Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 265-675 |
| Cow position: | chr2:545045-545453 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 105, 33 |
| Conread position: | 285-649 |
| Cow position: | chr2:38562124-38561760 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 298-644 |
| Cow position: | chr2:28560369-28560026 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 298-654 |
| Cow position: | chr2:22668660-22669023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 303-661 |
| Cow position: | chr2:6115827-6116183 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 17 |
| Conread position: | 309-643 |
| Cow position: | chr2:62107812-62107476 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 310-644 |
| Cow position: | chr2:60891101-60890762 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 317-666 |
| Cow position: | chr2:14723808-14724159 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 37 |
| Conread position: | 318-661 |
| Cow position: | chr2:26275122-26275462 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 319-665 |
| Cow position: | chr2:21914395-21914031 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 32 |
| Conread position: | 328-661 |
| Cow position: | chr2:59697998-59697665 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 24 |
| Conread position: | 346-661 |
| Cow position: | chr2:8724024-8724339 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 381-661 |
| Cow position: | chr2:37888624-37888337 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 397-661 |
| Cow position: | chr2:21328928-21328656 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 115 |
| Conread position: | 413-657 |
| Cow position: | chr2:82472358-82472608 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 60, 16 |
| Conread position: | 463-661 |
| Cow position: | chr2:33086809-33087007 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 468-649 |
| Cow position: | chr2:3738588-3738407 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 468-661 |
| Cow position: | chr2:63150378-63150187 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 470-649 |
| Cow position: | chr2:5732484-5732664 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 471-657 |
| Cow position: | chr2:85742542-85742354 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 476-648 |
| Cow position: | chr2:33583117-33583285 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 477-649 |
| Cow position: | chr2:79894875-79894704 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 477-657 |
| Cow position: | chr2:61813537-61813357 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 140, 39 |
| Conread position: | 477-661 |
| Cow position: | chr2:35380461-35380275 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 477-661 |
| Cow position: | chr2:36839930-36839746 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 27 |
| Conread position: | 477-674 |
| Cow position: | chr2:75845047-75845242 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 478-644 |
| Cow position: | chr2:24275824-24275657 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 478-648 |
| Cow position: | chr2:14152076-14151904 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 478-661 |
| Cow position: | chr2:21377131-21376946 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 479-649 |
| Cow position: | chr2:5717507-5717676 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 479-654 |
| Cow position: | chr2:18936258-18936085 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 497-644 |
| Cow position: | chr2:47932704-47932854 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 506-661 |
| Cow position: | chr2:17708458-17708301 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 142 |
| Conread position: | 506-688 |
| Cow position: | chr2:32984351-32984170 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 137 |
| Conread position: | 510-663 |
| Cow position: | chr2:75121490-75121336 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 56, 87 |
| Conread position: | 512-643 |
| Cow position: | chr2:57993659-57993525 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 512-661 |
| Cow position: | chr2:851977-852129 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 512-661 |
| Cow position: | chr2:7961268-7961119 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 513-661 |
| Cow position: | chr2:431304-431451 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 51 |
| Conread position: | 517-661 |
| Cow position: | chr2:34290503-34290356 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 703-862 |
| Cow position: | chr2:13685191-13685041 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 703-864 |
| Cow position: | chr2:38805749-38805910 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 704-862 |
| Cow position: | chr2:18274066-18274221 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 704-864 |
| Cow position: | chr2:72599419-72599257 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 704-864 |
| Cow position: | chr2:74387526-74387684 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 730-854 |
| Cow position: | chr2:33790906-33791028 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 730-876 |
| Cow position: | chr2:13048783-13048630 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
Show alignments to all cow chromosomes.