Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 292-678 |
| Cow position: | chr29:31960636-31960240 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 60 |
| Conread position: | 298-641 |
| Cow position: | chr29:36300008-36299693 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 265, 22 |
| Conread position: | 300-625 |
| Cow position: | chr29:12955124-12955436 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 306-644 |
| Cow position: | chr29:44419525-44419188 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 319-648 |
| Cow position: | chr29:9097192-9096855 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 328-661 |
| Cow position: | chr29:39576486-39576816 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 333-687 |
| Cow position: | chr29:33128884-33128523 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 468-661 |
| Cow position: | chr29:23541319-23541514 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 470-661 |
| Cow position: | chr29:4336063-4335869 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 477-673 |
| Cow position: | chr29:45466896-45466696 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 510-661 |
| Cow position: | chr29:323854-324007 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 512-660 |
| Cow position: | chr29:19616352-19616500 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 143, 83 |
| Conread position: | 512-665 |
| Cow position: | chr29:31377290-31377137 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 517-649 |
| Cow position: | chr29:16350974-16351108 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 525-644 |
| Cow position: | chr29:24082395-24082279 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 701-876 |
| Cow position: | chr29:35037330-35037161 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 111, 12 |
| Conread position: | 703-866 |
| Cow position: | chr29:16360221-16360058 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 730-864 |
| Cow position: | chr29:18361117-18361252 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.