Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 1-345 |
| Cow position: | chr19:32224487-32224134 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 116 |
| Conread position: | 38-280 |
| Cow position: | chr19:27055131-27054885 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 48-518 |
| Cow position: | chr19:39687152-39687626 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 63 |
| Conread position: | 86-520 |
| Cow position: | chr19:684988-685431 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 280 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 86-520 |
| Cow position: | chr19:771758-772190 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 292 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 86-535 |
| Cow position: | chr19:52153103-52152650 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 98-520 |
| Cow position: | chr19:7341229-7341650 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 285 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 98-520 |
| Cow position: | chr19:32192735-32193162 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 98-527 |
| Cow position: | chr19:37056-37488 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 98-548 |
| Cow position: | chr19:494881-495336 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 123-520 |
| Cow position: | chr19:43142896-43143297 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 29, 171 |
| Conread position: | 167-459 |
| Cow position: | chr19:379177-378894 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 173-509 |
| Cow position: | chr19:894297-893960 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 53 |
| Conread position: | 178-509 |
| Cow position: | chr19:7487336-7487661 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 188-509 |
| Cow position: | chr19:32212815-32212493 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 55, 102 |
| Conread position: | 189-520 |
| Cow position: | chr19:26272164-26271832 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 198-509 |
| Cow position: | chr19:40853137-40852830 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 200-548 |
| Cow position: | chr19:33708-34054 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 302 |
| Conread position: | 206-509 |
| Cow position: | chr19:30371358-30371658 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 19 |
| Conread position: | 215-509 |
| Cow position: | chr19:33872546-33872844 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 224-354 |
| Cow position: | chr19:19179427-19179559 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 230-474 |
| Cow position: | chr19:31340202-31340440 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 230-509 |
| Cow position: | chr19:32238508-32238233 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-518 |
| Cow position: | chr19:32664890-32665176 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 230-548 |
| Cow position: | chr19:4253022-4252709 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 42 |
| Conread position: | 230-562 |
| Cow position: | chr19:801329-801657 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 233-509 |
| Cow position: | chr19:39389860-39390127 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 47 |
| Conread position: | 233-548 |
| Cow position: | chr19:29208906-29209215 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 235-509 |
| Cow position: | chr19:171544-171811 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 236-490 |
| Cow position: | chr19:4533424-4533173 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 236-513 |
| Cow position: | chr19:351222-350949 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 269-548 |
| Cow position: | chr19:27053474-27053190 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 238 |
| Conread position: | 272-548 |
| Cow position: | chr19:24748311-24748598 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 274-509 |
| Cow position: | chr19:10672953-10672706 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 280-547 |
| Cow position: | chr19:76864-76604 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 285-555 |
| Cow position: | chr19:260803-261070 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 308-555 |
| Cow position: | chr19:353241-353004 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 343-530 |
| Cow position: | chr19:20125092-20125273 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 343-531 |
| Cow position: | chr19:36476796-36476981 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 161, 172 |
| Conread position: | 344-489 |
| Cow position: | chr19:15952711-15952856 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-497 |
| Cow position: | chr19:55078185-55078338 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 344-508 |
| Cow position: | chr19:40888198-40888035 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 347-561 |
| Cow position: | chr19:1031566-1031782 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 349-535 |
| Cow position: | chr19:6552851-6553034 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 349-548 |
| Cow position: | chr19:32223978-32223781 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 352-597 |
| Cow position: | chr19:416108-416348 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 13, 180 |
| Conread position: | 362-548 |
| Cow position: | chr19:39546126-39546308 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 136, 63 |
| Conread position: | 375-548 |
| Cow position: | chr19:562240-562072 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 549-966 |
| Cow position: | chr19:352416-351999 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 549-1218 |
| Cow position: | chr19:39669277-39668576 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 59 |
| Conread position: | 552-1398 |
| Cow position: | chr19:32182846-32181979 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 554-1367 |
| Cow position: | chr19:27052269-27051440 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 567-1012 |
| Cow position: | chr19:189688-190119 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 290 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 156, 65 |
| Conread position: | 571-1362 |
| Cow position: | chr19:32203405-32204209 (view UCSC Genome Browser custom track) |
| Alignm length: | 821 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 572-926 |
| Cow position: | chr19:10514238-10513877 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 22 |
| Conread position: | 583-1326 |
| Cow position: | chr19:674980-674219 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 617-1403 |
| Cow position: | chr19:3138226-3139036 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 329 |
| Conread position: | 617-1404 |
| Cow position: | chr19:162809-162051 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 623-1143 |
| Cow position: | chr19:35980445-35980974 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 172 |
| Conread position: | 631-1125 |
| Cow position: | chr19:39095346-39095857 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 342 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 38, 258 |
| Conread position: | 650-1280 |
| Cow position: | chr19:893270-892620 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 28 |
| Conread position: | 650-1400 |
| Cow position: | chr19:39185201-39184435 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 14 |
| Conread position: | 650-1403 |
| Cow position: | chr19:33941955-33942713 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 14 |
| Conread position: | 659-1404 |
| Cow position: | chr19:439099-438331 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 157 |
| Conread position: | 662-1221 |
| Cow position: | chr19:172560-173133 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 664-1400 |
| Cow position: | chr19:52151481-52150731 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 45 |
| Conread position: | 665-1212 |
| Cow position: | chr19:7488663-7489229 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 113 |
| Conread position: | 666-1404 |
| Cow position: | chr19:75899-75154 (view UCSC Genome Browser custom track) |
| Alignm length: | 769 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 6 |
| Conread position: | 667-1403 |
| Cow position: | chr19:39390866-39391615 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 15 |
| Conread position: | 669-1060 |
| Cow position: | chr19:28593618-28594008 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 40 |
| Conread position: | 670-1237 |
| Cow position: | chr19:5729187-5729769 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1399 |
| Cow position: | chr19:28581303-28580562 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1399 |
| Cow position: | chr19:33873784-33874528 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 675-1054 |
| Cow position: | chr19:33444066-33443676 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 675-1400 |
| Cow position: | chr19:7342419-7343170 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 610 |
| Conread position: | 675-1403 |
| Cow position: | chr19:40887375-40886639 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 676-1224 |
| Cow position: | chr19:35385384-35384822 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 678-1403 |
| Cow position: | chr19:40852078-40851344 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 561 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 199 |
| Conread position: | 702-1399 |
| Cow position: | chr19:204347-205083 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 703-1403 |
| Cow position: | chr19:2273994-2273279 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 305 |
| Conread position: | 704-891 |
| Cow position: | chr19:5208558-5208745 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 704-1399 |
| Cow position: | chr19:32211687-32210962 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 704-1400 |
| Cow position: | chr19:772982-773701 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 181 |
| Conread position: | 704-1400 |
| Cow position: | chr19:43144102-43144816 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 711-895 |
| Cow position: | chr19:38288-38472 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 711-1403 |
| Cow position: | chr19:4386011-4386727 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 212 |
| Conread position: | 712-1048 |
| Cow position: | chr19:136607-136277 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 22 |
| Conread position: | 713-1403 |
| Cow position: | chr19:341621-342325 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 721-1403 |
| Cow position: | chr19:7069756-7070412 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 52 |
| Conread position: | 740-1237 |
| Cow position: | chr19:168178-167660 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 0 |
| Conread position: | 740-1372 |
| Cow position: | chr19:27037120-27036520 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 24 |
| Conread position: | 740-1398 |
| Cow position: | chr19:20105133-20105826 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 211 |
| Conread position: | 749-1403 |
| Cow position: | chr19:12773551-12774221 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 120 |
| Conread position: | 754-1113 |
| Cow position: | chr19:17019407-17019760 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 237, 56 |
| Conread position: | 754-1400 |
| Cow position: | chr19:5901058-5900399 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 56 |
| Conread position: | 760-883 |
| Cow position: | chr19:43541-43663 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 767-1079 |
| Cow position: | chr19:10956775-10956460 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 856-1403 |
| Cow position: | chr19:28406165-28405601 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 863-972 |
| Cow position: | chr19:50685239-50685346 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 870-1019 |
| Cow position: | chr19:40817168-40817022 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 872-1063 |
| Cow position: | chr19:35377926-35378123 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 96, 5 |
| Conread position: | 877-1404 |
| Cow position: | chr19:5653129-5652616 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 348 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 146, 48 |
| Conread position: | 911-1361 |
| Cow position: | chr19:53844169-53844651 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 433 |
| Conread position: | 913-1071 |
| Cow position: | chr19:38804-38965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 948-1384 |
| Cow position: | chr19:36264248-36263801 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 965-1135 |
| Cow position: | chr19:14212495-14212324 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 978-1403 |
| Cow position: | chr19:50723209-50723658 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 984-1250 |
| Cow position: | chr19:28567253-28566970 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 984-1404 |
| Cow position: | chr19:10509791-10509352 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 271 |
| Conread position: | 991-1400 |
| Cow position: | chr19:38973-39401 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 992-1403 |
| Cow position: | chr19:347642-347226 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 998-1349 |
| Cow position: | chr19:255913-256285 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 6 |
| Conread position: | 1002-1259 |
| Cow position: | chr19:40816879-40816607 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 1003-1403 |
| Cow position: | chr19:39699154-39699565 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 1005-1400 |
| Cow position: | chr19:32193705-32194117 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 272 |
| Conread position: | 1012-1383 |
| Cow position: | chr19:3112965-3113341 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 1025-1250 |
| Cow position: | chr19:39002344-39002105 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1026-1403 |
| Cow position: | chr19:10365651-10366010 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 84 |
| Conread position: | 1033-1320 |
| Cow position: | chr19:29140694-29140988 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 1051-1384 |
| Cow position: | chr19:28594291-28594638 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 223 |
| Conread position: | 1054-1403 |
| Cow position: | chr19:136046-135685 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 1054-1403 |
| Cow position: | chr19:9707386-9707027 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 186 |
| Conread position: | 1055-1403 |
| Cow position: | chr19:190119-190487 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 243 |
| Conread position: | 1059-1403 |
| Cow position: | chr19:5028321-5027963 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 1104-1349 |
| Cow position: | chr19:6548801-6549060 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1161-1376 |
| Cow position: | chr19:7069391-7069608 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 1161-1385 |
| Cow position: | chr19:34660231-34660007 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 1161-1403 |
| Cow position: | chr19:1588354-1588108 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 1170-1403 |
| Cow position: | chr19:7489216-7489451 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1198-1401 |
| Cow position: | chr19:35384709-35384509 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 136 |
| Conread position: | 1201-1403 |
| Cow position: | chr19:11522262-11522059 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1202-1395 |
| Cow position: | chr19:173137-173337 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1207-1403 |
| Cow position: | chr19:55926536-55926345 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1221-1403 |
| Cow position: | chr19:39667817-39667642 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 1234-1384 |
| Cow position: | chr19:167633-167482 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 1237-1403 |
| Cow position: | chr19:5729813-5729976 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 139 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 1247-1403 |
| Cow position: | chr19:1490076-1489923 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1251-1401 |
| Cow position: | chr19:35379544-35379691 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 1261-1403 |
| Cow position: | chr19:14233923-14234063 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 72, 48 |
| Conread position: | 1269-1403 |
| Cow position: | chr19:28366987-28367121 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1272-1404 |
| Cow position: | chr19:23376800-23376934 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.