Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 6-548 |
| Cow position: | chr17:15369983-15370513 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 31-287 |
| Cow position: | chr17:3694872-3694628 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 33-508 |
| Cow position: | chr17:6119027-6119505 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 33-520 |
| Cow position: | chr17:15144483-15143994 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 319 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 113, 35 |
| Conread position: | 33-548 |
| Cow position: | chr17:43987403-43987914 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 41 |
| Conread position: | 38-300 |
| Cow position: | chr17:15416196-15416463 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 38-351 |
| Cow position: | chr17:14327402-14327091 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 102, 56 |
| Conread position: | 50-517 |
| Cow position: | chr17:248622-249077 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 309 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 73-520 |
| Cow position: | chr17:14218106-14217659 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 74-520 |
| Cow position: | chr17:8208027-8208476 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 87-520 |
| Cow position: | chr17:2261052-2261487 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 98-443 |
| Cow position: | chr17:15434894-15435243 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 98-520 |
| Cow position: | chr17:1383872-1383445 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 98-520 |
| Cow position: | chr17:9654510-9654083 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 98-520 |
| Cow position: | chr17:11782312-11782737 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 98-520 |
| Cow position: | chr17:22159855-22160282 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 159-422 |
| Cow position: | chr17:2250026-2249760 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 178-513 |
| Cow position: | chr17:40803465-40803785 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 179-508 |
| Cow position: | chr17:4059171-4059485 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 190-520 |
| Cow position: | chr17:6090085-6089753 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 198-509 |
| Cow position: | chr17:1878612-1878931 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 7, 176 |
| Conread position: | 215-504 |
| Cow position: | chr17:25736559-25736844 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 215-509 |
| Cow position: | chr17:18104591-18104292 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 218-513 |
| Cow position: | chr17:11088634-11088345 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 228-513 |
| Cow position: | chr17:13857676-13857396 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 230-508 |
| Cow position: | chr17:22430341-22430067 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 230-509 |
| Cow position: | chr17:55543-55271 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 230-509 |
| Cow position: | chr17:18187085-18186813 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-509 |
| Cow position: | chr17:20088754-20088485 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 230-509 |
| Cow position: | chr17:23857899-23857631 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 230-509 |
| Cow position: | chr17:44853784-44853510 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-516 |
| Cow position: | chr17:16889277-16889557 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 73, 30 |
| Conread position: | 230-548 |
| Cow position: | chr17:455739-455428 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-563 |
| Cow position: | chr17:35591375-35591687 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 233-493 |
| Cow position: | chr17:14893249-14893501 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 236-548 |
| Cow position: | chr17:1284628-1284320 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 175, 31 |
| Conread position: | 242-520 |
| Cow position: | chr17:1775408-1775137 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 244-488 |
| Cow position: | chr17:16860449-16860206 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 244-505 |
| Cow position: | chr17:32025043-32024788 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 247-504 |
| Cow position: | chr17:19270223-19269963 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 270-509 |
| Cow position: | chr17:1945344-1945580 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 321-520 |
| Cow position: | chr17:24780221-24780418 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 331-535 |
| Cow position: | chr17:31200860-31200657 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 334-509 |
| Cow position: | chr17:6258919-6259096 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 341-548 |
| Cow position: | chr17:3694457-3694249 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 343-519 |
| Cow position: | chr17:20024244-20024418 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 343-521 |
| Cow position: | chr17:20666531-20666353 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-527 |
| Cow position: | chr17:2146444-2146629 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 345-528 |
| Cow position: | chr17:2587548-2587729 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 347-531 |
| Cow position: | chr17:153228-153050 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 144, 88 |
| Conread position: | 347-548 |
| Cow position: | chr17:2286616-2286817 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 349-466 |
| Cow position: | chr17:20073333-20073215 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 349-525 |
| Cow position: | chr17:15417078-15417254 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-547 |
| Cow position: | chr17:4080873-4081067 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 352-548 |
| Cow position: | chr17:27345051-27345248 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 361-548 |
| Cow position: | chr17:14326231-14326052 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 361-555 |
| Cow position: | chr17:42263802-42263988 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 551-1390 |
| Cow position: | chr17:4082076-4082904 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 66 |
| Conread position: | 552-1403 |
| Cow position: | chr17:3708761-3707884 (view UCSC Genome Browser custom track) |
| Alignm length: | 891 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 215 |
| Conread position: | 559-1082 |
| Cow position: | chr17:42264948-42265465 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 355 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 559-1203 |
| Cow position: | chr17:18300370-18299703 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 567-1097 |
| Cow position: | chr17:14308029-14307488 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 343 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 567-1112 |
| Cow position: | chr17:11026774-11026211 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 373 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 570-1403 |
| Cow position: | chr17:1657799-1656957 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 608-1180 |
| Cow position: | chr17:15384360-15384940 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 609-1150 |
| Cow position: | chr17:21354169-21354719 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 338 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 617-928 |
| Cow position: | chr17:20488077-20488398 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 142 |
| Conread position: | 617-970 |
| Cow position: | chr17:12669996-12669637 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 650-1400 |
| Cow position: | chr17:14894286-14895046 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 14 |
| Conread position: | 664-862 |
| Cow position: | chr17:181500-181693 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 664-1106 |
| Cow position: | chr17:20665589-20665142 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 664-1384 |
| Cow position: | chr17:23324317-23323579 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 45 |
| Conread position: | 664-1400 |
| Cow position: | chr17:8209243-8210001 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 45 |
| Conread position: | 665-879 |
| Cow position: | chr17:25737801-25738018 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 665-965 |
| Cow position: | chr17:19269228-19268927 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 665-1403 |
| Cow position: | chr17:3642698-3641942 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 262 |
| Conread position: | 666-1402 |
| Cow position: | chr17:14040894-14040148 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 667-1376 |
| Cow position: | chr17:4603601-4604313 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 447 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 669-1385 |
| Cow position: | chr17:15143224-15142482 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 6 |
| Conread position: | 669-1393 |
| Cow position: | chr17:250301-251046 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 396 |
| Conread position: | 669-1403 |
| Cow position: | chr17:4060242-4060989 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 375 |
| Conread position: | 669-1404 |
| Cow position: | chr17:20087604-20086864 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 670-1048 |
| Cow position: | chr17:15850543-15850929 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 670-1358 |
| Cow position: | chr17:18103539-18102842 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 127 |
| Conread position: | 671-1403 |
| Cow position: | chr17:6068700-6069447 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 85 |
| Conread position: | 672-1403 |
| Cow position: | chr17:19019716-19020463 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 679-1403 |
| Cow position: | chr17:2579768-2580510 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 464 |
| Conread position: | 682-1403 |
| Cow position: | chr17:6259996-6260750 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 682-1403 |
| Cow position: | chr17:11087572-11086829 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 194 |
| Conread position: | 682-1403 |
| Cow position: | chr17:24029848-24029111 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 185 |
| Conread position: | 683-1403 |
| Cow position: | chr17:1880244-1880990 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 143 |
| Conread position: | 683-1403 |
| Cow position: | chr17:5226779-5227511 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 12 |
| Conread position: | 703-868 |
| Cow position: | chr17:24634127-24634292 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 703-1403 |
| Cow position: | chr17:40804997-40805702 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 242 |
| Conread position: | 704-1375 |
| Cow position: | chr17:14216852-14216171 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 704-1384 |
| Cow position: | chr17:24782341-24783034 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 704-1400 |
| Cow position: | chr17:15435965-15436682 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 576 |
| Conread position: | 704-1400 |
| Cow position: | chr17:31767865-31767151 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 711-1400 |
| Cow position: | chr17:2262283-2262995 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 571 |
| Conread position: | 712-827 |
| Cow position: | chr17:13856582-13856468 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 712-1288 |
| Cow position: | chr17:22132418-22133004 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 306 |
| Conread position: | 717-1387 |
| Cow position: | chr17:151684-151021 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 48 |
| Conread position: | 735-1400 |
| Cow position: | chr17:15324033-15324719 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 737-1225 |
| Cow position: | chr17:2092558-2092052 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 170 |
| Conread position: | 739-1390 |
| Cow position: | chr17:6076403-6077081 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 42 |
| Conread position: | 740-950 |
| Cow position: | chr17:43952353-43952143 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 740-1050 |
| Cow position: | chr17:11376574-11376257 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 740-1060 |
| Cow position: | chr17:20183649-20183957 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 740-1068 |
| Cow position: | chr17:13695776-13695447 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 227, 107 |
| Conread position: | 740-1197 |
| Cow position: | chr17:1382604-1382132 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 224 |
| Conread position: | 740-1385 |
| Cow position: | chr17:228098-227438 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 377 |
| Conread position: | 740-1398 |
| Cow position: | chr17:6119918-6120600 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 740-1400 |
| Cow position: | chr17:15156755-15156081 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 145 |
| Conread position: | 740-1400 |
| Cow position: | chr17:34156338-34157009 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 285 |
| Conread position: | 740-1403 |
| Cow position: | chr17:2030356-2031021 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 740-1403 |
| Cow position: | chr17:16857308-16856628 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 78 |
| Conread position: | 741-968 |
| Cow position: | chr17:38873833-38874058 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 111 |
| Conread position: | 742-920 |
| Cow position: | chr17:14051898-14051720 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 86, 48 |
| Conread position: | 742-1014 |
| Cow position: | chr17:2174101-2174362 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 752-1385 |
| Cow position: | chr17:14911242-14910596 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 408 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 754-1404 |
| Cow position: | chr17:18194055-18194705 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 219 |
| Conread position: | 791-1403 |
| Cow position: | chr17:20402670-20403311 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 275 |
| Conread position: | 824-1150 |
| Cow position: | chr17:9081146-9080813 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 841-1316 |
| Cow position: | chr17:6001134-6000640 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 854-1384 |
| Cow position: | chr17:11783171-11783712 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 421 |
| Conread position: | 857-1403 |
| Cow position: | chr17:2247741-2247177 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 144 |
| Conread position: | 861-1385 |
| Cow position: | chr17:43988831-43989374 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 406 |
| Conread position: | 870-1131 |
| Cow position: | chr17:25897364-25897626 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 108, 166 |
| Conread position: | 887-1279 |
| Cow position: | chr17:28018767-28019158 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 261, 87 |
| Conread position: | 915-1385 |
| Cow position: | chr17:24573042-24573513 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 108, 92 |
| Conread position: | 916-1403 |
| Cow position: | chr17:16899915-16899416 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 922-1403 |
| Cow position: | chr17:2168891-2169364 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 924-1370 |
| Cow position: | chr17:181694-182175 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 354 |
| Conread position: | 935-1197 |
| Cow position: | chr17:14238869-14239147 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 944-1403 |
| Cow position: | chr17:19268417-19267936 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 952-1403 |
| Cow position: | chr17:20081435-20080977 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 977-1403 |
| Cow position: | chr17:20100023-20099584 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 978-1238 |
| Cow position: | chr17:15371412-15371693 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 984-1403 |
| Cow position: | chr17:20488405-20488835 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 995-1263 |
| Cow position: | chr17:21417478-21417763 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 999-1404 |
| Cow position: | chr17:13705031-13705439 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 159 |
| Conread position: | 1003-1384 |
| Cow position: | chr17:3655818-3655421 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 273 |
| Conread position: | 1003-1403 |
| Cow position: | chr17:4942253-4941839 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 215 |
| Conread position: | 1030-1403 |
| Cow position: | chr17:38874145-38874524 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 85 |
| Conread position: | 1044-1402 |
| Cow position: | chr17:1787403-1787045 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 58 |
| Conread position: | 1051-1403 |
| Cow position: | chr17:15851219-15851580 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 233 |
| Conread position: | 1062-1275 |
| Cow position: | chr17:2174379-2174605 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 191 |
| Conread position: | 1098-1362 |
| Cow position: | chr17:14307276-14307002 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 1102-1403 |
| Cow position: | chr17:42265546-42265853 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 86, 230 |
| Conread position: | 1118-1280 |
| Cow position: | chr17:21780653-21780477 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 31, 155 |
| Conread position: | 1121-1385 |
| Cow position: | chr17:20722216-20722493 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 1149-1403 |
| Cow position: | chr17:13990713-13990457 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 1155-1400 |
| Cow position: | chr17:11025872-11025626 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 1161-1404 |
| Cow position: | chr17:54807-54564 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 12, 200 |
| Conread position: | 1161-1404 |
| Cow position: | chr17:31532874-31533113 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 1163-1384 |
| Cow position: | chr17:36548-36766 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 1172-1403 |
| Cow position: | chr17:14240159-14240391 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1181-1313 |
| Cow position: | chr17:22131136-22131270 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 1181-1330 |
| Cow position: | chr17:9080740-9080591 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 1185-1403 |
| Cow position: | chr17:1704018-1703800 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 51, 89 |
| Conread position: | 1201-1403 |
| Cow position: | chr17:16121830-16121651 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1209-1403 |
| Cow position: | chr17:9813194-9813389 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1211-1402 |
| Cow position: | chr17:8202671-8202857 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 1234-1401 |
| Cow position: | chr17:239067-239238 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1235-1400 |
| Cow position: | chr17:6611764-6611599 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 1245-1403 |
| Cow position: | chr17:15371960-15372118 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.