Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 292-635 |
| Cow position: | chr6:44900596-44900254 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 329-660 |
| Cow position: | chr6:31257201-31256877 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 344-644 |
| Cow position: | chr6:21583635-21583944 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 20, 73 |
| Conread position: | 353-661 |
| Cow position: | chr6:65399325-65399647 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 50 |
| Conread position: | 399-661 |
| Cow position: | chr6:37735840-37735574 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 412-650 |
| Cow position: | chr6:37392667-37392916 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 413-661 |
| Cow position: | chr6:56076184-56076446 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 470-685 |
| Cow position: | chr6:68307903-68308116 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 31 |
| Conread position: | 472-648 |
| Cow position: | chr6:15386145-15386323 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 37 |
| Conread position: | 476-632 |
| Cow position: | chr6:40172775-40172928 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 477-643 |
| Cow position: | chr6:19472747-19472582 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 477-663 |
| Cow position: | chr6:21349419-21349232 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 477-687 |
| Cow position: | chr6:38996104-38996310 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 478-648 |
| Cow position: | chr6:7127897-7128066 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 478-661 |
| Cow position: | chr6:57397719-57397536 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 480-663 |
| Cow position: | chr6:26010647-26010830 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 496-661 |
| Cow position: | chr6:24704163-24703996 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 506-661 |
| Cow position: | chr6:35241166-35241323 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 506-661 |
| Cow position: | chr6:39791779-39791623 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 508-648 |
| Cow position: | chr6:49968683-49968541 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 512-649 |
| Cow position: | chr6:30928649-30928788 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 514-649 |
| Cow position: | chr6:24089164-24089300 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 515-648 |
| Cow position: | chr6:1908405-1908541 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 698-876 |
| Cow position: | chr6:50502235-50502057 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 117, 15 |
| Conread position: | 703-869 |
| Cow position: | chr6:35697777-35697946 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 709-864 |
| Cow position: | chr6:55398430-55398273 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 729-864 |
| Cow position: | chr6:53416343-53416479 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.