Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 31-539
Cow position: chr24:16650190-16649696 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 25

Conread position: 33-497
Cow position: chr24:12225376-12224911 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 299
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 106, 45

Conread position: 33-520
Cow position: chr24:6026019-6025529 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 33-520
Cow position: chr24:6083080-6083565 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 316
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 113, 35

Conread position: 37-520
Cow position: chr24:7713209-7712724 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 312
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 106, 31

Conread position: 38-239
Cow position: chr24:17315384-17315181 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 149

Conread position: 58-328
Cow position: chr24:12290221-12289953 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 105, 24

Conread position: 68-480
Cow position: chr24:12114978-12114563 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 278
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 78, 44

Conread position: 74-529
Cow position: chr24:33740225-33739767 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 49

Conread position: 74-540
Cow position: chr24:13186652-13187126 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 302
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 68, 41

Conread position: 86-520
Cow position: chr24:6433364-6433805 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 275
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 60, 29

Conread position: 93-543
Cow position: chr24:16085543-16085084 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 52, 22

Conread position: 98-509
Cow position: chr24:9189588-9189174 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 266
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 18

Conread position: 98-518
Cow position: chr24:13020845-13021269 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 278
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 23

Conread position: 98-520
Cow position: chr24:29306680-29306256 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 18

Conread position: 123-520
Cow position: chr24:6644583-6644985 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 165

Conread position: 145-520
Cow position: chr24:36561012-36560640 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 179

Conread position: 164-423
Cow position: chr24:8029108-8029369 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 72, 107

Conread position: 171-549
Cow position: chr24:12209306-12208943 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 132, 49

Conread position: 179-509
Cow position: chr24:14385359-14385019 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 126

Conread position: 189-520
Cow position: chr24:10657289-10657621 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 88

Conread position: 193-509
Cow position: chr24:6144632-6144949 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 98

Conread position: 204-548
Cow position: chr24:12798484-12798130 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 95

Conread position: 215-497
Cow position: chr24:19832682-19832962 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 13

Conread position: 215-509
Cow position: chr24:9544123-9544420 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 65

Conread position: 215-509
Cow position: chr24:29186101-29186394 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 13

Conread position: 228-509
Cow position: chr24:37301738-37301459 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 41

Conread position: 230-548
Cow position: chr24:12236361-12236680 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 61

Conread position: 230-548
Cow position: chr24:13532197-13531891 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 230-548
Cow position: chr24:17186888-17187183 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 37

Conread position: 237-548
Cow position: chr24:14583435-14583740 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 30

Conread position: 253-548
Cow position: chr24:14391388-14391101 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 37

Conread position: 273-546
Cow position: chr24:37216071-37216345 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 139

Conread position: 284-509
Cow position: chr24:4416169-4415936 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 6

Conread position: 290-625
Cow position: chr24:17314939-17314620 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 299-509
Cow position: chr24:11157242-11157032 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 63, 55

Conread position: 312-509
Cow position: chr24:35839204-35839004 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 14

Conread position: 324-509
Cow position: chr24:6357419-6357607 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 343-509
Cow position: chr24:149168-149002 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 343-536
Cow position: chr24:39677861-39678056 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 164

Conread position: 344-535
Cow position: chr24:36707053-36707242 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 349-624
Cow position: chr24:12289293-12289025 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 75

Conread position: 351-631
Cow position: chr24:15392879-15392602 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 202

Conread position: 375-562
Cow position: chr24:6335142-6335328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 549-972
Cow position: chr24:6336067-6336487 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 59

Conread position: 549-1137
Cow position: chr24:12237437-12238057 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 108

Conread position: 549-1403
Cow position: chr24:36559545-36558679 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 54

Conread position: 567-1246
Cow position: chr24:6669912-6669212 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 49

Conread position: 571-1403
Cow position: chr24:6048834-6049638 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 93

Conread position: 585-1069
Cow position: chr24:14872701-14872211 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 319
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 43

Conread position: 607-1045
Cow position: chr24:16472163-16472621 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 203

Conread position: 608-1078
Cow position: chr24:16648722-16648224 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 180

Conread position: 617-1403
Cow position: chr24:38637821-38638632 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 104

Conread position: 618-1404
Cow position: chr24:12206029-12205214 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 177

Conread position: 628-1385
Cow position: chr24:805834-805083 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 28

Conread position: 640-970
Cow position: chr24:14333776-14334110 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 156

Conread position: 640-1403
Cow position: chr24:19833701-19834488 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 650-1403
Cow position: chr24:12086532-12087297 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 14

Conread position: 664-935
Cow position: chr24:7090826-7090556 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 151, 28

Conread position: 664-1057
Cow position: chr24:33739002-33738604 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 664-1253
Cow position: chr24:6646038-6646646 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 664-1372
Cow position: chr24:13188511-13189234 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 664-1400
Cow position: chr24:43814102-43814854 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 31

Conread position: 666-879
Cow position: chr24:37217352-37217564 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 6

Conread position: 666-1230
Cow position: chr24:6538303-6538874 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 26

Conread position: 670-1403
Cow position: chr24:12335428-12334665 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 8

Conread position: 670-1403
Cow position: chr24:29187630-29188384 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1403
Cow position: chr24:33933713-33934466 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 672-1403
Cow position: chr24:32846063-32846795 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 137

Conread position: 675-1400
Cow position: chr24:6024758-6024017 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 679-1403
Cow position: chr24:148265-147518 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 574

Conread position: 682-1029
Cow position: chr24:9091932-9091574 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 33, 19

Conread position: 682-1070
Cow position: chr24:12130621-12130226 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 76

Conread position: 683-1354
Cow position: chr24:29703884-29704547 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 421
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 58

Conread position: 695-900
Cow position: chr24:30900765-30900560 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 99

Conread position: 701-894
Cow position: chr24:16084282-16084090 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 18

Conread position: 704-899
Cow position: chr24:6434613-6434809 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 100, 0

Conread position: 704-1051
Cow position: chr24:40549248-40549594 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1092
Cow position: chr24:22793547-22793946 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr24:5992854-5992137 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr24:9188357-9187642 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 704-1400
Cow position: chr24:29305948-29305226 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1403
Cow position: chr24:14390178-14389447 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 81

Conread position: 711-1149
Cow position: chr24:1449642-1450070 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 111

Conread position: 711-1403
Cow position: chr24:4415141-4414439 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 170

Conread position: 712-1403
Cow position: chr24:17696588-17695889 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 186

Conread position: 712-1403
Cow position: chr24:22971480-22972184 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 18

Conread position: 716-917
Cow position: chr24:8030538-8030739 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 25

Conread position: 722-1043
Cow position: chr24:12796815-12796505 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 736-1150
Cow position: chr24:14754594-14754171 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 740-1022
Cow position: chr24:7061805-7062091 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 740-1110
Cow position: chr24:23185051-23184689 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 150

Conread position: 740-1385
Cow position: chr24:12484907-12484241 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 344

Conread position: 740-1399
Cow position: chr24:6660084-6659409 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 538

Conread position: 740-1400
Cow position: chr24:6084482-6085151 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 536

Conread position: 740-1400
Cow position: chr24:44017944-44018608 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 314

Conread position: 746-845
Cow position: chr24:6145851-6145950 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 88
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 751-1400
Cow position: chr24:23505440-23504774 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 171

Conread position: 784-1403
Cow position: chr24:12110236-12109612 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 26

Conread position: 810-1112
Cow position: chr24:6328832-6328522 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 184

Conread position: 810-1401
Cow position: chr24:6059380-6059988 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 812-1403
Cow position: chr24:31006914-31006337 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 382
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 147, 132

Conread position: 821-1040
Cow position: chr24:35870189-35869957 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 99

Conread position: 824-1403
Cow position: chr24:9544558-9545155 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 507

Conread position: 826-1403
Cow position: chr24:19702003-19702576 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 50

Conread position: 827-1403
Cow position: chr24:14301994-14302574 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 43

Conread position: 828-1144
Cow position: chr24:25926311-25925990 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 207
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 80, 74

Conread position: 836-1400
Cow position: chr24:12700312-12699717 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 446

Conread position: 839-1403
Cow position: chr24:12143825-12143246 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 30

Conread position: 851-1054
Cow position: chr24:1437181-1436978 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 18

Conread position: 861-1326
Cow position: chr24:6065182-6064708 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 22

Conread position: 873-1398
Cow position: chr24:31114225-31114737 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 24

Conread position: 877-1150
Cow position: chr24:6145957-6146225 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 21

Conread position: 879-1403
Cow position: chr24:13321729-13322251 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 352
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 27, 137

Conread position: 902-1340
Cow position: chr24:8030862-8031321 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 905-1146
Cow position: chr24:11866898-11866651 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 220

Conread position: 905-1344
Cow position: chr24:43807393-43807828 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 286
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 33

Conread position: 905-1400
Cow position: chr24:6435052-6435571 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 376

Conread position: 910-1403
Cow position: chr24:16535662-16535173 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 303
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 40

Conread position: 946-1206
Cow position: chr24:37064374-37064105 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 83

Conread position: 946-1385
Cow position: chr24:36708977-36709440 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 948-1287
Cow position: chr24:17302833-17302493 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 31

Conread position: 951-1402
Cow position: chr24:12162544-12163003 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 124

Conread position: 955-1150
Cow position: chr24:44325981-44326183 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 956-1400
Cow position: chr24:12150665-12150222 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 311
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 38, 8

Conread position: 971-1220
Cow position: chr24:21960306-21960041 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 983-1403
Cow position: chr24:13232909-13233345 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 984-1382
Cow position: chr24:7090309-7089897 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 81

Conread position: 1003-1363
Cow position: chr24:14383911-14383541 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 99

Conread position: 1025-1349
Cow position: chr24:34754769-34755094 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 204

Conread position: 1025-1357
Cow position: chr24:28210381-28210033 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 127, 345

Conread position: 1025-1402
Cow position: chr24:40655753-40656147 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1025-1403
Cow position: chr24:6475642-6476029 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 116

Conread position: 1026-1403
Cow position: chr24:19324739-19324361 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 47

Conread position: 1034-1403
Cow position: chr24:12129354-12128975 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 20

Conread position: 1042-1403
Cow position: chr24:5942460-5942820 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 57, 22

Conread position: 1048-1403
Cow position: chr24:37200282-37199920 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 167

Conread position: 1050-1401
Cow position: chr24:9091317-9090973 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 51

Conread position: 1050-1403
Cow position: chr24:6406756-6407123 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1054-1401
Cow position: chr24:14871580-14871224 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1058-1367
Cow position: chr24:6337119-6337456 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1066-1404
Cow position: chr24:6332954-6332600 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1090-1379
Cow position: chr24:40193282-40193582 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 1104-1400
Cow position: chr24:6328251-6327941 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 1122-1404
Cow position: chr24:29182949-29183245 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 1124-1403
Cow position: chr24:40975894-40975610 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 192

Conread position: 1161-1401
Cow position: chr24:16876347-16876105 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 1161-1403
Cow position: chr24:15248515-15248271 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 1163-1401
Cow position: chr24:34494308-34494066 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1166-1401
Cow position: chr24:25467765-25467534 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 16, 96

Conread position: 1172-1404
Cow position: chr24:11866389-11866154 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 1184-1403
Cow position: chr24:6141954-6142180 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 43, 91

Conread position: 1196-1404
Cow position: chr24:12238181-12238386 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 5, 162

Conread position: 1205-1358
Cow position: chr24:6545257-6545103 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 1209-1403
Cow position: chr24:6675507-6675712 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 1211-1361
Cow position: chr24:16083939-16084090 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 24, 50

Conread position: 1221-1403
Cow position: chr24:27147621-27147803 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 15, 81

Conread position: 1234-1403
Cow position: chr24:6129759-6129917 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 1237-1403
Cow position: chr24:14754599-14754765 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 141
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1237-1404
Cow position: chr24:14278577-14278414 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 129, 38

Conread position: 1237-1404
Cow position: chr24:16097481-16097645 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 1249-1400
Cow position: chr24:13044691-13044541 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 7

Conread position: 1260-1400
Cow position: chr24:17321653-17321794 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.