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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055I03.5
        

               
Conread position:
               
1014-1286
               

               
Cow position:
               
chrX:43426510-43426227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
1024-1348
               

               
Cow position:
               
chrX:22387049-22387370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
1031-1348
               

               
Cow position:
               
chrX:1503522-1503211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 16
               

               
Conread position:
               
1044-1348
               

               
Cow position:
               
chrX:29121224-29120919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 16
               

               
Conread position:
               
1056-1344
               

               
Cow position:
               
chrX:37119767-37119473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
1057-1227
               

               
Cow position:
               
chrX:38722288-38722118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
1057-1309
               

               
Cow position:
               
chrX:20881770-20882025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
1057-1333
               

               
Cow position:
               
chrX:39558188-39558462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
168, 13
               

               
Conread position:
               
1057-1340
               

               
Cow position:
               
chrX:5637988-5638284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 248
               

               
Conread position:
               
1057-1344
               

               
Cow position:
               
chrX:43779674-43779973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1057-1347
               

               
Cow position:
               
chrX:25338358-25338057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chrX:1499845-1499538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 229
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chrX:17630630-17630930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 248
               

               
Conread position:
               
1057-1348
               

               
Cow position:
               
chrX:42011452-42011156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 238
               

               
Conread position:
               
1058-1325
               

               
Cow position:
               
chrX:37575006-37574747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
247, 153
               

               
Conread position:
               
1060-1300
               

               
Cow position:
               
chrX:4152856-4153113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1060-1332
               

               
Cow position:
               
chrX:23939886-23940136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
1060-1336
               

               
Cow position:
               
chrX:2301092-2300812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
1060-1346
               

               
Cow position:
               
chrX:32431792-32431502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 238
               

               
Conread position:
               
1060-1347
               

               
Cow position:
               
chrX:20584500-20584197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1060-1348
               

               
Cow position:
               
chrX:10959228-10959524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1060-1392
               

               
Cow position:
               
chrX:25388078-25388403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 78
               

               
Conread position:
               
1061-1348
               

               
Cow position:
               
chrX:6234295-6234580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
1063-1347
               

               
Cow position:
               
chrX:39126491-39126207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
1063-1370
               

               
Cow position:
               
chrX:11856587-11856279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
1064-1229
               

               
Cow position:
               
chrX:24054843-24054666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1064-1346
               

               
Cow position:
               
chrX:17662437-17662718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
1064-1348
               

               
Cow position:
               
chrX:8925864-8925574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1065-1346
               

               
Cow position:
               
chrX:11938770-11939052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 199
               

               
Conread position:
               
1065-1346
               

               
Cow position:
               
chrX:35224459-35224171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
23, 273
               

               
Conread position:
               
1065-1349
               

               
Cow position:
               
chrX:755126-754834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
31, 278
               

               
Conread position:
               
1075-1348
               

               
Cow position:
               
chrX:45993377-45993096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
1079-1301
               

               
Cow position:
               
chrX:23562776-23562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
1079-1309
               

               
Cow position:
               
chrX:40680758-40680523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
1079-1312
               

               
Cow position:
               
chrX:29050392-29050156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
1079-1317
               

               
Cow position:
               
chrX:34836918-34837150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
1079-1344
               

               
Cow position:
               
chrX:30922315-30922060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
1087-1346
               

               
Cow position:
               
chrX:47481934-47481675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
1088-1347
               

               
Cow position:
               
chrX:15007013-15007276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1089-1348
               

               
Cow position:
               
chrX:42171161-42171423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
131, 41
               

               
Conread position:
               
1090-1227
               

               
Cow position:
               
chrX:35276120-35275983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
1090-1337
               

               
Cow position:
               
chrX:44656822-44657079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
1090-1348
               

               
Cow position:
               
chrX:46532360-46532633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1091-1369
               

               
Cow position:
               
chrX:35413743-35413475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
176, 77
               

               
Conread position:
               
1094-1293
               

               
Cow position:
               
chrX:32977955-32978148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1094-1313
               

               
Cow position:
               
chrX:161542-161321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
135, 155
               

               
Conread position:
               
1094-1320
               

               
Cow position:
               
chrX:10516383-10516157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
126, 183
               

               
Conread position:
               
1094-1336
               

               
Cow position:
               
chrX:6265469-6265712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
1094-1339
               

               
Cow position:
               
chrX:34532650-34532403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 171
               

               
Conread position:
               
1094-1340
               

               
Cow position:
               
chrX:5679441-5679685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
1094-1346
               

               
Cow position:
               
chrX:7695879-7695623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chrX:5017291-5017541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chrX:13382455-13382202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chrX:14599663-14599406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
1094-1348
               

               
Cow position:
               
chrX:38006640-38006891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
1094-1349
               

               
Cow position:
               
chrX:9365545-9365803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 154
               

               
Conread position:
               
1094-1350
               

               
Cow position:
               
chrX:9635061-9635310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
213, 70
               

               
Conread position:
               
1094-1365
               

               
Cow position:
               
chrX:34543915-34543642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
14, 168
               

               
Conread position:
               
1094-1369
               

               
Cow position:
               
chrX:34565414-34565135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 53
               

               
Conread position:
               
1094-1373
               

               
Cow position:
               
chrX:44397139-44396870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1095-1346
               

               
Cow position:
               
chrX:7572035-7571779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1096-1367
               

               
Cow position:
               
chrX:11084936-11085203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 42
               

               
Conread position:
               
1097-1228
               

               
Cow position:
               
chrX:31829334-31829463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1097-1234
               

               
Cow position:
               
chrX:42894053-42893916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
1097-1235
               

               
Cow position:
               
chrX:3806809-3806670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1242
               

               
Cow position:
               
chrX:42449887-42450035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1097-1242
               

               
Cow position:
               
chrX:42836308-42836164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1097-1249
               

               
Cow position:
               
chrX:20743731-20743575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1255
               

               
Cow position:
               
chrX:11653897-11653733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1097-1257
               

               
Cow position:
               
chrX:17956817-17956660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1097-1258
               

               
Cow position:
               
chrX:23188657-23188813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1097-1261
               

               
Cow position:
               
chrX:27074924-27075086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1264
               

               
Cow position:
               
chrX:29553412-29553243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 155
               

               
Conread position:
               
1097-1267
               

               
Cow position:
               
chrX:4645786-4645957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1277
               

               
Cow position:
               
chrX:44339198-44339379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1279
               

               
Cow position:
               
chrX:19469379-19469563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1097-1279
               

               
Cow position:
               
chrX:31626851-31627038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
1097-1282
               

               
Cow position:
               
chrX:13359302-13359480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
181, 89
               

               
Conread position:
               
1097-1282
               

               
Cow position:
               
chrX:21665114-21665299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
136, 170
               

               
Conread position:
               
1097-1282
               

               
Cow position:
               
chrX:39352912-39352720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
113, 62
               

               
Conread position:
               
1097-1284
               

               
Cow position:
               
chrX:4109311-4109128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 104
               

               
Conread position:
               
1097-1287
               

               
Cow position:
               
chrX:48558873-48558683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 180
               

               
Conread position:
               
1097-1291
               

               
Cow position:
               
chrX:19097092-19097291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
1097-1293
               

               
Cow position:
               
chrX:22914915-22915107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1097-1293
               

               
Cow position:
               
chrX:27511555-27511356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1294
               

               
Cow position:
               
chrX:25037114-25036915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1296
               

               
Cow position:
               
chrX:38208419-38208617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
1097-1297
               

               
Cow position:
               
chrX:126894-126694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
1097-1301
               

               
Cow position:
               
chrX:17966468-17966260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
1097-1301
               

               
Cow position:
               
chrX:23113412-23113199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
123, 186
               

               
Conread position:
               
1097-1301
               

               
Cow position:
               
chrX:41270859-41271077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1097-1302
               

               
Cow position:
               
chrX:39220206-39220000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 174
               

               
Conread position:
               
1097-1305
               

               
Cow position:
               
chrX:41238228-41238434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
1097-1306
               

               
Cow position:
               
chrX:16575239-16575039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1309
               

               
Cow position:
               
chrX:9252035-9252250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
1097-1310
               

               
Cow position:
               
chrX:13868829-13868615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 101
               

               
Conread position:
               
1097-1310
               

               
Cow position:
               
chrX:27261319-27261100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 189
               

               
Conread position:
               
1097-1310
               

               
Cow position:
               
chrX:31489647-31489431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 156
               

               
Conread position:
               
1097-1310
               

               
Cow position:
               
chrX:47054398-47054615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chrX:19162214-19162430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
1097-1312
               

               
Cow position:
               
chrX:44192317-44192533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 183
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chrX:33654717-33654933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
1097-1313
               

               
Cow position:
               
chrX:37129396-37129177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
122, 188
               

               
Conread position:
               
1097-1315
               

               
Cow position:
               
chrX:20168685-20168464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1315
               

               
Cow position:
               
chrX:36866299-36866078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
1097-1317
               

               
Cow position:
               
chrX:42855585-42855360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 171
               

               
Conread position:
               
1097-1322
               

               
Cow position:
               
chrX:21328040-21327802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1097-1324
               

               
Cow position:
               
chrX:28878047-28878274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
215, 125
               

               
Conread position:
               
1097-1325
               

               
Cow position:
               
chrX:169419-169644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 74
               

               
Conread position:
               
1097-1325
               

               
Cow position:
               
chrX:31515301-31515065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
1097-1325
               

               
Cow position:
               
chrX:43730097-43730322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 89
               

               
Conread position:
               
1097-1327
               

               
Cow position:
               
chrX:12290846-12290620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 136
               

               
Conread position:
               
1097-1327
               

               
Cow position:
               
chrX:34314151-34313923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
208, 131
               

               
Conread position:
               
1097-1330
               

               
Cow position:
               
chrX:4515817-4515577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 38
               

               
Conread position:
               
1097-1331
               

               
Cow position:
               
chrX:17231862-17231621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1332
               

               
Cow position:
               
chrX:29194357-29194123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
24, 54
               

               
Conread position:
               
1097-1332
               

               
Cow position:
               
chrX:43568046-43567811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
210, 122
               

               
Conread position:
               
1097-1333
               

               
Cow position:
               
chrX:6407670-6407437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:9650897-9651138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
138, 174
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:14973619-14973854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:28865879-28866112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:29230126-29229896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
210, 133
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:41123186-41122954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 89
               

               
Conread position:
               
1097-1334
               

               
Cow position:
               
chrX:45113748-45113504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
1097-1335
               

               
Cow position:
               
chrX:42380985-42381216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
208, 114
               

               
Conread position:
               
1097-1336
               

               
Cow position:
               
chrX:45174977-45174734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 201
               

               
Conread position:
               
1097-1337
               

               
Cow position:
               
chrX:15546009-15545777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chrX:26881438-26881685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1338
               

               
Cow position:
               
chrX:27705713-27705464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 104
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:4043740-4043970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:4768859-4768626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:7179021-7178785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:27516646-27516410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:34315648-34315407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:41068852-41068603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
123, 242
               

               
Conread position:
               
1097-1339
               

               
Cow position:
               
chrX:42247055-42247303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1097-1344
               

               
Cow position:
               
chrX:10831361-10831616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
1097-1344
               

               
Cow position:
               
chrX:36514765-36515014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
61, 211
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chrX:33640102-33639847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1097-1345
               

               
Cow position:
               
chrX:36976078-36975825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:12309259-12309510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
138, 154
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:22822173-22821926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
190, 140
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:31250515-31250268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
137, 220
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:31436601-31436353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
208, 167
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:36356232-36355990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
1097-1346
               

               
Cow position:
               
chrX:42873512-42873267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chrX:5872444-5872191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
209, 158
               

               
Conread position:
               
1097-1347
               

               
Cow position:
               
chrX:6690133-6690379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 152
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:616132-616389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:1514292-1514534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:4825709-4825952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:6278371-6278629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:7722115-7721862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:9416557-9416820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:11073064-11073315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 163
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:11614820-11614572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 53
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:11633810-11633551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:11656208-11655965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
210, 118
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:11717656-11717911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 215
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:13647658-13647912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 106
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:15147070-15147316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:17726102-17725847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 147
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:17888296-17888539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:18204336-18204590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:18694804-18695047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:20151983-20151719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:23561985-23561749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:25035255-25035511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
209, 140
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:27175125-27174868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:27393899-27394147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 133
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:27431791-27432041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
210, 133
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:28134465-28134223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:29601701-29601956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 251
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:29680134-29680387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:31312156-31311902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
113, 174
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:32420339-32420091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
209, 100
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:33001033-33000780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 146
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:33466751-33466484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
65, 157
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:33493903-33493651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:34411973-34411717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 238
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:34441327-34441579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
131, 90
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:34554850-34554597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
215, 134
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:34792185-34792434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
208, 44
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:35543014-35542768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:37232534-37232286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
210, 115
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:37489845-37489599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
210, 13
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:37955974-37955706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 193
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:38094393-38094650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:38218843-38218584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 174
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:38226983-38227222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:38728861-38728610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 110
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:38853324-38853071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 63
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:40269619-40269361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:40685201-40685458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:41878807-41879059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:42469814-42470068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:44961878-44961624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 244
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:45875519-45875264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:45968275-45968035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
210, 133
               

               
Conread position:
               
1097-1348
               

               
Cow position:
               
chrX:46072690-46072944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 236
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:7278038-7277787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
156, 183
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:7351424-7351171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:19690342-19690093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
200, 126
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:30962750-30963002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:31294445-31294685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:34222841-34222585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:35885600-35885858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 145
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:38549574-38549324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 86
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:41027286-41027029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1097-1349
               

               
Cow position:
               
chrX:41884285-41884542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1355
               

               
Cow position:
               
chrX:35268988-35268747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
1097-1357
               

               
Cow position:
               
chrX:45977054-45976784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1097-1360
               

               
Cow position:
               
chrX:8731220-8730948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:7336968-7336684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
79, 165
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:23091998-23091737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 157
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:27508899-27509164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:31442702-31442966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
210, 128
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:32821155-32820884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:38964235-38963962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 227
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:40557552-40557825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:42492397-42492659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 9
               

               
Conread position:
               
1097-1365
               

               
Cow position:
               
chrX:46587949-46587673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
1097-1366
               

               
Cow position:
               
chrX:34503047-34502777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 0
               

               
Conread position:
               
1097-1371
               

               
Cow position:
               
chrX:20339767-20340036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chrX:917241-917513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 103
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chrX:32330297-32330007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chrX:34238848-34238569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chrX:35382910-35383166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
196, 48
               

               
Conread position:
               
1097-1372
               

               
Cow position:
               
chrX:40035313-40035595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 86
               

               
Conread position:
               
1097-1383
               

               
Cow position:
               
chrX:9201675-9201386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
1097-1387
               

               
Cow position:
               
chrX:48044389-48044681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
1098-1288
               

               
Cow position:
               
chrX:15820720-15820531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1098-1312
               

               
Cow position:
               
chrX:5900588-5900379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1098-1325
               

               
Cow position:
               
chrX:34377068-34376843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
143, 113
               

               
Conread position:
               
1098-1346
               

               
Cow position:
               
chrX:22624602-22624359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
136, 179
               

               
Conread position:
               
1098-1346
               

               
Cow position:
               
chrX:31252533-31252293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
1098-1346
               

               
Cow position:
               
chrX:36311696-36311456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
208, 122
               

               
Conread position:
               
1098-1347
               

               
Cow position:
               
chrX:31729568-31729317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:630184-630433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:4268938-4269194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 142
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:9161701-9161458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:15815209-15814960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:29544751-29545005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
1098-1348
               

               
Cow position:
               
chrX:43527634-43527376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 119
               

               
Conread position:
               
1098-1349
               

               
Cow position:
               
chrX:29289704-29289452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
140, 196
               

               
Conread position:
               
1098-1355
               

               
Cow position:
               
chrX:6488701-6488442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
1099-1275
               

               
Cow position:
               
chrX:18964704-18964877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
1099-1317
               

               
Cow position:
               
chrX:12095647-12095870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
1099-1346
               

               
Cow position:
               
chrX:22453973-22454217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
1099-1347
               

               
Cow position:
               
chrX:39415245-39415493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
188, 176
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chrX:8797374-8797124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
1099-1348
               

               
Cow position:
               
chrX:28111634-28111379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
1099-1364
               

               
Cow position:
               
chrX:6260024-6260298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
1099-1366
               

               
Cow position:
               
chrX:5118373-5118647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 167
               

               
Conread position:
               
1099-1366
               

               
Cow position:
               
chrX:20801894-20801633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
207, 132
               

               
Conread position:
               
1100-1339
               

               
Cow position:
               
chrX:37910569-37910328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
127, 159
               

               
Conread position:
               
1100-1348
               

               
Cow position:
               
chrX:30133194-30133452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
1100-1349
               

               
Cow position:
               
chrX:152024-151776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
1101-1348
               

               
Cow position:
               
chrX:21566530-21566275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1103-1312
               

               
Cow position:
               
chrX:45099249-45099035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1103-1348
               

               
Cow position:
               
chrX:11082501-11082741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 163
               

               
Conread position:
               
1103-1348
               

               
Cow position:
               
chrX:30543163-30543414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1106-1372
               

               
Cow position:
               
chrX:42235406-42235684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1107-1270
               

               
Cow position:
               
chrX:29115822-29115663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1109-1284
               

               
Cow position:
               
chrX:13122053-13121868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1110-1243
               

               
Cow position:
               
chrX:25412021-25411886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1110-1270
               

               
Cow position:
               
chrX:19943122-19943285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
1110-1291
               

               
Cow position:
               
chrX:32623685-32623498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1110-1299
               

               
Cow position:
               
chrX:3130686-3130498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 154
               

               
Conread position:
               
1110-1317
               

               
Cow position:
               
chrX:47246643-47246843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
1110-1323
               

               
Cow position:
               
chrX:16348457-16348672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:4865347-4865120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
177, 65
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:25815787-25816025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 166
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:45089560-45089321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:45403711-45403955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:46722620-46722862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:47300789-47301027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:47302763-47303001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1346
               

               
Cow position:
               
chrX:48194921-48195165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
1110-1347
               

               
Cow position:
               
chrX:17964408-17964645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 115
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chrX:10411872-10412112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 175
               

               
Conread position:
               
1110-1348
               

               
Cow position:
               
chrX:38936814-38936573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1110-1357
               

               
Cow position:
               
chrX:27228240-27227987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 0
               

               
Conread position:
               
1110-1365
               

               
Cow position:
               
chrX:2786443-2786693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
1110-1372
               

               
Cow position:
               
chrX:17042796-17042540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
177, 28
               

               
Conread position:
               
1112-1346
               

               
Cow position:
               
chrX:3580056-3579819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
1113-1288
               

               
Cow position:
               
chrX:41111827-41111655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
1113-1317
               

               
Cow position:
               
chrX:29549439-29549644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
1113-1324
               

               
Cow position:
               
chrX:47967718-47967495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
1113-1339
               

               
Cow position:
               
chrX:4403428-4403196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 115
               

               
Conread position:
               
1113-1340
               

               
Cow position:
               
chrX:21004795-21004563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 152
               

               
Conread position:
               
1113-1343
               

               
Cow position:
               
chrX:46433602-46433364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1113-1346
               

               
Cow position:
               
chrX:20377081-20376840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:1615932-1616171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:3154132-3154371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:7497353-7497116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:7710428-7710670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:23513906-23514142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:24259468-24259709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 199
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:25570883-25571121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:25713906-25713670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:31340821-31340581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:32310217-32309982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:41674215-41673981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
1113-1348
               

               
Cow position:
               
chrX:45598494-45598727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
1113-1350
               

               
Cow position:
               
chrX:4632746-4632981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
1114-1346
               

               
Cow position:
               
chrX:11844131-11844372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
1114-1348
               

               
Cow position:
               
chrX:31260504-31260753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 194
               

               
Conread position:
               
1114-1349
               

               
Cow position:
               
chrX:32170779-32171016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
1114-1365
               

               
Cow position:
               
chrX:20887531-20887790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
1114-1365
               

               
Cow position:
               
chrX:26625561-26625817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
1114-1365
               

               
Cow position:
               
chrX:36283450-36283205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 108
               

               
Conread position:
               
1115-1346
               

               
Cow position:
               
chrX:34454766-34454539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
192, 71
               

               
Conread position:
               
1115-1347
               

               
Cow position:
               
chrX:44054911-44054675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
1115-1348
               

               
Cow position:
               
chrX:21642373-21642605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 17
               

               
Conread position:
               
1118-1345
               

               
Cow position:
               
chrX:12249922-12249679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
1118-1347
               

               
Cow position:
               
chrX:40692645-40692877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 184
               

               
Conread position:
               
1118-1348
               

               
Cow position:
               
chrX:47186218-47186448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
178, 107
               

               
Conread position:
               
1119-1340
               

               
Cow position:
               
chrX:27446791-27446571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
194, 101
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chrX:15485529-15485752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chrX:23563686-23563918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chrX:32020029-32020247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1346
               

               
Cow position:
               
chrX:40183249-40183471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1119-1371
               

               
Cow position:
               
chrX:18111483-18111239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
1120-1279
               

               
Cow position:
               
chrX:40108414-40108573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
1120-1321
               

               
Cow position:
               
chrX:25440894-25441091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
184, 112
               

               
Conread position:
               
1120-1337
               

               
Cow position:
               
chrX:878276-878493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
95, 165
               

               
Conread position:
               
1120-1344
               

               
Cow position:
               
chrX:45429918-45430140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
187, 104
               

               
Conread position:
               
1120-1346
               

               
Cow position:
               
chrX:21986187-21986417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
1120-1347
               

               
Cow position:
               
chrX:22074904-22074674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 159
               

               
Conread position:
               
1120-1347
               

               
Cow position:
               
chrX:43115254-43115025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chrX:7162160-7161933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chrX:7646355-7646129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chrX:12979730-12979954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
187, 105
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chrX:27680502-27680272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
100, 161
               

               
Conread position:
               
1120-1348
               

               
Cow position:
               
chrX:37986329-37986106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
1120-1349
               

               
Cow position:
               
chrX:8869298-8869530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 122
               

               
Conread position:
               
1120-1390
               

               
Cow position:
               
chrX:17542067-17541802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
1121-1337
               

               
Cow position:
               
chrX:24331879-24331662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:7509242-7509015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:13245700-13245467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:20697506-20697734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
102, 117
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:27771865-27772088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:36068118-36067890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 188
               

               
Conread position:
               
1121-1348
               

               
Cow position:
               
chrX:47046411-47046642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
186, 36
               

               
Conread position:
               
1121-1350
               

               
Cow position:
               
chrX:48570885-48571124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
1122-1303
               

               
Cow position:
               
chrX:11317866-11318048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1122-1346
               

               
Cow position:
               
chrX:45846203-45845974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chrX:14883853-14884085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
1122-1348
               

               
Cow position:
               
chrX:48236919-48236689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
76, 16
               

               
Conread position:
               
1122-1349
               

               
Cow position:
               
chrX:26493108-26492878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 105
               

               
Conread position:
               
1122-1355
               

               
Cow position:
               
chrX:37781007-37781245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1124-1407
               

               
Cow position:
               
chrX:27301976-27301686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
1124-1408
               

               
Cow position:
               
chrX:30263358-30263065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 289
               

               
Conread position:
               
1128-1324
               

               
Cow position:
               
chrX:28013346-28013551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
1128-1381
               

               
Cow position:
               
chrX:46546779-46547036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
1129-1348
               

               
Cow position:
               
chrX:25207760-25207970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
176, 88
               

               
Conread position:
               
1129-1372
               

               
Cow position:
               
chrX:24365726-24365975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 208
               

               
Conread position:
               
1130-1348
               

               
Cow position:
               
chrX:5919586-5919369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 146
               

               
Conread position:
               
1130-1348
               

               
Cow position:
               
chrX:27685343-27685120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1130-1348
               

               
Cow position:
               
chrX:34402094-34401871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
1131-1305
               

               
Cow position:
               
chrX:4296732-4296902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1131-1310
               

               
Cow position:
               
chrX:48071254-48071072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1131-1321
               

               
Cow position:
               
chrX:15231567-15231758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 140
               

               
Conread position:
               
1131-1325
               

               
Cow position:
               
chrX:29938184-29937983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
1131-1332
               

               
Cow position:
               
chrX:17949400-17949601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 56
               

               
Conread position:
               
1131-1333
               

               
Cow position:
               
chrX:44873468-44873673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
1131-1336
               

               
Cow position:
               
chrX:47873243-47873454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1131-1337
               

               
Cow position:
               
chrX:40826658-40826871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 86
               

               
Conread position:
               
1131-1340
               

               
Cow position:
               
chrX:27119790-27119582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
92, 142
               

               
Conread position:
               
1131-1343
               

               
Cow position:
               
chrX:40320499-40320283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
100, 123
               

               
Conread position:
               
1131-1344
               

               
Cow position:
               
chrX:4279025-4279234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
110, 156
               

               
Conread position:
               
1131-1345
               

               
Cow position:
               
chrX:27945961-27946183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:7863488-7863694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:20677459-20677247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:21593374-21593162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:22813155-22812939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:22921414-22921191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:40809786-40809561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:47165793-47166011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 164
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:47484171-47484393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:48010697-48010473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1131-1346
               

               
Cow position:
               
chrX:48262699-48262481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:2467977-2467756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:3654701-3654481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:37843810-37843593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:40480779-40480996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:46770870-46771095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
174, 118
               

               
Conread position:
               
1131-1348
               

               
Cow position:
               
chrX:47344389-47344171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
81, 200
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:842250-842028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:3488798-3489019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:8917487-8917268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
175, 87
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:10865782-10865996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 46
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:16762864-16762638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
103, 149
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:18485896-18485670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:21672653-21672427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
1131-1349
               

               
Cow position:
               
chrX:23583654-23583434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
1131-1350
               

               
Cow position:
               
chrX:4746151-4746368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
1131-1365
               

               
Cow position:
               
chrX:36061253-36061011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 88
               

               
Conread position:
               
1132-1339
               

               
Cow position:
               
chrX:34662754-34662968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1132-1349
               

               
Cow position:
               
chrX:14955677-14955893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
174, 71
               

               
Conread position:
               
1133-1318
               

               
Cow position:
               
chrX:48201384-48201199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
1133-1319
               

               
Cow position:
               
chrX:40283212-40283027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
1133-1340
               

               
Cow position:
               
chrX:26440694-26440898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
1133-1344
               

               
Cow position:
               
chrX:24287842-24288047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
1133-1346
               

               
Cow position:
               
chrX:31948844-31949059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
1134-1348
               

               
Cow position:
               
chrX:12405291-12405514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1134-1348
               

               
Cow position:
               
chrX:29542127-29542346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1135-1285
               

               
Cow position:
               
chrX:43973634-43973481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
1135-1312
               

               
Cow position:
               
chrX:1572050-1572228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
1135-1348
               

               
Cow position:
               
chrX:19930737-19930528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
1136-1304
               

               
Cow position:
               
chrX:6559360-6559527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1137-1348
               

               
Cow position:
               
chrX:48385276-48385487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
166, 51
               

               
Conread position:
               
1137-1377
               

               
Cow position:
               
chrX:20710161-20709919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
1139-1346
               

               
Cow position:
               
chrX:42507563-42507771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 81
               

               
Conread position:
               
1139-1348
               

               
Cow position:
               
chrX:4399211-4399002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
1139-1348
               

               
Cow position:
               
chrX:29723825-29723614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
108, 86
               

               
Conread position:
               
1140-1349
               

               
Cow position:
               
chrX:47657470-47657257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
85, 144
               

               
Conread position:
               
1141-1346
               

               
Cow position:
               
chrX:16416592-16416385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
1142-1339
               

               
Cow position:
               
chrX:29875995-29876188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
1142-1349
               

               
Cow position:
               
chrX:10394022-10394226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1142-1349
               

               
Cow position:
               
chrX:38071684-38071894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
1143-1344
               

               
Cow position:
               
chrX:27449917-27450122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
1143-1348
               

               
Cow position:
               
chrX:11589507-11589715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1143-1365
               

               
Cow position:
               
chrX:8900102-8899884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
1145-1348
               

               
Cow position:
               
chrX:11454963-11455185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1147-1347
               

               
Cow position:
               
chrX:19003370-19003174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
1147-1366
               

               
Cow position:
               
chrX:24105701-24105481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
1148-1348
               

               
Cow position:
               
chrX:618926-619131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1148-1349
               

               
Cow position:
               
chrX:28632409-28632611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
1150-1348
               

               
Cow position:
               
chrX:13785286-13785490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1151-1340
               

               
Cow position:
               
chrX:28846820-28847001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
155, 69
               

               
Conread position:
               
1154-1344
               

               
Cow position:
               
chrX:20790983-20790798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
1154-1347
               

               
Cow position:
               
chrX:41743984-41743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
1154-1365
               

               
Cow position:
               
chrX:14900663-14900866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
73, 34
               

               
Conread position:
               
1155-1348
               

               
Cow position:
               
chrX:26875812-26876010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 92
               

               
Conread position:
               
1156-1339
               

               
Cow position:
               
chrX:1810092-1810282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
1157-1348
               

               
Cow position:
               
chrX:36778475-36778284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
149, 79
               

               
Conread position:
               
1158-1334
               

               
Cow position:
               
chrX:38654364-38654543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 140
               

               
Conread position:
               
1159-1348
               

               
Cow position:
               
chrX:19188996-19188813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
147, 68
               

               
Conread position:
               
1160-1291
               

               
Cow position:
               
chrX:17301242-17301378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1160-1338
               

               
Cow position:
               
chrX:12018356-12018171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1160-1348
               

               
Cow position:
               
chrX:34270466-34270274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 104
               

               
Conread position:
               
1161-1325
               

               
Cow position:
               
chrX:35848627-35848457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
1161-1346
               

               
Cow position:
               
chrX:39938460-39938645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
1161-1366
               

               
Cow position:
               
chrX:25232656-25232445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1163-1349
               

               
Cow position:
               
chrX:36961702-36961511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
1163-1362
               

               
Cow position:
               
chrX:16055275-16055072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 101
               

               
Conread position:
               
1163-1386
               

               
Cow position:
               
chrX:28105980-28105759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 174
               

               
Conread position:
               
1164-1298
               

               
Cow position:
               
chrX:6855460-6855325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1164-1348
               

               
Cow position:
               
chrX:7718909-7718731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
1164-1348
               

               
Cow position:
               
chrX:41166902-41167092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1164-1349
               

               
Cow position:
               
chrX:9425683-9425868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
1164-1349
               

               
Cow position:
               
chrX:34754131-34754316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
1164-1349
               

               
Cow position:
               
chrX:35042278-35042095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
1165-1339
               

               
Cow position:
               
chrX:41991986-41992164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
1168-1348
               

               
Cow position:
               
chrX:9855354-9855177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
1168-1348
               

               
Cow position:
               
chrX:9954195-9954018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
1168-1372
               

               
Cow position:
               
chrX:40648044-40647836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 164
               

               
Conread position:
               
1169-1347
               

               
Cow position:
               
chrX:16789801-16789968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1169-1347
               

               
Cow position:
               
chrX:48243411-48243587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
1170-1348
               

               
Cow position:
               
chrX:23970433-23970257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
1171-1325
               

               
Cow position:
               
chrX:29487955-29488106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
1171-1340
               

               
Cow position:
               
chrX:28845886-28845713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
1172-1333
               

               
Cow position:
               
chrX:42461692-42461856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1172-1348
               

               
Cow position:
               
chrX:42875035-42874854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
1173-1348
               

               
Cow position:
               
chrX:43049394-43049221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
1173-1364
               

               
Cow position:
               
chrX:35681393-35681193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
1174-1347
               

               
Cow position:
               
chrX:17498135-17497960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
54, 80
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chrX:15139499-15139672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chrX:20752303-20752128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chrX:40452170-40452336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
1176-1348
               

               
Cow position:
               
chrX:47191359-47191531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1177-1340
               

               
Cow position:
               
chrX:41199155-41198983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
1177-1346
               

               
Cow position:
               
chrX:42994660-42994491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
1178-1348
               

               
Cow position:
               
chrX:40567643-40567476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 5
               

               
Conread position:
               
1179-1312
               

               
Cow position:
               
chrX:42789665-42789530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1183-1348
               

               
Cow position:
               
chrX:47756887-47757056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
1183-1349
               

               
Cow position:
               
chrX:18999929-18999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1183-1368
               

               
Cow position:
               
chrX:32127951-32128131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
1184-1313
               

               
Cow position:
               
chrX:12116087-12115954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chrX:36723049-36723218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1184-1348
               

               
Cow position:
               
chrX:47379427-47379605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1185-1312
               

               
Cow position:
               
chrX:25282976-25283104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1187-1348
               

               
Cow position:
               
chrX:9997297-9997462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1187-1349
               

               
Cow position:
               
chrX:27442520-27442680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 140
               

               
Conread position:
               
1188-1334
               

               
Cow position:
               
chrX:32747718-32747570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
1190-1348
               

               
Cow position:
               
chrX:26286015-26285852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
1192-1340
               

               
Cow position:
               
chrX:42338919-42339058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
1194-1330
               

               
Cow position:
               
chrX:8326789-8326651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
1194-1337
               

               
Cow position:
               
chrX:35969056-35969203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1194-1339
               

               
Cow position:
               
chrX:17908258-17908404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
1194-1339
               

               
Cow position:
               
chrX:30832822-30832965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
1194-1346
               

               
Cow position:
               
chrX:37048551-37048701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
1194-1347
               

               
Cow position:
               
chrX:38439511-38439352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1194-1348
               

               
Cow position:
               
chrX:14003616-14003768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
1194-1365
               

               
Cow position:
               
chrX:29509408-29509588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1196-1348
               

               
Cow position:
               
chrX:2383513-2383361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
1196-1348
               

               
Cow position:
               
chrX:40116445-40116294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
1203-1334
               

               
Cow position:
               
chrX:23497646-23497781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1203-1365
               

               
Cow position:
               
chrX:14925022-14924855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
1210-1332
               

               
Cow position:
               
chrX:10079437-10079560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1215-1348
               

               
Cow position:
               
chrX:35284628-35284492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1218-1346
               

               
Cow position:
               
chrX:42282432-42282306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1220-1346
               

               
Cow position:
               
chrX:35609989-35609863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
1220-1348
               

               
Cow position:
               
chrX:35387901-35388029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
1220-1365
               

               
Cow position:
               
chrX:11806012-11806157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 20
               

               
Conread position:
               
1223-1347
               

               
Cow position:
               
chrX:11562154-11562030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
1225-1348
               

               
Cow position:
               
chrX:46315380-46315504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1228-1349
               

               
Cow position:
               
chrX:4091641-4091517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
1242-1346
               

               
Cow position:
               
chrX:38967628-38967525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
1242-1365
               

               
Cow position:
               
chrX:25411821-25411696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
1244-1348
               

               
Cow position:
               
chrX:41764624-41764514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1253-1348
               

               
Cow position:
               
chrX:27145592-27145496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               
Show alignments to all cow chromosomes.