Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 30-545 |
| Cow position: | chr13:34935649-34936175 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 81 |
| Conread position: | 33-520 |
| Cow position: | chr13:21841427-21840937 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 41 |
| Conread position: | 33-520 |
| Cow position: | chr13:32987263-32986783 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 322 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 33-548 |
| Cow position: | chr13:31735302-31734785 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 38-520 |
| Cow position: | chr13:35029304-35029788 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 52-548 |
| Cow position: | chr13:20543504-20543048 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 21 |
| Conread position: | 57-361 |
| Cow position: | chr13:54283470-54283772 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 74-520 |
| Cow position: | chr13:30245917-30245467 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 74-548 |
| Cow position: | chr13:50108300-50108775 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 86-520 |
| Cow position: | chr13:675788-676226 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 95-520 |
| Cow position: | chr13:2389965-2389537 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 98-520 |
| Cow position: | chr13:4871912-4872337 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 98-520 |
| Cow position: | chr13:49972548-49972974 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 98-548 |
| Cow position: | chr13:53833604-53834059 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 154-504 |
| Cow position: | chr13:2297898-2297549 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 89, 137 |
| Conread position: | 164-520 |
| Cow position: | chr13:3059325-3058976 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 155, 54 |
| Conread position: | 164-520 |
| Cow position: | chr13:17307392-17307744 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 126 |
| Conread position: | 178-497 |
| Cow position: | chr13:35756187-35756504 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 190-520 |
| Cow position: | chr13:51763555-51763887 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 214-482 |
| Cow position: | chr13:61951181-61951442 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 215-497 |
| Cow position: | chr13:15925395-15925114 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-509 |
| Cow position: | chr13:15542455-15542747 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 230-485 |
| Cow position: | chr13:41593896-41594150 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 230-509 |
| Cow position: | chr13:34143626-34143353 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 230-514 |
| Cow position: | chr13:13046789-13046514 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 230-544 |
| Cow position: | chr13:33825726-33825412 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-548 |
| Cow position: | chr13:34692192-34692504 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-548 |
| Cow position: | chr13:62328561-62328250 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 233-497 |
| Cow position: | chr13:9043534-9043801 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 233-508 |
| Cow position: | chr13:31613335-31613055 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 233-509 |
| Cow position: | chr13:33928506-33928240 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 233-548 |
| Cow position: | chr13:30657934-30657632 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 246-509 |
| Cow position: | chr13:34043343-34043081 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 284-509 |
| Cow position: | chr13:1594104-1593874 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 295-520 |
| Cow position: | chr13:34867809-34868030 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 296-548 |
| Cow position: | chr13:34187614-34187367 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 321-565 |
| Cow position: | chr13:34326598-34326356 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 217, 98 |
| Conread position: | 322-509 |
| Cow position: | chr13:32544046-32544235 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 322-509 |
| Cow position: | chr13:33337226-33337041 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 347-548 |
| Cow position: | chr13:2909312-2909111 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-548 |
| Cow position: | chr13:3276285-3276488 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 349-632 |
| Cow position: | chr13:48356451-48356721 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 238, 26 |
| Conread position: | 357-544 |
| Cow position: | chr13:4940215-4940401 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 141, 28 |
| Conread position: | 361-508 |
| Cow position: | chr13:44184915-44184770 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 73 |
| Conread position: | 361-520 |
| Cow position: | chr13:47859471-47859631 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 364-548 |
| Cow position: | chr13:31831756-31831940 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-548 |
| Cow position: | chr13:58716153-58716313 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 409-548 |
| Cow position: | chr13:54283772-54283911 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 549-1008 |
| Cow position: | chr13:26844023-26844461 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 34 |
| Conread position: | 549-1403 |
| Cow position: | chr13:34937404-34938252 (view UCSC Genome Browser custom track) |
| Alignm length: | 880 |
| Alignm identity: | 638 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 42 |
| Conread position: | 549-1404 |
| Cow position: | chr13:20542134-20541257 (view UCSC Genome Browser custom track) |
| Alignm length: | 887 |
| Alignm identity: | 652 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 49 |
| Conread position: | 552-1399 |
| Cow position: | chr13:43983167-43982315 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 45 |
| Conread position: | 559-1147 |
| Cow position: | chr13:28672295-28671700 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 388 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 560-1124 |
| Cow position: | chr13:27922303-27921737 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 568-1149 |
| Cow position: | chr13:34048558-34049148 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 568-1401 |
| Cow position: | chr13:31556786-31555957 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 578-1051 |
| Cow position: | chr13:19413169-19413627 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 598-1400 |
| Cow position: | chr13:47230043-47229220 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 599-1234 |
| Cow position: | chr13:22185278-22184647 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 433 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 617-970 |
| Cow position: | chr13:46731751-46731394 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 53, 165 |
| Conread position: | 623-822 |
| Cow position: | chr13:34766893-34766682 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 623-837 |
| Cow position: | chr13:48357542-48357768 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 45, 181 |
| Conread position: | 625-1403 |
| Cow position: | chr13:3654323-3653532 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 23 |
| Conread position: | 627-955 |
| Cow position: | chr13:11064185-11063858 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 45, 81 |
| Conread position: | 634-1060 |
| Cow position: | chr13:2582654-2582233 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 108, 18 |
| Conread position: | 650-1403 |
| Cow position: | chr13:4483819-4484581 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 650-1403 |
| Cow position: | chr13:30303301-30304071 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 268, 14 |
| Conread position: | 664-961 |
| Cow position: | chr13:21131967-21132272 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 664-1030 |
| Cow position: | chr13:3058081-3057714 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 664-1098 |
| Cow position: | chr13:13324778-13325207 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 46 |
| Conread position: | 664-1247 |
| Cow position: | chr13:31734056-31733455 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 664-1389 |
| Cow position: | chr13:23003277-23002524 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 664-1399 |
| Cow position: | chr13:30244649-30243898 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 665-1219 |
| Cow position: | chr13:35757271-35757849 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 666-1065 |
| Cow position: | chr13:27652641-27653036 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 72, 45 |
| Conread position: | 670-1055 |
| Cow position: | chr13:4941126-4941512 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 670-1403 |
| Cow position: | chr13:6668082-6667346 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 500 |
| Conread position: | 670-1403 |
| Cow position: | chr13:15924346-15923592 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 671-1084 |
| Cow position: | chr13:9044539-9044960 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 675-913 |
| Cow position: | chr13:2296780-2296542 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 677-1400 |
| Cow position: | chr13:49973725-49974461 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 678-1062 |
| Cow position: | chr13:33336379-33335993 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 679-1403 |
| Cow position: | chr13:1593112-1592367 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 604 |
| Conread position: | 680-925 |
| Cow position: | chr13:22766066-22766318 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 39, 217 |
| Conread position: | 682-1123 |
| Cow position: | chr13:34042325-34041875 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 293 |
| Conread position: | 683-1242 |
| Cow position: | chr13:35030594-35031164 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 689-1403 |
| Cow position: | chr13:50109515-50110238 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 704-1049 |
| Cow position: | chr13:22831617-22831269 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 178, 11 |
| Conread position: | 704-1400 |
| Cow position: | chr13:2388752-2388030 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 581 |
| Conread position: | 704-1400 |
| Cow position: | chr13:60466403-60467111 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 67 |
| Conread position: | 711-949 |
| Cow position: | chr13:29202280-29202040 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 163 |
| Conread position: | 712-1145 |
| Cow position: | chr13:30656899-30656466 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 79 |
| Conread position: | 712-1402 |
| Cow position: | chr13:30238326-30239023 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 154 |
| Conread position: | 715-1147 |
| Cow position: | chr13:34386583-34386149 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 715-1403 |
| Cow position: | chr13:32737741-32737036 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 75 |
| Conread position: | 717-1403 |
| Cow position: | chr13:34325478-34324771 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 351 |
| Conread position: | 732-1403 |
| Cow position: | chr13:15520399-15519719 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 22 |
| Conread position: | 740-970 |
| Cow position: | chr13:57573819-57573589 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 112 |
| Conread position: | 740-1218 |
| Cow position: | chr13:43855755-43856256 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 183, 70 |
| Conread position: | 740-1400 |
| Cow position: | chr13:17308577-17309257 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 51 |
| Conread position: | 740-1400 |
| Cow position: | chr13:21840096-21839414 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 540 |
| Conread position: | 740-1400 |
| Cow position: | chr13:32985244-32984566 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 0 |
| Conread position: | 740-1400 |
| Cow position: | chr13:58118805-58118125 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 14 |
| Conread position: | 740-1403 |
| Cow position: | chr13:31612200-31611519 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 337 |
| Conread position: | 740-1403 |
| Cow position: | chr13:32545485-32546168 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 0 |
| Conread position: | 741-1403 |
| Cow position: | chr13:15451001-15450343 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 12 |
| Conread position: | 742-993 |
| Cow position: | chr13:34911053-34910806 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 742-1113 |
| Cow position: | chr13:34868853-34869229 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 139 |
| Conread position: | 742-1403 |
| Cow position: | chr13:57023812-57024485 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 743-1150 |
| Cow position: | chr13:41315964-41316378 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 744-1403 |
| Cow position: | chr13:29227849-29227199 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 424 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 745-1093 |
| Cow position: | chr13:676970-677337 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 776-1400 |
| Cow position: | chr13:13900010-13900653 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 143 |
| Conread position: | 810-1050 |
| Cow position: | chr13:5625901-5625662 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 139, 74 |
| Conread position: | 831-972 |
| Cow position: | chr13:11799526-11799385 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 831-1042 |
| Cow position: | chr13:18331607-18331824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 838-969 |
| Cow position: | chr13:48357828-48357959 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 859-1150 |
| Cow position: | chr13:12063728-12063430 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 918-1403 |
| Cow position: | chr13:16255095-16254596 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 939-1183 |
| Cow position: | chr13:11798588-11798338 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 946-1403 |
| Cow position: | chr13:46101650-46102118 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 947-1403 |
| Cow position: | chr13:30277936-30278404 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 984-1384 |
| Cow position: | chr13:42218563-42218144 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 50 |
| Conread position: | 986-1403 |
| Cow position: | chr13:34029769-34030198 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 990-1403 |
| Cow position: | chr13:60700299-60699872 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 996-1403 |
| Cow position: | chr13:47681888-47682304 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 1025-1403 |
| Cow position: | chr13:25692091-25692470 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 326 |
| Conread position: | 1030-1400 |
| Cow position: | chr13:3056735-3056351 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 243 |
| Conread position: | 1033-1404 |
| Cow position: | chr13:34910459-34910080 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 1040-1403 |
| Cow position: | chr13:5628395-5628029 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 1042-1403 |
| Cow position: | chr13:5625579-5625216 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 1043-1393 |
| Cow position: | chr13:41696278-41696639 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 1044-1343 |
| Cow position: | chr13:26775727-26776037 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 1046-1403 |
| Cow position: | chr13:26844464-26844807 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1048-1403 |
| Cow position: | chr13:19440988-19441352 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 101, 44 |
| Conread position: | 1051-1403 |
| Cow position: | chr13:4941811-4942172 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 195 |
| Conread position: | 1053-1403 |
| Cow position: | chr13:33335886-33335526 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 175 |
| Conread position: | 1055-1375 |
| Cow position: | chr13:19413914-19414224 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 94, 22 |
| Conread position: | 1055-1403 |
| Cow position: | chr13:6758408-6758756 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 93, 78 |
| Conread position: | 1056-1402 |
| Cow position: | chr13:14178407-14178052 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 1077-1385 |
| Cow position: | chr13:677467-677786 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 181 |
| Conread position: | 1077-1402 |
| Cow position: | chr13:58263219-58263555 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 1081-1400 |
| Cow position: | chr13:34424213-34424546 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 193 |
| Conread position: | 1082-1403 |
| Cow position: | chr13:9045238-9045556 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 1094-1400 |
| Cow position: | chr13:28670795-28670478 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1103-1389 |
| Cow position: | chr13:34765972-34765685 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 138 |
| Conread position: | 1109-1400 |
| Cow position: | chr13:52646396-52646091 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 165 |
| Conread position: | 1118-1403 |
| Cow position: | chr13:34041845-34041549 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 239 |
| Conread position: | 1121-1365 |
| Cow position: | chr13:31730382-31730125 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 1155-1404 |
| Cow position: | chr13:48358242-48358484 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 30, 171 |
| Conread position: | 1170-1403 |
| Cow position: | chr13:34049293-34049525 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 9, 16 |
| Conread position: | 1178-1373 |
| Cow position: | chr13:47567779-47567971 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 163 |
| Conread position: | 1179-1403 |
| Cow position: | chr13:44653251-44653027 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 1182-1402 |
| Cow position: | chr13:17331196-17330977 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 1184-1403 |
| Cow position: | chr13:11798143-11797929 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 179 |
| Conread position: | 1196-1402 |
| Cow position: | chr13:38669960-38670165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 19 |
| Conread position: | 1196-1403 |
| Cow position: | chr13:35757852-35758060 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 1199-1403 |
| Cow position: | chr13:15543124-15543328 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 1205-1403 |
| Cow position: | chr13:8797198-8797004 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 50 |
| Conread position: | 1208-1391 |
| Cow position: | chr13:12633160-12633342 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 1208-1404 |
| Cow position: | chr13:30654789-30654592 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1209-1400 |
| Cow position: | chr13:21696844-21697036 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 1225-1404 |
| Cow position: | chr13:34154152-34153972 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 149 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1231-1403 |
| Cow position: | chr13:35031739-35031911 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1260-1403 |
| Cow position: | chr13:31733246-31733102 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1287-1403 |
| Cow position: | chr13:14402426-14402310 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1290-1403 |
| Cow position: | chr13:43590006-43590119 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 91 |
Show alignments to all cow chromosomes.