Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 252-652 |
| Cow position: | chr10:36916330-36916723 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 262-689 |
| Cow position: | chr10:25578472-25578899 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 270-644 |
| Cow position: | chr10:68887176-68886814 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 281-631 |
| Cow position: | chr10:22529895-22530251 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 19 |
| Conread position: | 281-660 |
| Cow position: | chr10:12158677-12159063 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 282-647 |
| Cow position: | chr10:55581318-55581678 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 46 |
| Conread position: | 296-661 |
| Cow position: | chr10:5639937-5640309 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 74, 24 |
| Conread position: | 298-661 |
| Cow position: | chr10:17132581-17132209 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 318-687 |
| Cow position: | chr10:38832935-38832553 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 399-664 |
| Cow position: | chr10:54825941-54826208 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 404-664 |
| Cow position: | chr10:6473595-6473335 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 417-661 |
| Cow position: | chr10:963537-963283 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 468-649 |
| Cow position: | chr10:27094095-27094276 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 468-661 |
| Cow position: | chr10:23101332-23101528 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 468-661 |
| Cow position: | chr10:49369918-49370111 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 469-647 |
| Cow position: | chr10:36493015-36492837 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 469-661 |
| Cow position: | chr10:10687508-10687318 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 469-665 |
| Cow position: | chr10:23918527-23918726 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 475-663 |
| Cow position: | chr10:30236594-30236410 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 180, 29 |
| Conread position: | 476-649 |
| Cow position: | chr10:53395165-53395336 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 477-664 |
| Cow position: | chr10:43342667-43342857 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 480-649 |
| Cow position: | chr10:29823536-29823697 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 480-664 |
| Cow position: | chr10:20745048-20744863 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 481-649 |
| Cow position: | chr10:8729318-8729150 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 496-661 |
| Cow position: | chr10:40707717-40707551 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 505-647 |
| Cow position: | chr10:6906953-6906809 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 505-661 |
| Cow position: | chr10:61244025-61244180 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 150, 56 |
| Conread position: | 506-661 |
| Cow position: | chr10:8839228-8839071 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 129 |
| Conread position: | 509-718 |
| Cow position: | chr10:49562282-49562486 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 135 |
| Conread position: | 512-659 |
| Cow position: | chr10:36233733-36233587 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 512-661 |
| Cow position: | chr10:52567396-52567550 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 513-675 |
| Cow position: | chr10:56604434-56604274 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 139, 42 |
| Conread position: | 525-661 |
| Cow position: | chr10:55077862-55077724 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 526-664 |
| Cow position: | chr10:31741003-31740862 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 709-864 |
| Cow position: | chr10:35182258-35182104 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 19 |
| Conread position: | 730-876 |
| Cow position: | chr10:60244165-60244015 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 733-864 |
| Cow position: | chr10:5421831-5421963 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.