Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 262-658 |
| Cow position: | chr24:25894961-25894566 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 203, 36 |
| Conread position: | 281-644 |
| Cow position: | chr24:26650875-26651240 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 283-661 |
| Cow position: | chr24:23161943-23161577 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 32 |
| Conread position: | 287-661 |
| Cow position: | chr24:26776254-26776624 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 298-717 |
| Cow position: | chr24:28537614-28537201 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 175, 22 |
| Conread position: | 300-687 |
| Cow position: | chr24:28682526-28682131 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 363-660 |
| Cow position: | chr24:5891429-5891735 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 368-661 |
| Cow position: | chr24:39190450-39190157 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 393-629 |
| Cow position: | chr24:28911100-28910858 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 12 |
| Conread position: | 406-661 |
| Cow position: | chr24:44363062-44363325 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 98 |
| Conread position: | 468-661 |
| Cow position: | chr24:43025758-43025565 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 469-661 |
| Cow position: | chr24:42959511-42959318 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 476-661 |
| Cow position: | chr24:23988461-23988275 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 476-664 |
| Cow position: | chr24:18846920-18846732 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 87, 32 |
| Conread position: | 477-693 |
| Cow position: | chr24:16303029-16303249 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 478-638 |
| Cow position: | chr24:24455643-24455483 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 478-657 |
| Cow position: | chr24:31117411-31117232 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 478-660 |
| Cow position: | chr24:31033840-31033658 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 15 |
| Conread position: | 505-649 |
| Cow position: | chr24:18914429-18914283 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 506-647 |
| Cow position: | chr24:38884567-38884709 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 129 |
| Conread position: | 510-661 |
| Cow position: | chr24:32714995-32715144 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 30 |
| Conread position: | 514-659 |
| Cow position: | chr24:26555705-26555557 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 704-864 |
| Cow position: | chr24:42817840-42817686 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 717-876 |
| Cow position: | chr24:6177967-6177805 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 730-863 |
| Cow position: | chr24:42338936-42338802 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.