Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055M19.3
        

               Conread position:
               30-227
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               33-520
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               38-347
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               143, 42
               

               Conread position:
               38-546
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 73
               

               Conread position:
               52-548
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               55-315
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               183, 56
               

               Conread position:
               73-519
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 42
               

               Conread position:
               74-423
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               77-520
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               86-520
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               278
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               95-505
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               98-520
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               98-520
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               125-392
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 138
               

               Conread position:
               165-509
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               178-509
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 108
               

               Conread position:
               178-513
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               190-520
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               215-509
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               233-508
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               290-509
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               296-547
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               338-548
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               26, 163
               

               Conread position:
               342-560
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               343-561
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 23
               

               Conread position:
               349-560
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               381-509
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               505-1071
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               359
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               185, 44
               

               Conread position:
               553-1362
               

               Cow position:
               
               

               Alignm length:
               843
               

               Alignm identity:
               604
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               599-1327
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               463
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               640-965
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 215
               

               Conread position:
               664-1400
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               668-1404
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 628
               

               Conread position:
               670-1403
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 60
               

               Conread position:
               670-1403
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               675-1400
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               679-1403
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               682-1401
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               703-1150
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               704-923
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               704-959
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1083
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1318
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1400
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1400
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 99
               

               Conread position:
               704-1400
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1400
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               544
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               704-1400
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 415
               

               Conread position:
               740-915
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               740-1400
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 541
               

               Conread position:
               742-1403
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 81
               

               Conread position:
               743-1403
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 142
               

               Conread position:
               754-1351
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 301
               

               Conread position:
               825-1384
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               863-1402
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               363
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               951-1251
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               977-1326
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 130
               

               Conread position:
               978-1403
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 289
               

               Conread position:
               1035-1401
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               1042-1403
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               1060-1403
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               181, 67
               

               Conread position:
               1061-1400
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 212
               

               Conread position:
               1102-1281
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1161-1398
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               1181-1403
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1205-1365
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               1221-1370
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1224-1400
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               1237-1402
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1237-1403
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               1238-1403
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.