Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 1-345
Cow position:
Alignm length: 356
Alignm identity: 234
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 41, 116

Conread position: 38-280
Cow position:
Alignm length: 248
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 48-518
Cow position:
Alignm length: 481
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 63

Conread position: 86-520
Cow position:
Alignm length: 445
Alignm identity: 280
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 46, 29

Conread position: 86-520
Cow position:
Alignm length: 442
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 20

Conread position: 86-535
Cow position:
Alignm length: 457
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 98-520
Cow position:
Alignm length: 430
Alignm identity: 285
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 17

Conread position: 98-520
Cow position:
Alignm length: 434
Alignm identity: 280
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 26

Conread position: 98-527
Cow position:
Alignm length: 436
Alignm identity: 283
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 44, 17

Conread position: 98-548
Cow position:
Alignm length: 460
Alignm identity: 289
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 18

Conread position: 123-520
Cow position:
Alignm length: 406
Alignm identity: 265
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 29, 171

Conread position: 167-459
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 57

Conread position: 173-509
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 53

Conread position: 178-509
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 31

Conread position: 188-509
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 55, 102

Conread position: 189-520
Cow position:
Alignm length: 337
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 88

Conread position: 198-509
Cow position:
Alignm length: 316
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 30

Conread position: 200-548
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 302

Conread position: 206-509
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 19

Conread position: 215-509
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 13

Conread position: 224-354
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 230-474
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 37

Conread position: 230-509
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 37

Conread position: 230-518
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 42

Conread position: 230-548
Cow position:
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 230-562
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 233-509
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 102, 47

Conread position: 233-548
Cow position:
Alignm length: 322
Alignm identity: 220
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 52, 30

Conread position: 235-509
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 68, 37

Conread position: 236-490
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 31

Conread position: 236-513
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 31

Conread position: 269-548
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 238

Conread position: 272-548
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 274-509
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 280-547
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 12, 58

Conread position: 285-555
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 18, 191

Conread position: 308-555
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 173, 0

Conread position: 343-530
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 343-531
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 161, 172

Conread position: 344-489
Cow position:
Alignm length: 146
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 344-497
Cow position:
Alignm length: 154
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 344-508
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 347-561
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 185, 0

Conread position: 349-535
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 349-548
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 190, 0

Conread position: 352-597
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 180

Conread position: 362-548
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 136, 63

Conread position: 375-548
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 12

Conread position: 549-966
Cow position:
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 549-1218
Cow position:
Alignm length: 718
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 59

Conread position: 552-1398
Cow position:
Alignm length: 883
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 554-1367
Cow position:
Alignm length: 847
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 52

Conread position: 567-1012
Cow position:
Alignm length: 452
Alignm identity: 290
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 156, 65

Conread position: 571-1362
Cow position:
Alignm length: 821
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 35

Conread position: 572-926
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 22

Conread position: 583-1326
Cow position:
Alignm length: 773
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 617-1403
Cow position:
Alignm length: 829
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 329

Conread position: 617-1404
Cow position:
Alignm length: 813
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 623-1143
Cow position:
Alignm length: 539
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 172

Conread position: 631-1125
Cow position:
Alignm length: 520
Alignm identity: 342
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 258

Conread position: 650-1280
Cow position:
Alignm length: 657
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 28

Conread position: 650-1400
Cow position:
Alignm length: 774
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 14

Conread position: 650-1403
Cow position:
Alignm length: 777
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 14

Conread position: 659-1404
Cow position:
Alignm length: 770
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 157

Conread position: 662-1221
Cow position:
Alignm length: 582
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 664-1400
Cow position:
Alignm length: 756
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 45

Conread position: 665-1212
Cow position:
Alignm length: 568
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 113

Conread position: 666-1404
Cow position:
Alignm length: 769
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 6

Conread position: 667-1403
Cow position:
Alignm length: 756
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 15

Conread position: 669-1060
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 40

Conread position: 670-1237
Cow position:
Alignm length: 585
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1399
Cow position:
Alignm length: 751
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1399
Cow position:
Alignm length: 751
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 675-1054
Cow position:
Alignm length: 395
Alignm identity: 249
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 64

Conread position: 675-1400
Cow position:
Alignm length: 753
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 610

Conread position: 675-1403
Cow position:
Alignm length: 756
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 676-1224
Cow position:
Alignm length: 571
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 59

Conread position: 678-1403
Cow position:
Alignm length: 752
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 199

Conread position: 702-1399
Cow position:
Alignm length: 737
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 0

Conread position: 703-1403
Cow position:
Alignm length: 722
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 305

Conread position: 704-891
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1399
Cow position:
Alignm length: 731
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position:
Alignm length: 722
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 181

Conread position: 704-1400
Cow position:
Alignm length: 720
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 711-895
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 711-1403
Cow position:
Alignm length: 725
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 212

Conread position: 712-1048
Cow position:
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 22

Conread position: 713-1403
Cow position:
Alignm length: 707
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 67

Conread position: 721-1403
Cow position:
Alignm length: 702
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 52

Conread position: 740-1237
Cow position:
Alignm length: 519
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 0

Conread position: 740-1372
Cow position:
Alignm length: 643
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 24

Conread position: 740-1398
Cow position:
Alignm length: 700
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 211

Conread position: 749-1403
Cow position:
Alignm length: 676
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 120

Conread position: 754-1113
Cow position:
Alignm length: 365
Alignm identity: 231
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 237, 56

Conread position: 754-1400
Cow position:
Alignm length: 671
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 56

Conread position: 760-883
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 767-1079
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 26, 31

Conread position: 856-1403
Cow position:
Alignm length: 568
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 45

Conread position: 863-972
Cow position:
Alignm length: 110
Alignm identity: 95
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 870-1019
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 872-1063
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 5

Conread position: 877-1404
Cow position:
Alignm length: 539
Alignm identity: 348
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 146, 48

Conread position: 911-1361
Cow position:
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 433

Conread position: 913-1071
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 948-1384
Cow position:
Alignm length: 454
Alignm identity: 279
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 20, 47

Conread position: 965-1135
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 21

Conread position: 978-1403
Cow position:
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 45

Conread position: 984-1250
Cow position:
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 984-1404
Cow position:
Alignm length: 441
Alignm identity: 289
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 271

Conread position: 991-1400
Cow position:
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 992-1403
Cow position:
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 998-1349
Cow position:
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 1002-1259
Cow position:
Alignm length: 273
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 1003-1403
Cow position:
Alignm length: 422
Alignm identity: 290
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 18, 56

Conread position: 1005-1400
Cow position:
Alignm length: 414
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 272

Conread position: 1012-1383
Cow position:
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 22

Conread position: 1025-1250
Cow position:
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1026-1403
Cow position:
Alignm length: 379
Alignm identity: 251
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 127, 84

Conread position: 1033-1320
Cow position:
Alignm length: 300
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 66

Conread position: 1051-1384
Cow position:
Alignm length: 349
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 223

Conread position: 1054-1403
Cow position:
Alignm length: 365
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 1054-1403
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 186

Conread position: 1055-1403
Cow position:
Alignm length: 371
Alignm identity: 250
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 99, 243

Conread position: 1059-1403
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 27

Conread position: 1104-1349
Cow position:
Alignm length: 260
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 1161-1376
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 110

Conread position: 1161-1385
Cow position:
Alignm length: 227
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 75, 26

Conread position: 1161-1403
Cow position:
Alignm length: 248
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 132

Conread position: 1170-1403
Cow position:
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 1198-1401
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 38, 136

Conread position: 1201-1403
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 1202-1395
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 1207-1403
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 1221-1403
Cow position:
Alignm length: 185
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 40

Conread position: 1234-1384
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 21

Conread position: 1237-1403
Cow position:
Alignm length: 167
Alignm identity: 139
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 134, 0

Conread position: 1247-1403
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1251-1401
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 1261-1403
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 48

Conread position: 1269-1403
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1272-1404
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.