Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 287-659 |
| Cow position: | chr28:676474-676847 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 291-649 |
| Cow position: | chr28:4024122-4023769 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 79, 23 |
| Conread position: | 300-661 |
| Cow position: | chr28:9126069-9126434 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 308-613 |
| Cow position: | chr28:19190429-19190115 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 53 |
| Conread position: | 351-644 |
| Cow position: | chr28:25138874-25139171 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 352-649 |
| Cow position: | chr28:23904291-23903986 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 375-623 |
| Cow position: | chr28:20148103-20147845 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 375-649 |
| Cow position: | chr28:20710830-20710557 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 402-658 |
| Cow position: | chr28:23020582-23020836 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 416-661 |
| Cow position: | chr28:5064053-5063805 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 417-649 |
| Cow position: | chr28:11857536-11857295 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 468-661 |
| Cow position: | chr28:34574036-34573841 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 469-644 |
| Cow position: | chr28:20374673-20374495 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 471-688 |
| Cow position: | chr28:26595689-26595472 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 30 |
| Conread position: | 476-660 |
| Cow position: | chr28:2826203-2826020 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 179, 32 |
| Conread position: | 482-661 |
| Cow position: | chr28:14925481-14925664 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 26 |
| Conread position: | 505-687 |
| Cow position: | chr28:29123189-29123377 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 512-649 |
| Cow position: | chr28:22270260-22270121 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 512-651 |
| Cow position: | chr28:23688464-23688604 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 512-660 |
| Cow position: | chr28:31654879-31654732 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 512-661 |
| Cow position: | chr28:23111841-23111689 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 705-863 |
| Cow position: | chr28:5912239-5912396 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 705-876 |
| Cow position: | chr28:16251657-16251827 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 730-870 |
| Cow position: | chr28:15350032-15349894 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 126, 54 |
Show alignments to all cow chromosomes.