Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 33-520 |
| Cow position: | chr18:16077791-16078279 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 41 |
| Conread position: | 37-319 |
| Cow position: | chr18:43199388-43199667 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 37-518 |
| Cow position: | chr18:54001589-54002072 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 74-540 |
| Cow position: | chr18:11275951-11275491 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 74-548 |
| Cow position: | chr18:55089800-55089322 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 77-520 |
| Cow position: | chr18:19351508-19351951 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 89-520 |
| Cow position: | chr18:44620898-44621332 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 107-545 |
| Cow position: | chr18:29235956-29236399 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 312 |
| Conread position: | 123-520 |
| Cow position: | chr18:51659598-51660001 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 163-354 |
| Cow position: | chr18:33334894-33335086 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 163-520 |
| Cow position: | chr18:33954355-33953996 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 178-509 |
| Cow position: | chr18:23796917-23797247 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 178-509 |
| Cow position: | chr18:37504340-37504662 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 189-520 |
| Cow position: | chr18:23746730-23746398 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 190-520 |
| Cow position: | chr18:37586421-37586089 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 197-509 |
| Cow position: | chr18:28974604-28974301 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 215-504 |
| Cow position: | chr18:36507635-36507923 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-504 |
| Cow position: | chr18:40477452-40477735 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-509 |
| Cow position: | chr18:32651257-32651547 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-509 |
| Cow position: | chr18:41841522-41841229 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 227-509 |
| Cow position: | chr18:1520471-1520749 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 230-491 |
| Cow position: | chr18:54045242-54044987 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-544 |
| Cow position: | chr18:35334817-35335128 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-548 |
| Cow position: | chr18:2020568-2020256 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 230-548 |
| Cow position: | chr18:39747924-39748234 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-604 |
| Cow position: | chr18:33268208-33268575 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 233-509 |
| Cow position: | chr18:51257333-51257605 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 233-548 |
| Cow position: | chr18:43147588-43147281 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 233-562 |
| Cow position: | chr18:33358202-33358523 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 253-446 |
| Cow position: | chr18:52425025-52424834 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 255-562 |
| Cow position: | chr18:16660666-16660360 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 60 |
| Conread position: | 256-444 |
| Cow position: | chr18:52444628-52444442 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 271-548 |
| Cow position: | chr18:54172711-54172440 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 272-509 |
| Cow position: | chr18:53784864-53785101 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 322-504 |
| Cow position: | chr18:25349451-25349631 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 322-509 |
| Cow position: | chr18:16177209-16177010 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 343-537 |
| Cow position: | chr18:18896993-18897186 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 343-547 |
| Cow position: | chr18:29762911-29763113 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 168, 61 |
| Conread position: | 343-547 |
| Cow position: | chr18:45958131-45958328 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 344-548 |
| Cow position: | chr18:33335296-33335501 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 347-544 |
| Cow position: | chr18:30198107-30198304 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 347-562 |
| Cow position: | chr18:32293225-32293441 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 356-547 |
| Cow position: | chr18:43200236-43200423 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 361-624 |
| Cow position: | chr18:54024918-54024655 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 209, 17 |
| Conread position: | 363-548 |
| Cow position: | chr18:17993292-17993110 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 58, 118 |
| Conread position: | 364-509 |
| Cow position: | chr18:6869946-6869801 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-509 |
| Cow position: | chr18:48221373-48221496 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-509 |
| Cow position: | chr18:23944876-23944754 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-1399 |
| Cow position: | chr18:51660480-51661439 (view UCSC Genome Browser custom track) |
| Alignm length: | 966 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 286 |
| Conread position: | 591-1065 |
| Cow position: | chr18:15855667-15856145 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 322 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 599-1399 |
| Cow position: | chr18:16176336-16175518 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 613 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 80 |
| Conread position: | 607-900 |
| Cow position: | chr18:32260224-32259931 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 608-1403 |
| Cow position: | chr18:25363503-25364307 (view UCSC Genome Browser custom track) |
| Alignm length: | 817 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 146 |
| Conread position: | 615-1055 |
| Cow position: | chr18:8168990-8169448 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 619-1071 |
| Cow position: | chr18:29765254-29765735 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 650-1403 |
| Cow position: | chr18:40478723-40479490 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 583 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 14 |
| Conread position: | 651-1403 |
| Cow position: | chr18:41840483-41839702 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 13 |
| Conread position: | 659-1403 |
| Cow position: | chr18:30849338-30848569 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 659-1403 |
| Cow position: | chr18:33750350-33751112 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 660-1403 |
| Cow position: | chr18:16088493-16089238 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 49 |
| Conread position: | 665-1052 |
| Cow position: | chr18:37505409-37505801 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 128 |
| Conread position: | 665-1403 |
| Cow position: | chr18:14130735-14131495 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 666-1404 |
| Cow position: | chr18:33269175-33269924 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 669-1136 |
| Cow position: | chr18:27987414-27987890 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 459 |
| Conread position: | 670-1403 |
| Cow position: | chr18:14416329-14417087 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr18:32652556-32653319 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr18:36508686-36509444 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1404 |
| Cow position: | chr18:23798001-23798752 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 672-1403 |
| Cow position: | chr18:54171188-54170434 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 207 |
| Conread position: | 674-1403 |
| Cow position: | chr18:28973547-28972782 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 675-1385 |
| Cow position: | chr18:51342042-51342769 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 678-1401 |
| Cow position: | chr18:54023769-54023034 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 679-1403 |
| Cow position: | chr18:27837956-27837208 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 386 |
| Conread position: | 680-1403 |
| Cow position: | chr18:37557340-37558050 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 444 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 291, 31 |
| Conread position: | 682-992 |
| Cow position: | chr18:54003880-54004187 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 33, 125 |
| Conread position: | 682-1368 |
| Cow position: | chr18:33336222-33336933 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 288 |
| Conread position: | 682-1394 |
| Cow position: | chr18:25351108-25351849 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 335 |
| Conread position: | 682-1403 |
| Cow position: | chr18:52651279-52652014 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 694-1060 |
| Cow position: | chr18:16304112-16304486 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 703-1114 |
| Cow position: | chr18:22602868-22603284 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 704-1377 |
| Cow position: | chr18:51462697-51462013 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 704-1400 |
| Cow position: | chr18:19352764-19353458 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 704-1400 |
| Cow position: | chr18:33953193-33952482 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 711-1344 |
| Cow position: | chr18:55088535-55087882 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 573 |
| Conread position: | 712-1097 |
| Cow position: | chr18:51481231-51481622 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 125 |
| Conread position: | 712-1403 |
| Cow position: | chr18:29073420-29074093 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 721-1403 |
| Cow position: | chr18:54270913-54271596 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 145 |
| Conread position: | 722-1238 |
| Cow position: | chr18:24040329-24039788 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 8 |
| Conread position: | 740-839 |
| Cow position: | chr18:49671216-49671314 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 740-1400 |
| Cow position: | chr18:11274688-11274008 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 540 |
| Conread position: | 741-1087 |
| Cow position: | chr18:22385120-22385464 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 158 |
| Conread position: | 741-1403 |
| Cow position: | chr18:51238719-51239388 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 140 |
| Conread position: | 743-1401 |
| Cow position: | chr18:51276577-51275940 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 746-1380 |
| Cow position: | chr18:29047494-29046874 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 409 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 754-1382 |
| Cow position: | chr18:33141690-33142333 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 398 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 139, 88 |
| Conread position: | 768-1086 |
| Cow position: | chr18:55991290-55990984 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 192, 49 |
| Conread position: | 781-1400 |
| Cow position: | chr18:16079136-16079766 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 792-1066 |
| Cow position: | chr18:36256748-36256478 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 214, 70 |
| Conread position: | 799-1403 |
| Cow position: | chr18:19406068-19405468 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 825-1362 |
| Cow position: | chr18:29746598-29746069 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 345 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 153, 21 |
| Conread position: | 826-1393 |
| Cow position: | chr18:51275530-51274952 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 408 |
| Conread position: | 863-1384 |
| Cow position: | chr18:18496490-18495951 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 343 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 869-1361 |
| Cow position: | chr18:37527174-37527663 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 109, 128 |
| Conread position: | 871-1225 |
| Cow position: | chr18:52600077-52600446 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 871-1225 |
| Cow position: | chr18:56018319-56018680 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 875-1403 |
| Cow position: | chr18:40081840-40081309 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 116, 44 |
| Conread position: | 910-1402 |
| Cow position: | chr18:4946671-4947155 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 912-1156 |
| Cow position: | chr18:46854899-46854653 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 916-1402 |
| Cow position: | chr18:25961823-25961319 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 326 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 919-1403 |
| Cow position: | chr18:39077951-39078439 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 59, 96 |
| Conread position: | 929-1275 |
| Cow position: | chr18:17673984-17673636 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 939-1403 |
| Cow position: | chr18:29237564-29238006 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 955-1151 |
| Cow position: | chr18:1209333-1209532 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 967-1403 |
| Cow position: | chr18:21095880-21096311 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 983-1403 |
| Cow position: | chr18:17197744-17197310 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 141 |
| Conread position: | 990-1326 |
| Cow position: | chr18:40725984-40725629 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 991-1200 |
| Cow position: | chr18:56035531-56035750 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 1025-1404 |
| Cow position: | chr18:37489257-37489619 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 195, 49 |
| Conread position: | 1042-1150 |
| Cow position: | chr18:22869601-22869493 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1051-1403 |
| Cow position: | chr18:37506697-37507063 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1093-1403 |
| Cow position: | chr18:36256119-36255804 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 60 |
| Conread position: | 1102-1403 |
| Cow position: | chr18:32768446-32768759 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 49, 260 |
| Conread position: | 1102-1403 |
| Cow position: | chr18:51481674-51481986 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 1115-1355 |
| Cow position: | chr18:54086269-54086018 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 212 |
| Conread position: | 1155-1403 |
| Cow position: | chr18:16869280-16869522 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 1156-1403 |
| Cow position: | chr18:47742358-47742604 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 109, 76 |
| Conread position: | 1161-1400 |
| Cow position: | chr18:26245307-26245554 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 1161-1403 |
| Cow position: | chr18:27988046-27988293 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1167-1403 |
| Cow position: | chr18:15850309-15850532 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1170-1382 |
| Cow position: | chr18:18842732-18842521 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 1194-1403 |
| Cow position: | chr18:15856136-15856341 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 1207-1395 |
| Cow position: | chr18:54005266-54005078 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 1233-1404 |
| Cow position: | chr18:10648361-10648532 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1239-1403 |
| Cow position: | chr18:38343339-38343173 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 1266-1400 |
| Cow position: | chr18:45946882-45946748 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.