Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055J03.5 |
| Conread position: | 255-643 |
| Cow position: | chr9:38419848-38419471 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 262-649 |
| Cow position: | chr9:34214685-34215070 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 263-650 |
| Cow position: | chr9:43194727-43194332 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 274-661 |
| Cow position: | chr9:43319537-43319924 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 298-649 |
| Cow position: | chr9:19594392-19594048 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 26 |
| Conread position: | 298-649 |
| Cow position: | chr9:19709722-19710071 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 305-664 |
| Cow position: | chr9:27368514-27368845 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 309-649 |
| Cow position: | chr9:23429309-23428967 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 312-649 |
| Cow position: | chr9:49150273-49150618 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 34, 65 |
| Conread position: | 316-620 |
| Cow position: | chr9:17354591-17354905 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 363-661 |
| Cow position: | chr9:19535184-19535486 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 106, 50 |
| Conread position: | 469-651 |
| Cow position: | chr9:21688973-21689156 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 469-661 |
| Cow position: | chr9:16210481-16210286 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 472-661 |
| Cow position: | chr9:54919443-54919638 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 478-661 |
| Cow position: | chr9:50345019-50344835 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 30 |
| Conread position: | 505-665 |
| Cow position: | chr9:23837420-23837257 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 510-649 |
| Cow position: | chr9:14211043-14210902 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 510-661 |
| Cow position: | chr9:39200130-39199975 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 512-649 |
| Cow position: | chr9:32606761-32606626 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 516-661 |
| Cow position: | chr9:55019199-55019051 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 516-664 |
| Cow position: | chr9:33002464-33002320 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 519-655 |
| Cow position: | chr9:57793265-57793402 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 705-864 |
| Cow position: | chr9:34763427-34763269 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 706-864 |
| Cow position: | chr9:39994331-39994174 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 730-870 |
| Cow position: | chr9:4834440-4834580 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 101 |
| Conread position: | 730-876 |
| Cow position: | chr9:8234065-8234212 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.