Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 30-548
Cow position:
Alignm length: 527
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 38

Conread position: 31-548
Cow position:
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 66

Conread position: 31-562
Cow position:
Alignm length: 539
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 37

Conread position: 74-309
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 41

Conread position: 74-548
Cow position:
Alignm length: 484
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 41

Conread position: 98-497
Cow position:
Alignm length: 406
Alignm identity: 267
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 18

Conread position: 98-520
Cow position:
Alignm length: 433
Alignm identity: 275
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 23

Conread position: 119-548
Cow position:
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 123-505
Cow position:
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 163-509
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 135

Conread position: 178-497
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 18

Conread position: 178-548
Cow position:
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 206-520
Cow position:
Alignm length: 319
Alignm identity: 207
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 36

Conread position: 210-488
Cow position:
Alignm length: 284
Alignm identity: 187
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 24, 18

Conread position: 211-513
Cow position:
Alignm length: 309
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 17

Conread position: 215-509
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 13

Conread position: 217-509
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 86, 14

Conread position: 230-509
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 230-509
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 230-548
Cow position:
Alignm length: 322
Alignm identity: 233
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 55, 36

Conread position: 230-548
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 37

Conread position: 233-509
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 46

Conread position: 236-548
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 27

Conread position: 247-509
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 33

Conread position: 249-509
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 30

Conread position: 267-509
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 24

Conread position: 284-509
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 6

Conread position: 318-509
Cow position:
Alignm length: 192
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 334-509
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 338-520
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 349-535
Cow position:
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 539-1403
Cow position:
Alignm length: 875
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 70

Conread position: 541-1403
Cow position:
Alignm length: 907
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 6

Conread position: 552-1400
Cow position:
Alignm length: 893
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 56

Conread position: 567-1403
Cow position:
Alignm length: 859
Alignm identity: 531
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 32, 62

Conread position: 574-1052
Cow position:
Alignm length: 491
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 48

Conread position: 590-944
Cow position:
Alignm length: 364
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 42

Conread position: 599-1060
Cow position:
Alignm length: 476
Alignm identity: 312
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 33

Conread position: 607-1212
Cow position:
Alignm length: 646
Alignm identity: 412
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 18, 265

Conread position: 610-1351
Cow position:
Alignm length: 783
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 138

Conread position: 618-1063
Cow position:
Alignm length: 467
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 51

Conread position: 634-1403
Cow position:
Alignm length: 797
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 25

Conread position: 644-1403
Cow position:
Alignm length: 783
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 645-1403
Cow position:
Alignm length: 782
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 398

Conread position: 650-1403
Cow position:
Alignm length: 778
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 14

Conread position: 663-1403
Cow position:
Alignm length: 764
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 664-1400
Cow position:
Alignm length: 756
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 665-1065
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 306

Conread position: 665-1114
Cow position:
Alignm length: 461
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 216

Conread position: 665-1387
Cow position:
Alignm length: 744
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 304

Conread position: 666-1403
Cow position:
Alignm length: 762
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 331

Conread position: 670-958
Cow position:
Alignm length: 293
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 8

Conread position: 670-1054
Cow position:
Alignm length: 395
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1326
Cow position:
Alignm length: 680
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1403
Cow position:
Alignm length: 758
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1403
Cow position:
Alignm length: 755
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1403
Cow position:
Alignm length: 762
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 675-1089
Cow position:
Alignm length: 428
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 675-1114
Cow position:
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 29

Conread position: 678-1048
Cow position:
Alignm length: 390
Alignm identity: 253
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 51

Conread position: 679-1313
Cow position:
Alignm length: 656
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 134

Conread position: 682-842
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 682-1397
Cow position:
Alignm length: 737
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 90

Conread position: 684-1403
Cow position:
Alignm length: 739
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 42

Conread position: 692-876
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 27

Conread position: 704-1230
Cow position:
Alignm length: 549
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position:
Alignm length: 721
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 711-1400
Cow position:
Alignm length: 704
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 30

Conread position: 712-879
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 712-1084
Cow position:
Alignm length: 380
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 179

Conread position: 712-1403
Cow position:
Alignm length: 714
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 16

Conread position: 715-1352
Cow position:
Alignm length: 654
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 68

Conread position: 722-956
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 722-1403
Cow position:
Alignm length: 691
Alignm identity: 421
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 305, 13

Conread position: 737-1033
Cow position:
Alignm length: 303
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 69

Conread position: 740-1034
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 71

Conread position: 742-1286
Cow position:
Alignm length: 562
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 68

Conread position: 758-957
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 66

Conread position: 807-1403
Cow position:
Alignm length: 616
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 810-1052
Cow position:
Alignm length: 247
Alignm identity: 181
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 144, 159

Conread position: 817-1400
Cow position:
Alignm length: 605
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 146

Conread position: 828-1403
Cow position:
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 118

Conread position: 838-1403
Cow position:
Alignm length: 605
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 87

Conread position: 861-993
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 112

Conread position: 863-1403
Cow position:
Alignm length: 555
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 111

Conread position: 870-1403
Cow position:
Alignm length: 558
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 74

Conread position: 872-1403
Cow position:
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 293

Conread position: 877-1403
Cow position:
Alignm length: 550
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 902-1150
Cow position:
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 217

Conread position: 904-1403
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 72

Conread position: 947-1324
Cow position:
Alignm length: 408
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 150

Conread position: 968-1333
Cow position:
Alignm length: 382
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 307

Conread position: 972-1403
Cow position:
Alignm length: 454
Alignm identity: 310
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 149

Conread position: 980-1404
Cow position:
Alignm length: 445
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 309

Conread position: 984-1402
Cow position:
Alignm length: 443
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 115

Conread position: 1025-1387
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 223

Conread position: 1026-1403
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 1034-1403
Cow position:
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 233

Conread position: 1045-1403
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 72

Conread position: 1050-1403
Cow position:
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 198

Conread position: 1051-1403
Cow position:
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 309

Conread position: 1059-1403
Cow position:
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 1063-1384
Cow position:
Alignm length: 335
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1063-1402
Cow position:
Alignm length: 355
Alignm identity: 237
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 46

Conread position: 1093-1404
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 59, 142

Conread position: 1110-1315
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 117

Conread position: 1118-1403
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 166

Conread position: 1161-1403
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 114

Conread position: 1169-1402
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 48, 0

Conread position: 1180-1361
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 17, 11

Conread position: 1201-1403
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 33, 105

Conread position: 1209-1403
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 127

Conread position: 1234-1403
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 82

Conread position: 1236-1385
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 1270-1401
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.