Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 30-227
Cow position: chr26:21350069-21350266 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 111, 13

Conread position: 33-520
Cow position: chr26:12589503-12589015 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 38-347
Cow position: chr26:20300166-20299855 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 143, 42

Conread position: 38-546
Cow position: chr26:9847053-9846536 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 73

Conread position: 52-548
Cow position: chr26:34012123-34012618 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 55-315
Cow position: chr26:9859844-9859592 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 183, 56

Conread position: 73-519
Cow position: chr26:2353251-2352803 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 74-423
Cow position: chr26:8860487-8860133 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 47

Conread position: 77-520
Cow position: chr26:30781867-30782314 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 38

Conread position: 86-520
Cow position: chr26:9111572-9112011 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 278
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 66, 30

Conread position: 95-505
Cow position: chr26:8918106-8918516 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 263
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 58, 26

Conread position: 98-520
Cow position: chr26:11254942-11254516 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 18

Conread position: 98-520
Cow position: chr26:24200753-24201167 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 273
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 18

Conread position: 125-392
Cow position: chr26:9089928-9090200 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 138

Conread position: 165-509
Cow position: chr26:17397713-17397369 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 31

Conread position: 178-509
Cow position: chr26:6851044-6850708 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 229
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 108

Conread position: 178-513
Cow position: chr26:9564128-9563787 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 64

Conread position: 190-520
Cow position: chr26:19997702-19998032 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 87

Conread position: 215-509
Cow position: chr26:19352239-19351946 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 13

Conread position: 233-508
Cow position: chr26:23605587-23605319 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 34

Conread position: 290-509
Cow position: chr26:35150506-35150284 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 57

Conread position: 296-547
Cow position: chr26:19142105-19142343 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 51

Conread position: 338-548
Cow position: chr26:28424544-28424336 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 163

Conread position: 342-560
Cow position: chr26:9851245-9851031 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 0

Conread position: 343-561
Cow position: chr26:6601381-6601592 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 23

Conread position: 349-560
Cow position: chr26:9854702-9854495 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 162, 0

Conread position: 381-509
Cow position: chr26:3691263-3691391 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 505-1071
Cow position: chr26:20036257-20036832 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 359
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 185, 44

Conread position: 553-1362
Cow position: chr26:4334102-4333270 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 599-1327
Cow position: chr26:2617559-2616820 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 463
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 138

Conread position: 640-965
Cow position: chr26:28083965-28084296 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 96, 215

Conread position: 664-1400
Cow position: chr26:2198941-2199695 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 668-1404
Cow position: chr26:30589056-30588298 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 628

Conread position: 670-1403
Cow position: chr26:6849113-6848371 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 60

Conread position: 670-1403
Cow position: chr26:19351190-19350448 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 675-1400
Cow position: chr26:30783069-30783824 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 679-1403
Cow position: chr26:17396600-17395840 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 682-1401
Cow position: chr26:4604858-4604112 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 37

Conread position: 703-1150
Cow position: chr26:9563000-9562547 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 704-923
Cow position: chr26:9113090-9113310 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 21

Conread position: 704-959
Cow position: chr26:11253704-11253450 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1083
Cow position: chr26:4806209-4805825 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1318
Cow position: chr26:3030476-3029841 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr26:2352008-2351292 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr26:8870234-8870943 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 99

Conread position: 704-1400
Cow position: chr26:8919202-8919900 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr26:12588213-12587497 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr26:15144408-15143692 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 415

Conread position: 740-915
Cow position: chr26:18855476-18855652 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 740-1400
Cow position: chr26:18852607-18853289 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 541

Conread position: 742-1403
Cow position: chr26:9844499-9843835 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 81

Conread position: 743-1403
Cow position: chr26:21826288-21825619 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 142

Conread position: 754-1351
Cow position: chr26:17996200-17995586 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 301

Conread position: 825-1384
Cow position: chr26:34489917-34490473 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 338
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 46

Conread position: 863-1402
Cow position: chr26:26270268-26270829 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 363
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 11

Conread position: 951-1251
Cow position: chr26:8083428-8083754 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 134

Conread position: 977-1326
Cow position: chr26:5675761-5676124 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 130

Conread position: 978-1403
Cow position: chr26:14894574-14895012 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 289

Conread position: 1035-1401
Cow position: chr26:2274823-2274451 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 32

Conread position: 1042-1403
Cow position: chr26:8614516-8614152 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 61

Conread position: 1060-1403
Cow position: chr26:1626714-1627053 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 181, 67

Conread position: 1061-1400
Cow position: chr26:1087735-1087375 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 212

Conread position: 1102-1281
Cow position: chr26:33524002-33524192 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1161-1398
Cow position: chr26:11030997-11031229 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 74, 15

Conread position: 1181-1403
Cow position: chr26:9561931-9561708 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1205-1365
Cow position: chr26:14507687-14507526 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1221-1370
Cow position: chr26:8085609-8085756 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1224-1400
Cow position: chr26:3864667-3864489 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 37

Conread position: 1237-1402
Cow position: chr26:20264599-20264761 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 1237-1403
Cow position: chr26:32051836-32052001 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 62

Conread position: 1238-1403
Cow position: chr26:8863364-8863203 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.