Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 256-660 |
| Cow position: | chr22:13874356-13873946 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 268-649 |
| Cow position: | chr22:9639093-9638709 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 101, 54 |
| Conread position: | 298-649 |
| Cow position: | chr22:12069918-12070265 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 298-660 |
| Cow position: | chr22:43354032-43354391 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 298-661 |
| Cow position: | chr22:8268745-8268385 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 176, 22 |
| Conread position: | 298-661 |
| Cow position: | chr22:29893473-29893092 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 303-687 |
| Cow position: | chr22:29513799-29514183 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 318-661 |
| Cow position: | chr22:7805967-7805623 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 368-661 |
| Cow position: | chr22:7299938-7299641 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 393-641 |
| Cow position: | chr22:8243541-8243281 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 203 |
| Conread position: | 417-641 |
| Cow position: | chr22:11990788-11990561 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 464-661 |
| Cow position: | chr22:42018875-42018674 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 468-661 |
| Cow position: | chr22:26963232-26963037 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 31 |
| Conread position: | 469-661 |
| Cow position: | chr22:39900785-39900975 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 476-659 |
| Cow position: | chr22:28315365-28315179 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 138 |
| Conread position: | 476-661 |
| Cow position: | chr22:42389153-42388967 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 477-641 |
| Cow position: | chr22:8645640-8645805 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 477-644 |
| Cow position: | chr22:32912565-32912402 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 477-661 |
| Cow position: | chr22:25449759-25449945 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 478-640 |
| Cow position: | chr22:27007339-27007177 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 479-634 |
| Cow position: | chr22:25701630-25701783 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 481-661 |
| Cow position: | chr22:8966671-8966851 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 82, 27 |
| Conread position: | 493-649 |
| Cow position: | chr22:11080648-11080806 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 501-648 |
| Cow position: | chr22:24268217-24268365 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 107 |
| Conread position: | 505-661 |
| Cow position: | chr22:45542738-45542897 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 507-661 |
| Cow position: | chr22:26626295-26626137 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 510-664 |
| Cow position: | chr22:4247811-4247967 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 511-655 |
| Cow position: | chr22:38176803-38176661 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 512-629 |
| Cow position: | chr22:39737871-39737986 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 512-649 |
| Cow position: | chr22:44578356-44578217 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 515-661 |
| Cow position: | chr22:8078808-8078659 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 516-661 |
| Cow position: | chr22:34085302-34085450 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 730-864 |
| Cow position: | chr22:41321869-41321736 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 731-868 |
| Cow position: | chr22:29064897-29064759 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.