Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 298-649 |
| Cow position: | chr23:36159669-36159323 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 141, 26 |
| Conread position: | 327-649 |
| Cow position: | chr23:6023502-6023176 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 331-687 |
| Cow position: | chr23:10413751-10414112 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 341-628 |
| Cow position: | chr23:10259665-10259950 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 375-640 |
| Cow position: | chr23:17290386-17290650 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 99, 18 |
| Conread position: | 453-644 |
| Cow position: | chr23:9229563-9229370 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 109, 46 |
| Conread position: | 469-660 |
| Cow position: | chr23:35276380-35276186 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 470-659 |
| Cow position: | chr23:32416593-32416780 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 470-661 |
| Cow position: | chr23:9293810-9294003 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 476-661 |
| Cow position: | chr23:25773200-25773013 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 480-650 |
| Cow position: | chr23:27181047-27181218 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 480-676 |
| Cow position: | chr23:7904442-7904244 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 508-661 |
| Cow position: | chr23:354122-354276 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 132 |
| Conread position: | 510-644 |
| Cow position: | chr23:11756913-11756778 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 514-664 |
| Cow position: | chr23:281663-281509 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 520-648 |
| Cow position: | chr23:39116283-39116414 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 538-661 |
| Cow position: | chr23:19940857-19940979 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 117, 23 |
| Conread position: | 700-862 |
| Cow position: | chr23:24400573-24400737 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 706-864 |
| Cow position: | chr23:16171322-16171162 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 709-863 |
| Cow position: | chr23:30691428-30691579 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 103 |
Show alignments to all cow chromosomes.