Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055J03.5
        

               Conread position:
               250-661
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               262-644
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               273-648
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               273-649
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               281-661
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               282-661
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               283-661
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 37
               

               Conread position:
               285-648
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               288-649
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               292-644
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               294-661
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               298-624
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               298-649
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               298-649
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               298-660
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               298-733
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               300-814
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               303-644
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               73, 46
               

               Conread position:
               306-661
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               316-634
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               316-718
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               318-648
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 41
               

               Conread position:
               375-661
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               399-649
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               64, 6
               

               Conread position:
               400-665
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               406-649
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 217
               

               Conread position:
               413-649
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               413-649
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               467-687
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 41
               

               Conread position:
               468-649
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 41
               

               Conread position:
               468-661
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               468-661
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 40
               

               Conread position:
               468-661
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               468-664
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               187, 40
               

               Conread position:
               470-647
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 39
               

               Conread position:
               476-647
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 36
               

               Conread position:
               476-661
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               476-664
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               8, 33
               

               Conread position:
               477-634
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               477-644
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               477-649
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               477-661
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               478-649
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               478-661
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               478-661
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               479-661
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               479-661
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               479-688
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               481-661
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               483-661
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               508-649
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               508-661
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               510-648
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               511-649
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               512-648
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               512-649
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               512-661
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               512-661
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               512-675
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               516-686
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               528-688
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               700-870
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               704-864
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               705-876
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               730-864
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               730-864
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               730-864
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               748-864
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 0
               
Show alignments to all cow chromosomes.