Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 256-661 |
| Cow position: | chr25:12449010-12449424 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 264-661 |
| Cow position: | chr25:24653568-24653171 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 283-661 |
| Cow position: | chr25:5211756-5212121 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 295-630 |
| Cow position: | chr25:26870283-26869942 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 320-661 |
| Cow position: | chr25:16966995-16967341 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 51 |
| Conread position: | 327-657 |
| Cow position: | chr25:24662911-24663247 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 344-661 |
| Cow position: | chr25:5917032-5917357 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 389-661 |
| Cow position: | chr25:32116578-32116850 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 393-649 |
| Cow position: | chr25:4151075-4151342 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 125 |
| Conread position: | 394-647 |
| Cow position: | chr25:36798109-36798368 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 399-649 |
| Cow position: | chr25:10411683-10411939 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 73, 6 |
| Conread position: | 425-661 |
| Cow position: | chr25:19054999-19054758 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 125 |
| Conread position: | 469-660 |
| Cow position: | chr25:8348015-8348210 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 469-664 |
| Cow position: | chr25:22277321-22277519 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 477-661 |
| Cow position: | chr25:30019204-30019393 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 123 |
| Conread position: | 480-661 |
| Cow position: | chr25:14547761-14547941 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 175, 28 |
| Conread position: | 505-688 |
| Cow position: | chr25:23759346-23759534 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 92 |
| Conread position: | 505-733 |
| Cow position: | chr25:13215637-13215857 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 151 |
| Conread position: | 512-648 |
| Cow position: | chr25:11757782-11757918 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 512-649 |
| Cow position: | chr25:16039362-16039501 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 512-660 |
| Cow position: | chr25:4188154-4188305 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.