Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 30-212 |
| Cow position: | chr23:1330894-1330710 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 38-548 |
| Cow position: | chr23:1026003-1025513 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 38-548 |
| Cow position: | chr23:4433475-4433986 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 30 |
| Conread position: | 47-326 |
| Cow position: | chr23:22880674-22880392 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 90, 64 |
| Conread position: | 47-520 |
| Cow position: | chr23:14975755-14975280 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 66-509 |
| Cow position: | chr23:2573357-2573786 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 74-519 |
| Cow position: | chr23:20301245-20301692 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 41 |
| Conread position: | 86-520 |
| Cow position: | chr23:19951538-19951103 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 98-509 |
| Cow position: | chr23:2314485-2314058 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 98-520 |
| Cow position: | chr23:31707058-31707485 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 123-487 |
| Cow position: | chr23:3375548-3375179 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 164-549 |
| Cow position: | chr23:28216419-28216802 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 38, 93 |
| Conread position: | 174-562 |
| Cow position: | chr23:3012830-3013197 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 178-497 |
| Cow position: | chr23:15176235-15176549 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 178-497 |
| Cow position: | chr23:15524796-15525115 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 178-509 |
| Cow position: | chr23:28912582-28912917 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 178-548 |
| Cow position: | chr23:19488702-19489071 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 53 |
| Conread position: | 203-505 |
| Cow position: | chr23:2027916-2027626 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 24 |
| Conread position: | 207-509 |
| Cow position: | chr23:22148077-22147773 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 218-509 |
| Cow position: | chr23:11777694-11777990 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 230-509 |
| Cow position: | chr23:5875519-5875247 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 230-509 |
| Cow position: | chr23:7269813-7270086 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 73, 37 |
| Conread position: | 230-513 |
| Cow position: | chr23:2525213-2524934 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 230-548 |
| Cow position: | chr23:2045267-2045580 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 164, 37 |
| Conread position: | 233-509 |
| Cow position: | chr23:36032142-36031866 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 234-509 |
| Cow position: | chr23:969397-969125 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 131, 53 |
| Conread position: | 236-509 |
| Cow position: | chr23:5780153-5779895 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 236-548 |
| Cow position: | chr23:31595932-31595627 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 31 |
| Conread position: | 242-544 |
| Cow position: | chr23:989386-989089 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 250-548 |
| Cow position: | chr23:810375-810670 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 290-497 |
| Cow position: | chr23:27398789-27398998 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 322-509 |
| Cow position: | chr23:4641307-4641116 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 338-535 |
| Cow position: | chr23:16482226-16482022 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 343-531 |
| Cow position: | chr23:16617496-16617317 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 170, 54 |
| Conread position: | 343-537 |
| Cow position: | chr23:19333068-19332875 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 115 |
| Conread position: | 347-497 |
| Cow position: | chr23:22879822-22879672 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-509 |
| Cow position: | chr23:2765984-2765839 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 393-548 |
| Cow position: | chr23:4276357-4276510 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 401-548 |
| Cow position: | chr23:8981412-8981265 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 524-1403 |
| Cow position: | chr23:26836781-26837623 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 567-1400 |
| Cow position: | chr23:2341243-2342082 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 570-1060 |
| Cow position: | chr23:15877605-15877116 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 130 |
| Conread position: | 589-967 |
| Cow position: | chr23:31595078-31594693 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 598-822 |
| Cow position: | chr23:22875137-22874914 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 606-1062 |
| Cow position: | chr23:7046476-7045990 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 319 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 607-899 |
| Cow position: | chr23:9545764-9546065 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 163 |
| Conread position: | 607-1083 |
| Cow position: | chr23:27169317-27169806 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 323 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 607-1403 |
| Cow position: | chr23:16615250-16614429 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 175 |
| Conread position: | 615-1052 |
| Cow position: | chr23:4752796-4753237 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 617-1403 |
| Cow position: | chr23:1402304-1401527 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 589 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 225 |
| Conread position: | 650-947 |
| Cow position: | chr23:22147006-22146715 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 650-999 |
| Cow position: | chr23:11778736-11779078 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 651-1403 |
| Cow position: | chr23:15177320-15178080 (view UCSC Genome Browser custom track) |
| Alignm length: | 768 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 13 |
| Conread position: | 657-1098 |
| Cow position: | chr23:3014638-3015089 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 661-895 |
| Cow position: | chr23:15525862-15526098 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 664-1071 |
| Cow position: | chr23:20302464-20302864 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 28 |
| Conread position: | 665-1084 |
| Cow position: | chr23:2757847-2758277 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 280 |
| Conread position: | 665-1403 |
| Cow position: | chr23:4640371-4639618 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 128 |
| Conread position: | 667-1152 |
| Cow position: | chr23:5874384-5873910 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 62 |
| Conread position: | 668-1403 |
| Cow position: | chr23:27399756-27400515 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 668-1404 |
| Cow position: | chr23:4888926-4889693 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 196 |
| Conread position: | 670-820 |
| Cow position: | chr23:30636040-30635890 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 670-895 |
| Cow position: | chr23:2574796-2575020 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 670-1047 |
| Cow position: | chr23:14965491-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1133 |
| Cow position: | chr23:967089-966614 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 670-1384 |
| Cow position: | chr23:20155953-20155230 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 8 |
| Conread position: | 670-1385 |
| Cow position: | chr23:28913654-28914384 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1399 |
| Cow position: | chr23:2716649-2717387 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr23:19489803-19490543 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr23:29452057-29451337 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 673-960 |
| Cow position: | chr23:25683784-25683489 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 237 |
| Conread position: | 675-1382 |
| Cow position: | chr23:4360084-4360794 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 193 |
| Conread position: | 675-1400 |
| Cow position: | chr23:19950329-19949595 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 675-1403 |
| Cow position: | chr23:15219637-15218895 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 122 |
| Conread position: | 677-1400 |
| Cow position: | chr23:2312976-2312237 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 677-1403 |
| Cow position: | chr23:28217554-28218292 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 680-1083 |
| Cow position: | chr23:16616580-16616165 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 682-915 |
| Cow position: | chr23:2026852-2026608 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 682-1403 |
| Cow position: | chr23:4510344-4511061 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 148 |
| Conread position: | 703-1012 |
| Cow position: | chr23:17786034-17785721 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 703-1150 |
| Cow position: | chr23:31447103-31447557 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 704-1011 |
| Cow position: | chr23:4434748-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 704-1276 |
| Cow position: | chr23:23830255-23830843 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 712-1123 |
| Cow position: | chr23:2781910-2781501 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 163 |
| Conread position: | 715-1403 |
| Cow position: | chr23:36031069-36030370 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 75 |
| Conread position: | 735-949 |
| Cow position: | chr23:29141117-29141325 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 735-1121 |
| Cow position: | chr23:1024697-1024298 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 55 |
| Conread position: | 735-1403 |
| Cow position: | chr23:4817342-4818027 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 405 |
| Conread position: | 740-1325 |
| Cow position: | chr23:29647927-29647352 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 359 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 117, 132 |
| Conread position: | 740-1385 |
| Cow position: | chr23:14974232-14973575 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 133 |
| Conread position: | 740-1401 |
| Cow position: | chr23:14262193-14262855 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 740-1403 |
| Cow position: | chr23:2794904-2794249 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 34 |
| Conread position: | 741-1370 |
| Cow position: | chr23:14948409-14947776 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 64 |
| Conread position: | 742-1063 |
| Cow position: | chr23:22944228-22943907 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 228, 22 |
| Conread position: | 742-1144 |
| Cow position: | chr23:29403608-29403209 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 228, 105 |
| Conread position: | 746-1379 |
| Cow position: | chr23:13509995-13510633 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 779-1150 |
| Cow position: | chr23:28077737-28078109 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 83 |
| Conread position: | 779-1299 |
| Cow position: | chr23:28108026-28108555 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 142 |
| Conread position: | 779-1403 |
| Cow position: | chr23:28025033-28025666 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 339 |
| Conread position: | 779-1403 |
| Cow position: | chr23:28368155-28367525 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 8 |
| Conread position: | 781-1403 |
| Cow position: | chr23:27970906-27971537 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 330 |
| Conread position: | 783-1067 |
| Cow position: | chr23:31649573-31649291 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 798-1150 |
| Cow position: | chr23:4651068-4651423 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 810-1022 |
| Cow position: | chr23:22874787-22874581 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 59 |
| Conread position: | 810-1132 |
| Cow position: | chr23:7364338-7364650 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 827-1114 |
| Cow position: | chr23:3861311-3861015 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 178 |
| Conread position: | 829-1403 |
| Cow position: | chr23:619021-618458 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 38 |
| Conread position: | 839-1061 |
| Cow position: | chr23:16499021-16498793 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 130, 79 |
| Conread position: | 864-1404 |
| Cow position: | chr23:3880626-3880077 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 113 |
| Conread position: | 870-1067 |
| Cow position: | chr23:12887521-12887329 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 123, 10 |
| Conread position: | 879-1398 |
| Cow position: | chr23:3706586-3707124 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 18 |
| Conread position: | 886-1403 |
| Cow position: | chr23:2026610-2026074 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 405 |
| Conread position: | 910-1150 |
| Cow position: | chr23:2575463-2575692 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 912-1028 |
| Cow position: | chr23:38794702-38794822 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 946-1147 |
| Cow position: | chr23:29141547-29141756 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 965-1403 |
| Cow position: | chr23:17186277-17186723 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 984-1403 |
| Cow position: | chr23:11077638-11077201 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 58, 33 |
| Conread position: | 985-1150 |
| Cow position: | chr23:10157760-10157928 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 985-1401 |
| Cow position: | chr23:5903378-5902959 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 22 |
| Conread position: | 990-1403 |
| Cow position: | chr23:11779365-11779791 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 227 |
| Conread position: | 996-1398 |
| Cow position: | chr23:22146711-22146299 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 277 |
| Conread position: | 999-1403 |
| Cow position: | chr23:15526155-15526576 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1034-1252 |
| Cow position: | chr23:31594462-31594232 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 1042-1404 |
| Cow position: | chr23:11855519-11855896 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 278 |
| Conread position: | 1057-1398 |
| Cow position: | chr23:7336769-7337124 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 84 |
| Conread position: | 1057-1402 |
| Cow position: | chr23:14778512-14778161 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 54 |
| Conread position: | 1059-1370 |
| Cow position: | chr23:22943688-22943379 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 141 |
| Conread position: | 1059-1403 |
| Cow position: | chr23:1013137-1012786 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 1070-1403 |
| Cow position: | chr23:16498566-16498231 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 1077-1403 |
| Cow position: | chr23:15876903-15876560 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 278 |
| Conread position: | 1079-1403 |
| Cow position: | chr23:19450784-19451117 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 69, 190 |
| Conread position: | 1093-1404 |
| Cow position: | chr23:25683252-25682933 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 253 |
| Conread position: | 1103-1403 |
| Cow position: | chr23:2758587-2758895 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1104-1400 |
| Cow position: | chr23:23171195-23171504 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 1104-1403 |
| Cow position: | chr23:1023259-1022970 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 1161-1400 |
| Cow position: | chr23:2781208-2780962 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1161-1403 |
| Cow position: | chr23:965736-965488 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1161-1403 |
| Cow position: | chr23:2576186-2576432 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 1161-1403 |
| Cow position: | chr23:6220013-6220253 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 1161-1404 |
| Cow position: | chr23:7369307-7369532 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1174-1393 |
| Cow position: | chr23:38581516-38581725 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 185, 47 |
| Conread position: | 1178-1402 |
| Cow position: | chr23:15041962-15041739 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1183-1404 |
| Cow position: | chr23:5873792-5873571 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 1184-1403 |
| Cow position: | chr23:14964256-14964039 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 1201-1404 |
| Cow position: | chr23:948986-948788 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 35, 77 |
| Conread position: | 1203-1403 |
| Cow position: | chr23:18127472-18127274 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 1208-1403 |
| Cow position: | chr23:8286842-8287035 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 1209-1403 |
| Cow position: | chr23:1956715-1956903 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 1220-1341 |
| Cow position: | chr23:39110660-39110538 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 1231-1403 |
| Cow position: | chr23:4753931-4754107 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 1233-1401 |
| Cow position: | chr23:8299532-8299366 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 1233-1403 |
| Cow position: | chr23:29402883-29402713 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1241-1403 |
| Cow position: | chr23:5739510-5739351 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1243-1400 |
| Cow position: | chr23:25534165-25534322 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1244-1403 |
| Cow position: | chr23:26159878-26159719 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 147, 11 |
| Conread position: | 1252-1403 |
| Cow position: | chr23:7045586-7045436 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1252-1403 |
| Cow position: | chr23:13511966-13512118 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1272-1403 |
| Cow position: | chr23:2440979-2440848 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 60 |
Show alignments to all cow chromosomes.