               

               Cow position:
               chr3:52017847-52017635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1097-1307
               

               Cow position:
               chr3:19711263-19711469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               1097-1309
               

               Cow position:
               chr3:84175746-84175963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               1097-1310
               

               Cow position:
               chr3:10104116-10103910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               1097-1311
               

               Cow position:
               chr3:37041495-37041275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:3889493-3889707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:11254092-11254300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:15443653-15443870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 83
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:21014880-21015100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:39873620-39873838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:48900257-48900479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:51033442-51033230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               1097-1312
               

               Cow position:
               chr3:73820293-73820511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 104
               

               Conread position:
               1097-1313
               

               Cow position:
               chr3:17058470-17058681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1097-1313
               

               Cow position:
               chr3:32457269-32457059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1097-1316
               

               Cow position:
               chr3:38783682-38783468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               210, 123
               

               Conread position:
               1097-1323
               

               Cow position:
               chr3:77582181-77581956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               1097-1326
               

               Cow position:
               chr3:10958164-10958398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               1097-1327
               

               Cow position:
               chr3:8733283-8733512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               174, 62
               

               Conread position:
               1097-1332
               

               Cow position:
               chr3:53240332-53240105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               1097-1333
               

               Cow position:
               chr3:38691330-38691571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1097-1333
               

               Cow position:
               chr3:77271202-77271435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1097-1334
               

               Cow position:
               chr3:55010089-55010329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               128, 91
               

               Conread position:
               1097-1334
               

               Cow position:
               chr3:71497062-71497307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               126, 189
               

               Conread position:
               1097-1334
               

               Cow position:
               chr3:75480075-75479839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               119, 52
               

               Conread position:
               1097-1334
               

               Cow position:
               chr3:80581731-80581500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               210, 66
               

               Conread position:
               1097-1335
               

               Cow position:
               chr3:60264640-60264879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               137, 182
               

               Conread position:
               1097-1337
               

               Cow position:
               chr3:13507544-13507300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               119, 183
               

               Conread position:
               1097-1337
               

               Cow position:
               chr3:72391158-72390916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 88
               

               Conread position:
               1097-1338
               

               Cow position:
               chr3:26920986-26920741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               1097-1338
               

               Cow position:
               chr3:30222267-30222018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               1097-1338
               

               Cow position:
               chr3:55271969-55272212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               131, 230
               

               Conread position:
               1097-1338
               

               Cow position:
               chr3:79292904-79292662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 62
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:26874666-26874422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               130, 75
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:30180162-30179912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:35299742-35299497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:48241690-48241448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:52652004-52652243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:70334619-70334872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1097-1339
               

               Cow position:
               chr3:77365214-77365467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:210395-210147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               133, 180
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:3985398-3985158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 78
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:4050269-4050023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 89
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:28908127-28908371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 177
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:29813307-29813075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 66
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:32585226-32584984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               208, 118
               

               Conread position:
               1097-1340
               

               Cow position:
               chr3:42423252-42423503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               1097-1343
               

               Cow position:
               chr3:5097283-5097031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               1097-1344
               

               Cow position:
               chr3:26904186-26903942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 64
               

               Conread position:
               1097-1344
               

               Cow position:
               chr3:31850301-31850543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               150, 67
               

               Conread position:
               1097-1345
               

               Cow position:
               chr3:3738557-3738314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               1097-1345
               

               Cow position:
               chr3:68616254-68616499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               114, 65
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:13301775-13302024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:14601628-14601888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:15228747-15229000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               209, 135
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:17934862-17935109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               133, 162
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:19585939-19585687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 62
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:20802555-20802805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               132, 64
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:37599352-37599591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:48363148-48362910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               130, 71
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:55712516-55712254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:57577772-57577523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 16
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:57624540-57624288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 197
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:57760574-57760323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 0
               

               Conread position:
               1097-1346
               

               Cow position:
               chr3:60265178-60265417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               183, 66
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:4319787-4319538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 191
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:16752183-16752429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:19792981-19792716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:23168990-23169242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               128, 84
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:50069839-50069589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 89
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:56059887-56059630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:59588586-59588343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               209, 82
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:65969243-65968982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:79884410-79884663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               144, 98
               

               Conread position:
               1097-1347
               

               Cow position:
               chr3:83815712-83815965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               131, 38
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:2216444-2216186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:2506403-2506654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:2680589-2680339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:5100696-5100944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               208, 122
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:5365753-5365494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:7678729-7678490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               209, 41
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:8393421-8393173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 34
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:9641644-9641388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               55, 148
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:14626074-14626335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:15051874-15052129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:17222064-17222321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 181
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:17447539-17447785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:17936763-17937012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 152
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:20677766-20678012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               208, 66
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:20841797-20842033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               210, 128
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:23105286-23105543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:23408282-23408528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               210, 66
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:27274604-27274354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               132, 49
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:27940067-27940305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               130, 72
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:29887344-29887599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               96, 41
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:33252813-33253058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               209, 128
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:34669657-34669905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 86
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:36375464-36375721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:38828833-38828589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               209, 21
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:45211377-45211120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:45881974-45881732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               210, 123
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:46901274-46901019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:48252961-48252707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 153
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:49650464-49650207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:51234020-51234274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               84, 89
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:52608258-52608010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               132, 178
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:53113251-53112996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:53150407-53150152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               87, 145
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:53384205-53384461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:54946207-54945951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:55109537-55109792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               123, 237
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:55189677-55189933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 206
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:55835745-55836002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:57274137-57273889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 74
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:59597254-59597008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               210, 107
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:65058774-65058525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 90
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:66883868-66884118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               131, 67
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:66900657-66900919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:67520090-67520353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               73, 242
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:67744552-67744800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:67930111-67930359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 38
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:68627613-68627858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:68648249-68647987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:70565662-70565915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:71238229-71237979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 50
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:73395192-73394943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 91
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:74134780-74134528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               114, 185
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:74234262-74234019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               210, 104
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:74502249-74502499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 144
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:75045800-75046052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 68
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:76922587-76922840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               90, 131
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:82056043-82056295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               217, 72
               

               Conread position:
               1097-1348
               

               Cow position:
               chr3:84596889-84597137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:1830500-1830747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:3556621-3556371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:14465630-14465885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:24872780-24872539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               125, 66
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:35852395-35852642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               122, 171
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:49482640-49482889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:53046587-53046837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:62046740-62046484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               93, 179
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:65413202-65413458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 143
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:80053467-80053722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 13
               

               Conread position:
               1097-1349
               

               Cow position:
               chr3:80565042-80564785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               128, 115
               

               Conread position:
               1097-1355
               

               Cow position:
               chr3:70762047-70762307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               118, 65
               

               Conread position:
               1097-1356
               

               Cow position:
               chr3:2648434-2648696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               126, 157
               

               Conread position:
               1097-1362
               

               Cow position:
               chr3:49790736-49791001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               209, 113
               

               Conread position:
               1097-1364
               

               Cow position:
               chr3:22232578-22232845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 77
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:12711839-12712113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:14263468-14263198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:14552951-14552684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               210, 173
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:18459452-18459714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               210, 115
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:34270990-34270727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               27, 73
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:55085093-55085378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:58968827-58969095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               210, 133
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:59000681-59000940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               125, 53
               

               Conread position:
               1097-1365
               

               Cow position:
               chr3:83215338-83215059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1097-1366
               

               Cow position:
               chr3:7566341-7566614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               1097-1366
               

               Cow position:
               chr3:15153767-15153497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               123, 155
               

               Conread position:
               1097-1366
               

               Cow position:
               chr3:53875689-53875954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               209, 140
               

               Conread position:
               1097-1367
               

               Cow position:
               chr3:76267899-76268178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 237
               

               Conread position:
               1097-1369
               

               Cow position:
               chr3:116266-115999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               1097-1369
               

               Cow position:
               chr3:18686982-18686709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               1097-1369
               

               Cow position:
               chr3:54100650-54100920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 122
               

               Conread position:
               1097-1373
               

               Cow position:
               chr3:18067208-18066933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               1097-1373
               

               Cow position:
               chr3:81471020-81471302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               134, 155
               

               Conread position:
               1097-1381
               

               Cow position:
               chr3:5366844-5366561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               132, 60
               

               Conread position:
               1098-1312
               

               Cow position:
               chr3:1517437-1517655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 153
               

               Conread position:
               1098-1312
               

               Cow position:
               chr3:71238544-71238333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               1098-1329
               

               Cow position:
               chr3:59691963-59691740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 55
               

               Conread position:
               1098-1333
               

               Cow position:
               chr3:16333874-16333638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 127
               

               Conread position:
               1098-1339
               

               Cow position:
               chr3:9663097-9663340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               122, 141
               

               Conread position:
               1098-1340
               

               Cow position:
               chr3:48810570-48810806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 127
               

               Conread position:
               1098-1343
               

               Cow position:
               chr3:23920354-23920602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1098-1346
               

               Cow position:
               chr3:3638253-3638011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 81
               

               Conread position:
               1098-1346
               

               Cow position:
               chr3:44102042-44101794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               1098-1346
               

               Cow position:
               chr3:65237099-65236848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               138, 127
               

               Conread position:
               1098-1346
               

               Cow position:
               chr3:70401971-70401727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 64
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:8061201-8060950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               127, 65
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:18393319-18393565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:23471384-23471641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               126, 182
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:23877075-23876817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:76387532-76387773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:80072204-80071949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1098-1348
               

               Cow position:
               chr3:83491160-83490906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               131, 37
               

               Conread position:
               1098-1349
               

               Cow position:
               chr3:27545744-27546012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               135, 103
               

               Conread position:
               1098-1349
               

               Cow position:
               chr3:63316206-63315957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               1098-1349
               

               Cow position:
               chr3:67704621-67704364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1098-1367
               

               Cow position:
               chr3:35153692-35153426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               136, 171
               

               Conread position:
               1099-1317
               

               Cow position:
               chr3:61144168-61143954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               130, 64
               

               Conread position:
               1099-1337
               

               Cow position:
               chr3:12674969-12675201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               207, 125
               

               Conread position:
               1099-1340
               

               Cow position:
               chr3:59630439-59630671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               134, 70
               

               Conread position:
               1099-1343
               

               Cow position:
               chr3:53739111-53739358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1099-1348
               

               Cow position:
               chr3:15684848-15685091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               154, 34
               

               Conread position:
               1099-1348
               

               Cow position:
               chr3:27532581-27532835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               115, 33
               

               Conread position:
               1099-1348
               

               Cow position:
               chr3:36671921-36672176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               206, 49
               

               Conread position:
               1099-1348
               

               Cow position:
               chr3:82461253-82461002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               1099-1349
               

               Cow position:
               chr3:20674803-20675053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               1099-1349
               

               Cow position:
               chr3:36569973-36570224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               124, 11
               

               Conread position:
               1099-1365
               

               Cow position:
               chr3:7940483-7940750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               128, 65
               

               Conread position:
               1100-1304
               

               Cow position:
               chr3:22510098-22509894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               125, 29
               

               Conread position:
               1100-1315
               

               Cow position:
               chr3:20993886-20993667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               134, 101
               

               Conread position:
               1100-1348
               

               Cow position:
               chr3:78896720-78896472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 163
               

               Conread position:
               1102-1323
               

               Cow position:
               chr3:70333894-70334117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               107, 101
               

               Conread position:
               1103-1289
               

               Cow position:
               chr3:58317878-58318071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1103-1312
               

               Cow position:
               chr3:80468608-80468816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               1103-1334
               

               Cow position:
               chr3:60597611-60597379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               121, 60
               

               Conread position:
               1103-1346
               

               Cow position:
               chr3:71161870-71161619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               1106-1348
               

               Cow position:
               chr3:55124213-55124455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               113, 179
               

               Conread position:
               1107-1349
               

               Cow position:
               chr3:69750643-69750879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               1108-1348
               

               Cow position:
               chr3:64536496-64536724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1108-1348
               

               Cow position:
               chr3:73467697-73467445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               1109-1233
               

               Cow position:
               chr3:22871779-22871902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1109-1348
               

               Cow position:
               chr3:75711370-75711134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 109
               

               Conread position:
               1110-1329
               

               Cow position:
               chr3:19793528-19793751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               1110-1335
               

               Cow position:
               chr3:59884006-59884237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               1110-1338
               

               Cow position:
               chr3:17895911-17895679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               64, 15
               

               Conread position:
               1110-1346
               

               Cow position:
               chr3:63269286-63269050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 220
               

               Conread position:
               1110-1347
               

               Cow position:
               chr3:70896111-70895874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               1110-1348
               

               Cow position:
               chr3:23444825-23445071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               98, 159
               

               Conread position:
               1110-1348
               

               Cow position:
               chr3:39969799-39970045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1110-1348
               

               Cow position:
               chr3:64280867-64281109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               1110-1348
               

               Cow position:
               chr3:68881058-68881289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               193, 63
               

               Conread position:
               1110-1349
               

               Cow position:
               chr3:52863121-52863363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               1110-1361
               

               Cow position:
               chr3:26218988-26219238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               110, 133
               

               Conread position:
               1110-1365
               

               Cow position:
               chr3:76015355-76015100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 139
               

               Conread position:
               1110-1373
               

               Cow position:
               chr3:42367451-42367700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               1111-1334
               

               Cow position:
               chr3:12978554-12978780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 93
               

               Conread position:
               1113-1270
               

               Cow position:
               chr3:45897669-45897507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 111
               

               Conread position:
               1113-1270
               

               Cow position:
               chr3:45972387-45972549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 111
               

               Conread position:
               1113-1280
               

               Cow position:
               chr3:65019805-65019974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               1113-1285
               

               Cow position:
               chr3:72503836-72504012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1113-1301
               

               Cow position:
               chr3:35055914-35056108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1113-1325
               

               Cow position:
               chr3:24468325-24468533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               96, 63
               

               Conread position:
               1113-1336
               

               Cow position:
               chr3:42480678-42480456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               1113-1337
               

               Cow position:
               chr3:56317-56541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               1113-1340
               

               Cow position:
               chr3:2392908-2393134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               1113-1346
               

               Cow position:
               chr3:20437596-20437825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               1113-1346
               

               Cow position:
               chr3:48296758-48296534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               196, 50
               

               Conread position:
               1113-1346
               

               Cow position:
               chr3:53910168-53909938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               193, 75
               

               Conread position:
               1113-1347
               

               Cow position:
               chr3:31309294-31309531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               1113-1348
               

               Cow position:
               chr3:2675089-2674852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               110, 218
               

               Conread position:
               1113-1348
               

               Cow position:
               chr3:23091916-23092156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               1113-1348
               

               Cow position:
               chr3:26553655-26553893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               111, 87
               

               Conread position:
               1113-1348
               

               Cow position:
               chr3:72131238-72131476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               1113-1349
               

               Cow position:
               chr3:55778096-55777859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               1113-1365
               

               Cow position:
               chr3:72489-72220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1113-1365
               

               Cow position:
               chr3:28898163-28898417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               1114-1249
               

               Cow position:
               chr3:45222092-45222233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1118-1342
               

               Cow position:
               chr3:188927-188689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               1119-1298
               

               Cow position:
               chr3:58134632-58134814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1309
               

               Cow position:
               chr3:64526902-64526710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1316
               

               Cow position:
               chr3:15954031-15954232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1344
               

               Cow position:
               chr3:31419746-31419527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1345
               

               Cow position:
               chr3:67929206-67929438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:5044759-5044981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               188, 105
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:8591318-8591533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               188, 51
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:18144064-18144292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:20129989-20129767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:25690847-25690614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:27289994-27289763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:31206930-31206697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:31298109-31298331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               188, 57
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:39661403-39661628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:49460872-49461108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:57754422-57754655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:74088126-74088345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               188, 31
               

               Conread position:
               1119-1346
               

               Cow position:
               chr3:81507057-81507287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1348
               

               Cow position:
               chr3:13890531-13890290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1348
               

               Cow position:
               chr3:26982112-26981887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1119-1348
               

               Cow position:
               chr3:74878535-74878767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 223
               

               Conread position:
               1119-1349
               

               Cow position:
               chr3:54903618-54903394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               187, 64
               

               Conread position:
               1119-1358
               

               Cow position:
               chr3:59035094-59034848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               1120-1301
               

               Cow position:
               chr3:48459276-48459465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1120-1337
               

               Cow position:
               chr3:31771736-31771530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               1120-1341
               

               Cow position:
               chr3:59474175-59473951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               107, 153
               

               Conread position:
               1120-1346
               

               Cow position:
               chr3:39171433-39171658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               1120-1347
               

               Cow position:
               chr3:25477855-25477640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1120-1347
               

               Cow position:
               chr3:66609791-66610019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 56
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:11063420-11063205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               187, 43
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:26970866-26970650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               185, 87
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:31046899-31047128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:34556187-34556415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:53790484-53790714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:66292123-66292356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:68707960-68708181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               184, 50
               

               Conread position:
               1120-1348
               

               Cow position:
               chr3:72019169-72018938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               108, 43
               

               Conread position:
               1120-1349
               

               Cow position:
               chr3:14632930-14633162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               113, 174
               

               Conread position:
               1120-1355
               

               Cow position:
               chr3:54781950-54782201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               1120-1369
               

               Cow position:
               chr3:54506760-54506513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               122, 129
               

               Conread position:
               1121-1312
               

               Cow position:
               chr3:59040621-59040426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               108, 98
               

               Conread position:
               1121-1323
               

               Cow position:
               chr3:55177694-55177905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1121-1325
               

               Cow position:
               chr3:17134386-17134183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               91, 80
               

               Conread position:
               1121-1334
               

               Cow position:
               chr3:76713273-76713489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               1121-1339
               

               Cow position:
               chr3:70899943-70899727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               1121-1342
               

               Cow position:
               chr3:32787512-32787289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 103
               

               Conread position:
               1121-1345
               

               Cow position:
               chr3:59799300-59799073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1121-1345
               

               Cow position:
               chr3:80818769-80818554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               185, 122
               

               Conread position:
               1121-1346
               

               Cow position:
               chr3:65800637-65800420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               104, 42
               

               Conread position:
               1121-1347
               

               Cow position:
               chr3:50768731-50768506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               185, 115
               

               Conread position:
               1121-1348
               

               Cow position:
               chr3:49139997-49140219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               1121-1348
               

               Cow position:
               chr3:75853276-75853508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               1121-1348
               

               Cow position:
               chr3:81359055-81359290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               107, 129
               

               Conread position:
               1121-1365
               

               Cow position:
               chr3:30463120-30463360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               185, 67
               

               Conread position:
               1122-1344
               

               Cow position:
               chr3:24615795-24616010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1122-1346
               

               Cow position:
               chr3:3913391-3913626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1122-1348
               

               Cow position:
               chr3:43233557-43233330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               107, 129
               

               Conread position:
               1122-1348
               

               Cow position:
               chr3:62826568-62826796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               48, 26
               

               Conread position:
               1122-1349
               

               Cow position:
               chr3:22089226-22089457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 30
               

               Conread position:
               1122-1349
               

               Cow position:
               chr3:54373809-54374039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               1122-1349
               

               Cow position:
               chr3:59649309-59649076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1122-1349
               

               Cow position:
               chr3:74079586-74079817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               1123-1348
               

               Cow position:
               chr3:53222063-53221837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               53, 96
               

               Conread position:
               1127-1343
               

               Cow position:
               chr3:54771052-54770837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               1127-1346
               

               Cow position:
               chr3:55947625-55947404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 5
               

               Conread position:
               1127-1348
               

               Cow position:
               chr3:19708062-19708282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               101, 42
               

               Conread position:
               1128-1297
               

               Cow position:
               chr3:16929071-16928904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 41
               

               Conread position:
               1128-1347
               

               Cow position:
               chr3:75687392-75687615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1128-1348
               

               Cow position:
               chr3:71430159-71430385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1129-1348
               

               Cow position:
               chr3:22820615-22820391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               1130-1326
               

               Cow position:
               chr3:79645393-79645599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1130-1327
               

               Cow position:
               chr3:17235168-17235364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 97
               

               Conread position:
               1130-1334
               

               Cow position:
               chr3:81087597-81087785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               1130-1346
               

               Cow position:
               chr3:54435019-54434800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               98, 55
               

               Conread position:
               1130-1346
               

               Cow position:
               chr3:55819801-55819572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1130-1348
               

               Cow position:
               chr3:10347394-10347178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               99, 33
               

               Conread position:
               1130-1348
               

               Cow position:
               chr3:46350714-46350486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               1130-1348
               

               Cow position:
               chr3:73759474-73759693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               1130-1348
               

               Cow position:
               chr3:78945799-78946010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               1130-1348
               

               Cow position:
               chr3:83921227-83921025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               1131-1259
               

               Cow position:
               chr3:74900598-74900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1131-1316
               

               Cow position:
               chr3:43727121-43726931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               92, 160
               

               Conread position:
               1131-1326
               

               Cow position:
               chr3:29946429-29946239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               175, 89
               

               Conread position:
               1131-1339
               

               Cow position:
               chr3:77188480-77188269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1131-1340
               

               Cow position:
               chr3:11987371-11987158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1131-1340
               

               Cow position:
               chr3:68145801-68146012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               97, 111
               

               Conread position:
               1131-1342
               

               Cow position:
               chr3:27696936-27697150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               95, 111
               

               Conread position:
               1131-1344
               

               Cow position:
               chr3:38035548-38035763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 200
               

               Conread position:
               1131-1344
               

               Cow position:
               chr3:48851928-48852137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               176, 92
               

               Conread position:
               1131-1345
               

               Cow position:
               chr3:15388261-15388041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               55, 126
               

               Conread position:
               1131-1345
               

               Cow position:
               chr3:69144735-69144530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               160, 55
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:2036347-2036123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:17957509-17957287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:25945135-25944906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:51578279-51578495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 107
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:53318443-53318228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               175, 89
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:53592647-53592872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:55434371-55434156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:61857548-61857325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:68582957-68583178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               28, 118
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:72777280-72777070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               145, 88
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:79092350-79092570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:79220900-79220675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:79591849-79592060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               176, 94
               

               Conread position:
               1131-1346
               

               Cow position:
               chr3:79902538-79902328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 89
               

               Conread position:
               1131-1347
               

               Cow position:
               chr3:26960546-26960767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1131-1348
               

               Cow position:
               chr3:78077227-78077016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               176, 100
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:18185117-18184892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:29891367-29891592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:53572710-53572931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:67543827-67544047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 76
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:69416739-69416962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:72473957-72473733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1131-1349
               

               Cow position:
               chr3:74119387-74119620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1131-1362
               

               Cow position:
               chr3:81039706-81039932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               175, 94
               

               Conread position:
               1131-1364
               

               Cow position:
               chr3:68587064-68586829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               94, 26
               

               Conread position:
               1131-1365
               

               Cow position:
               chr3:21547058-21547292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 93
               

               Conread position:
               1131-1365
               

               Cow position:
               chr3:67698318-67698085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               176, 64
               

               Conread position:
               1131-1375
               

               Cow position:
               chr3:34937886-34937637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               1131-1375
               

               Cow position:
               chr3:58960546-58960794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               1131-1393
               

               Cow position:
               chr3:60933459-60933193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               105, 93
               

               Conread position:
               1131-1401
               

               Cow position:
               chr3:26489038-26489321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               93, 250
               

               Conread position:
               1132-1349
               

               Cow position:
               chr3:56612408-56612181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1132-1349
               

               Cow position:
               chr3:59718889-59718664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               47, 115
               

               Conread position:
               1133-1347
               

               Cow position:
               chr3:61894127-61894350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               1133-1349
               

               Cow position:
               chr3:83797794-83798017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               79, 94
               

               Conread position:
               1133-1372
               

               Cow position:
               chr3:61171467-61171710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               1134-1325
               

               Cow position:
               chr3:32183979-32184175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1134-1346
               

               Cow position:
               chr3:53094892-53095111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               1135-1346
               

               Cow position:
               chr3:75727543-75727760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1135-1348
               

               Cow position:
               chr3:33698769-33698548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1135-1372
               

               Cow position:
               chr3:83699830-83700070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               112, 66
               

               Conread position:
               1136-1348
               

               Cow position:
               chr3:63332855-63332637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 93
               

               Conread position:
               1137-1339
               

               Cow position:
               chr3:15992755-15992546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1137-1346
               

               Cow position:
               chr3:36446682-36446892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               1137-1348
               

               Cow position:
               chr3:15752605-15752808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               1137-1348
               

               Cow position:
               chr3:44932552-44932335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1137-1348
               

               Cow position:
               chr3:75158397-75158182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               88, 75
               

               Conread position:
               1137-1348
               

               Cow position:
               chr3:76138507-76138302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               169, 45
               

               Conread position:
               1138-1309
               

               Cow position:
               chr3:76024544-76024381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               1139-1313
               

               Cow position:
               chr3:50328589-50328751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               168, 24
               

               Conread position:
               1140-1339
               

               Cow position:
               chr3:5416187-5416389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               96, 84
               

               Conread position:
               1140-1344
               

               Cow position:
               chr3:35005809-35005608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               1140-1346
               

               Cow position:
               chr3:75570419-75570623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               91, 79
               

               Conread position:
               1140-1348
               

               Cow position:
               chr3:43528199-43528414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 165
               

               Conread position:
               1142-1329
               

               Cow position:
               chr3:63179888-63179702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 84
               

               Conread position:
               1147-1339
               

               Cow position:
               chr3:39328426-39328227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               75, 197
               

               Conread position:
               1147-1346
               

               Cow position:
               chr3:13899421-13899624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 96
               

               Conread position:
               1147-1348
               

               Cow position:
               chr3:55106413-55106616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               81, 93
               

               Conread position:
               1147-1348
               

               Cow position:
               chr3:60892651-60892455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               1147-1348
               

               Cow position:
               chr3:70632047-70631841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               1148-1312
               

               Cow position:
               chr3:80953673-80953506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1148-1348
               

               Cow position:
               chr3:16656470-16656654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               159, 21
               

               Conread position:
               1149-1348
               

               Cow position:
               chr3:83201500-83201701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               12, 105
               

               Conread position:
               1150-1348
               

               Cow position:
               chr3:29807486-29807289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               1151-1345
               

               Cow position:
               chr3:45524289-45524089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               1151-1346
               

               Cow position:
               chr3:66375342-66375141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               82, 67
               

               Conread position:
               1151-1348
               

               Cow position:
               chr3:74500265-74500051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               1153-1349
               

               Cow position:
               chr3:8717262-8717071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               1154-1339
               

               Cow position:
               chr3:12287248-12287067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               1154-1377
               

               Cow position:
               chr3:26739395-26739625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 213
               

               Conread position:
               1155-1348
               

               Cow position:
               chr3:69961700-69961888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               1155-1369
               

               Cow position:
               chr3:41328459-41328248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               194, 19
               

               Conread position:
               1156-1348
               

               Cow position:
               chr3:52650510-52650708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 65
               

               Conread position:
               1156-1361
               

               Cow position:
               chr3:78647524-78647314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               1157-1343
               

               Cow position:
               chr3:59333787-59333599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 119
               

               Conread position:
               1161-1324
               

               Cow position:
               chr3:9638361-9638522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               1163-1312
               

               Cow position:
               chr3:27544325-27544473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               144, 21
               

               Conread position:
               1163-1334
               

               Cow position:
               chr3:80081803-80081986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               1164-1305
               

               Cow position:
               chr3:54551873-54552014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               1164-1339
               

               Cow position:
               chr3:23037611-23037798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1164-1348
               

               Cow position:
               chr3:8147658-8147846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               1164-1348
               

               Cow position:
               chr3:69849498-69849683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               1164-1369
               

               Cow position:
               chr3:71247034-71246829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 100
               

               Conread position:
               1164-1372
               

               Cow position:
               chr3:42178166-42177958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 32
               

               Conread position:
               1165-1320
               

               Cow position:
               chr3:28323186-28323036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               1166-1348
               

               Cow position:
               chr3:49231024-49230837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               1166-1352
               

               Cow position:
               chr3:59515111-59514923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               1171-1348
               

               Cow position:
               chr3:16362733-16362911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 167
               

               Conread position:
               1171-1348
               

               Cow position:
               chr3:18763892-18763716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 39
               

               Conread position:
               1171-1365
               

               Cow position:
               chr3:21693953-21693751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               1171-1365
               

               Cow position:
               chr3:84000615-84000418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1172-1348
               

               Cow position:
               chr3:9843588-9843410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               1172-1348
               

               Cow position:
               chr3:15859665-15859844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               1173-1313
               

               Cow position:
               chr3:78894325-78894464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               1173-1342
               

               Cow position:
               chr3:48578840-48578665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               1174-1326
               

               Cow position:
               chr3:18056438-18056288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               133, 38
               

               Conread position:
               1175-1349
               

               Cow position:
               chr3:11020116-11019942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               132, 48
               

               Conread position:
               1176-1317
               

               Cow position:
               chr3:11198786-11198921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1176-1340
               

               Cow position:
               chr3:53192429-53192591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               53, 86
               

               Conread position:
               1176-1348
               

               Cow position:
               chr3:28692432-28692611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               48, 80
               

               Conread position:
               1176-1352
               

               Cow position:
               chr3:27108910-27109081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               1176-1361
               

               Cow position:
               chr3:15232028-15231841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 175
               

               Conread position:
               1177-1335
               

               Cow position:
               chr3:44622890-44623049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1177-1340
               

               Cow position:
               chr3:57553852-57554018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 158
               

               Conread position:
               1177-1348
               

               Cow position:
               chr3:42483904-42483723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1177-1348
               

               Cow position:
               chr3:48269861-48269690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 104
               

               Conread position:
               1179-1348
               

               Cow position:
               chr3:78201261-78201094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               50, 5
               

               Conread position:
               1179-1372
               

               Cow position:
               chr3:28675980-28675788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               69, 5
               

               Conread position:
               1180-1348
               

               Cow position:
               chr3:25060073-25059900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               1181-1339
               

               Cow position:
               chr3:522692-522540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 19
               

               Conread position:
               1181-1346
               

               Cow position:
               chr3:35975116-35975282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1183-1310
               

               Cow position:
               chr3:76169294-76169424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1184-1331
               

               Cow position:
               chr3:82657098-82657248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               113, 56
               

               Conread position:
               1184-1347
               

               Cow position:
               chr3:21050848-21051016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1184-1347
               

               Cow position:
               chr3:41366991-41367160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 130
               

               Conread position:
               1184-1348
               

               Cow position:
               chr3:61024312-61024481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 143
               

               Conread position:
               1184-1348
               

               Cow position:
               chr3:63860900-63861074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 84
               

               Conread position:
               1184-1350
               

               Cow position:
               chr3:83707984-83708150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               1184-1355
               

               Cow position:
               chr3:59271532-59271357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1186-1340
               

               Cow position:
               chr3:49731650-49731810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 150
               

               Conread position:
               1186-1348
               

               Cow position:
               chr3:67161931-67161763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1187-1348
               

               Cow position:
               chr3:3062554-3062379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               1187-1348
               

               Cow position:
               chr3:83934496-83934341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               1188-1333
               

               Cow position:
               chr3:27247204-27247351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 142
               

               Conread position:
               1189-1326
               

               Cow position:
               chr3:30907359-30907503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               1189-1340
               

               Cow position:
               chr3:5899809-5899652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               1189-1348
               

               Cow position:
               chr3:27212348-27212185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               38, 155
               

               Conread position:
               1190-1348
               

               Cow position:
               chr3:44534776-44534944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1191-1337
               

               Cow position:
               chr3:81401324-81401470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               1191-1365
               

               Cow position:
               chr3:65381132-65380959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               1192-1310
               

               Cow position:
               chr3:75152054-75152174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1192-1349
               

               Cow position:
               chr3:4087178-4087346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1194-1305
               

               Cow position:
               chr3:30701289-30701173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1194-1339
               

               Cow position:
               chr3:17952637-17952487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               1194-1348
               

               Cow position:
               chr3:25691730-25691576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 29
               

               Conread position:
               1194-1348
               

               Cow position:
               chr3:73590015-73590176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1194-1348
               

               Cow position:
               chr3:77496808-77496644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1194-1365
               

               Cow position:
               chr3:3164516-3164690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1195-1321
               

               Cow position:
               chr3:6900607-6900482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               1196-1322
               

               Cow position:
               chr3:11043701-11043569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1196-1347
               

               Cow position:
               chr3:8604041-8604190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               108, 24
               

               Conread position:
               1196-1349
               

               Cow position:
               chr3:47284813-47284657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               1196-1349
               

               Cow position:
               chr3:55062894-55063046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               110, 40
               

               Conread position:
               1203-1334
               

               Cow position:
               chr3:15661731-15661866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1205-1339
               

               Cow position:
               chr3:20779781-20779911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 78
               

               Conread position:
               1206-1339
               

               Cow position:
               chr3:82360010-82359876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 58
               

               Conread position:
               1206-1345
               

               Cow position:
               chr3:40006349-40006208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               1208-1348
               

               Cow position:
               chr3:27286195-27286052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               99, 32
               

               Conread position:
               1212-1349
               

               Cow position:
               chr3:7408449-7408309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1212-1356
               

               Cow position:
               chr3:49455199-49455052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1217-1348
               

               Cow position:
               chr3:36418511-36418643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               1220-1348
               

               Cow position:
               chr3:45307885-45307761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1220-1349
               

               Cow position:
               chr3:70609574-70609448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 11
               

               Conread position:
               1223-1348
               

               Cow position:
               chr3:10173184-10173308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1228-1339
               

               Cow position:
               chr3:78739799-78739688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 74
               

               Conread position:
               1232-1348
               

               Cow position:
               chr3:22872107-22872229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1232-1365
               

               Cow position:
               chr3:16891238-16891104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               1240-1350
               

               Cow position:
               chr3:61361338-61361224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1245-1340
               

               Cow position:
               chr3:55971153-55971057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1245-1346
               

               Cow position:
               chr3:18855022-18854917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1245-1348
               

               Cow position:
               chr3:56704617-56704721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1251-1349
               

               Cow position:
               chr3:35074604-35074505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1254-1348
               

               Cow position:
               chr3:61467525-61467432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 26
               
Show alignments to all cow chromosomes.
Conread position:	1003-1313
Cow position:	chr3:74846537-74846850 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	221
Alignm E-value:	6e-35
Alignm gaps (pig, cow):	88, 27
Conread position:	1009-1326
Cow position:	chr3:45648304-45647977 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	231
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	28, 161
Conread position:	1034-1348
Cow position:	chr3:14599093-14598773 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	229
Alignm E-value:	8e-38
Alignm gaps (pig, cow):	21, 66
Conread position:	1038-1348
Cow position:	chr3:8394081-8393762 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	226
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	20, 56
Conread position:	1045-1348
Cow position:	chr3:6873113-6873421 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	221
Alignm E-value:	8e-28
Alignm gaps (pig, cow):	58, 129
Conread position:	1047-1311
Cow position:	chr3:3036794-3037069 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	185
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	42, 18
Conread position:	1048-1348
Cow position:	chr3:73764069-73764373 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	233
Alignm E-value:	0
Alignm gaps (pig, cow):	33, 17
Conread position:	1051-1346
Cow position:	chr3:11712089-11711782 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 56
Conread position:	1057-1303
Cow position:	chr3:61116733-61116989 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	174
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	33, 0
Conread position:	1057-1310
Cow position:	chr3:3649101-3649355 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	189
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	35, 144
Conread position:	1057-1325
Cow position:	chr3:48629469-48629748 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	187
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	28, 80
Conread position:	1057-1332
Cow position:	chr3:61322960-61322684 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	192
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	29, 80
Conread position:	1057-1346
Cow position:	chr3:4456958-4457247 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	194
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	64, 25
Conread position:	1057-1348
Cow position:	chr3:15655026-15655325 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	204
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	33, 155
Conread position:	1057-1365
Cow position:	chr3:2199002-2198688 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	213
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	34, 75
Conread position:	1058-1311
Cow position:	chr3:60389887-60389628 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	184
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	33, 200
Conread position:	1058-1348
Cow position:	chr3:33327828-33327527 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	201
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	34, 0
Conread position:	1060-1257
Cow position:	chr3:23667737-23667537 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	144
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	20, 169
Conread position:	1060-1331
Cow position:	chr3:58973407-58973143 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	185
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	246, 33
Conread position:	1060-1337
Cow position:	chr3:26066121-26065837 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	193
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	36, 126