Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 3-548
Cow position:
Alignm length: 551
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 37

Conread position: 33-520
Cow position:
Alignm length: 501
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 52-548
Cow position:
Alignm length: 505
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 59

Conread position: 73-519
Cow position:
Alignm length: 453
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 42

Conread position: 73-520
Cow position:
Alignm length: 453
Alignm identity: 288
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 43

Conread position: 74-520
Cow position:
Alignm length: 455
Alignm identity: 297
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 41

Conread position: 178-508
Cow position:
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 106

Conread position: 181-520
Cow position:
Alignm length: 345
Alignm identity: 226
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 62, 109

Conread position: 188-501
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 189-520
Cow position:
Alignm length: 337
Alignm identity: 219
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 54, 88

Conread position: 189-520
Cow position:
Alignm length: 337
Alignm identity: 218
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 54, 88

Conread position: 210-495
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 84

Conread position: 212-509
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 43

Conread position: 215-509
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 13

Conread position: 221-548
Cow position:
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 72

Conread position: 224-509
Cow position:
Alignm length: 297
Alignm identity: 192
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 283

Conread position: 230-460
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 42

Conread position: 230-513
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 37

Conread position: 230-548
Cow position:
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 38

Conread position: 232-508
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 35

Conread position: 233-509
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 78, 30

Conread position: 233-509
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 233-513
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 234-504
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 21

Conread position: 236-514
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 17, 33

Conread position: 236-562
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 254-506
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 49, 36

Conread position: 271-547
Cow position:
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 118

Conread position: 337-535
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 84, 117

Conread position: 343-520
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 344-530
Cow position:
Alignm length: 188
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 361-534
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 387-548
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 391-548
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 417-548
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 566-1403
Cow position:
Alignm length: 876
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 54

Conread position: 610-1150
Cow position:
Alignm length: 559
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 650-1083
Cow position:
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 14

Conread position: 650-1393
Cow position:
Alignm length: 763
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 13

Conread position: 650-1403
Cow position:
Alignm length: 776
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 14

Conread position: 650-1403
Cow position:
Alignm length: 775
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 14

Conread position: 656-1326
Cow position:
Alignm length: 705
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 659-1063
Cow position:
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 664-972
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 664-1062
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 46

Conread position: 668-1341
Cow position:
Alignm length: 698
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 321

Conread position: 670-1084
Cow position:
Alignm length: 424
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 25

Conread position: 670-1400
Cow position:
Alignm length: 752
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 678-1330
Cow position:
Alignm length: 680
Alignm identity: 426
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 51, 29

Conread position: 678-1403
Cow position:
Alignm length: 753
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 278

Conread position: 686-1403
Cow position:
Alignm length: 744
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 320

Conread position: 704-960
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1291
Cow position:
Alignm length: 612
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1291
Cow position:
Alignm length: 610
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 576

Conread position: 704-1400
Cow position:
Alignm length: 723
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 711-1026
Cow position:
Alignm length: 316
Alignm identity: 193
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 113, 0

Conread position: 712-1403
Cow position:
Alignm length: 709
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 18

Conread position: 725-1403
Cow position:
Alignm length: 698
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 132

Conread position: 737-1385
Cow position:
Alignm length: 670
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 73

Conread position: 740-970
Cow position:
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 40

Conread position: 740-1050
Cow position:
Alignm length: 318
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 230, 107

Conread position: 740-1403
Cow position:
Alignm length: 680
Alignm identity: 426
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 295, 24

Conread position: 741-1398
Cow position:
Alignm length: 678
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 21

Conread position: 741-1400
Cow position:
Alignm length: 704
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 561

Conread position: 744-1403
Cow position:
Alignm length: 682
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 42

Conread position: 755-938
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 113

Conread position: 756-1382
Cow position:
Alignm length: 639
Alignm identity: 383
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 115

Conread position: 766-1376
Cow position:
Alignm length: 629
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 522

Conread position: 768-1195
Cow position:
Alignm length: 444
Alignm identity: 285
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 26

Conread position: 779-888
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 779-1397
Cow position:
Alignm length: 635
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 259

Conread position: 779-1397
Cow position:
Alignm length: 639
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 305

Conread position: 779-1403
Cow position:
Alignm length: 645
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 542

Conread position: 779-1403
Cow position:
Alignm length: 644
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 230

Conread position: 825-1403
Cow position:
Alignm length: 595
Alignm identity: 382
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 33, 17

Conread position: 826-1403
Cow position:
Alignm length: 601
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 146

Conread position: 837-1403
Cow position:
Alignm length: 588
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 271

Conread position: 839-1385
Cow position:
Alignm length: 564
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 31

Conread position: 849-1402
Cow position:
Alignm length: 565
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 144

Conread position: 854-1397
Cow position:
Alignm length: 565
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 860-1400
Cow position:
Alignm length: 564
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 214

Conread position: 863-1403
Cow position:
Alignm length: 549
Alignm identity: 347
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 7

Conread position: 924-1331
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 12, 30

Conread position: 925-1403
Cow position:
Alignm length: 505
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 996-1403
Cow position:
Alignm length: 415
Alignm identity: 259
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 83

Conread position: 999-1403
Cow position:
Alignm length: 426
Alignm identity: 273
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 130

Conread position: 1011-1385
Cow position:
Alignm length: 391
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 263

Conread position: 1025-1198
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 129, 21

Conread position: 1026-1402
Cow position:
Alignm length: 382
Alignm identity: 241
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 81

Conread position: 1050-1404
Cow position:
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 1055-1400
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 215

Conread position: 1059-1402
Cow position:
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 19

Conread position: 1062-1400
Cow position:
Alignm length: 354
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 211

Conread position: 1093-1403
Cow position:
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 130

Conread position: 1098-1403
Cow position:
Alignm length: 331
Alignm identity: 224
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 1102-1400
Cow position:
Alignm length: 313
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1124-1385
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 142

Conread position: 1158-1384
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 148

Conread position: 1161-1400
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 1165-1395
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 1169-1403
Cow position:
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1178-1402
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 138

Conread position: 1181-1372
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 95

Conread position: 1184-1403
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 77

Conread position: 1197-1403
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 137

Conread position: 1233-1403
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 12

Conread position: 1234-1403
Cow position:
Alignm length: 178
Alignm identity: 147
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 106, 5

Conread position: 1236-1396
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1241-1403
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 1246-1403
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1294-1403
Cow position:
Alignm length: 110
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.