Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8055M19.3
        

               Conread position:
               31-363
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               203, 37
               

               Conread position:
               37-270
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               74-548
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 41
               

               Conread position:
               107-550
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               163-512
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 129
               

               Conread position:
               164-497
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 32
               

               Conread position:
               169-509
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               134, 27
               

               Conread position:
               178-488
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               178-509
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               178-509
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               190-465
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               230-509
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               230-548
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               230-562
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               233-488
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               233-509
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               236-509
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               236-548
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               238-562
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               65, 29
               

               Conread position:
               247-509
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               105, 13
               

               Conread position:
               260-546
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 48
               

               Conread position:
               271-509
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 228
               

               Conread position:
               321-520
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               409-548
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               526-972
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               547-1404
               

               Cow position:
               
               

               Alignm length:
               888
               

               Alignm identity:
               653
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 41
               

               Conread position:
               601-1084
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               617-832
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               628-1222
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               408
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               16, 146
               

               Conread position:
               636-929
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               661-1403
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               495
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               44, 131
               

               Conread position:
               665-1403
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 619
               

               Conread position:
               666-1404
               

               Cow position:
               
               

               Alignm length:
               768
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               667-1020
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 201
               

               Conread position:
               670-1221
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               670-1403
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               671-1403
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 7
               

               Conread position:
               673-1394
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               675-1400
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               572
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               679-1403
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 426
               

               Conread position:
               680-1403
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 319
               

               Conread position:
               682-1403
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 131
               

               Conread position:
               703-1367
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               712-1403
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 537
               

               Conread position:
               715-1325
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               406
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 213
               

               Conread position:
               725-968
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               731-1147
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               735-1150
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 49
               

               Conread position:
               735-1403
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 283
               

               Conread position:
               740-928
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               740-1231
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 137
               

               Conread position:
               743-968
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               744-1403
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 0
               

               Conread position:
               746-938
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               810-1377
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               367
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               167, 137
               

               Conread position:
               810-1403
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 115
               

               Conread position:
               824-1403
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 43
               

               Conread position:
               910-1403
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 300
               

               Conread position:
               915-1376
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               55, 18
               

               Conread position:
               920-1389
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               938-1400
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 340
               

               Conread position:
               939-1316
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               977-1303
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 297
               

               Conread position:
               984-1403
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               1000-1400
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 277
               

               Conread position:
               1102-1403
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1145-1403
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1152-1403
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               1152-1403
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               1178-1403
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               60, 88
               

               Conread position:
               1241-1403
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1266-1403
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1308-1403
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.