Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055J03.5
        

               Conread position:
               271-644
               

               Cow position:
               chr20:8719306-8718929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               298-664
               

               Cow position:
               chr20:150647-150285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               374-669
               

               Cow position:
               chr20:1330196-1330492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               107, 36
               

               Conread position:
               470-644
               

               Cow position:
               chr20:9269660-9269489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               477-661
               

               Cow position:
               chr20:5726419-5726233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               478-644
               

               Cow position:
               chr20:26786860-26787026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               501-661
               

               Cow position:
               chr20:4619879-4620039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               512-647
               

               Cow position:
               chr20:12196106-12196242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 25
               

               Conread position:
               512-659
               

               Cow position:
               chr20:34840452-34840601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               704-864
               

               Cow position:
               chr20:20350150-20350310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               709-864
               

               Cow position:
               chr20:15147356-15147510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               730-864
               

               Cow position:
               chr20:3376686-3376821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 0
               
Show alignments to all cow chromosomes.