Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 266-661 |
| Cow position: | chr19:14272263-14271880 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 267-649 |
| Cow position: | chr19:29090350-29089963 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 272-661 |
| Cow position: | chr19:29135242-29134852 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 285-619 |
| Cow position: | chr19:16270385-16270724 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 298-644 |
| Cow position: | chr19:18008961-18008616 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 298-661 |
| Cow position: | chr19:24683070-24683431 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 298-661 |
| Cow position: | chr19:46840662-46841007 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 298-668 |
| Cow position: | chr19:5481804-5482184 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 90, 22 |
| Conread position: | 307-644 |
| Cow position: | chr19:47279842-47279506 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 17 |
| Conread position: | 309-659 |
| Cow position: | chr19:15236453-15236807 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 319-649 |
| Cow position: | chr19:31802806-31802479 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 326-641 |
| Cow position: | chr19:13933048-13933356 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 327-649 |
| Cow position: | chr19:43414278-43414606 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 328-654 |
| Cow position: | chr19:46515075-46514754 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 468-661 |
| Cow position: | chr19:47013176-47013371 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 469-661 |
| Cow position: | chr19:17687008-17686815 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 36 |
| Conread position: | 470-628 |
| Cow position: | chr19:21343048-21342888 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 471-657 |
| Cow position: | chr19:1303076-1303263 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 477-661 |
| Cow position: | chr19:36078286-36078468 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 68, 16 |
| Conread position: | 478-661 |
| Cow position: | chr19:18216409-18216592 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 177, 30 |
| Conread position: | 505-664 |
| Cow position: | chr19:29630592-29630754 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 512-661 |
| Cow position: | chr19:41324974-41324825 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 143, 49 |
| Conread position: | 512-665 |
| Cow position: | chr19:791237-791083 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 512-673 |
| Cow position: | chr19:7590443-7590279 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 514-644 |
| Cow position: | chr19:15883286-15883418 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 515-649 |
| Cow position: | chr19:28644037-28643902 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 518-687 |
| Cow position: | chr19:21551723-21551550 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 164 |
| Conread position: | 698-847 |
| Cow position: | chr19:33955358-33955205 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 704-861 |
| Cow position: | chr19:41504560-41504400 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 18, 83 |
| Conread position: | 705-864 |
| Cow position: | chr19:30880404-30880246 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 730-864 |
| Cow position: | chr19:30385333-30385201 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.