Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055M19.3 |
| Conread position: | 6-548 |
| Cow position: | chr28:2990916-2990379 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 34 |
| Conread position: | 20-562 |
| Cow position: | chr28:7816294-7816843 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 92 |
| Conread position: | 30-561 |
| Cow position: | chr28:1388294-1387798 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 38 |
| Conread position: | 33-529 |
| Cow position: | chr28:15921414-15920934 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 109, 41 |
| Conread position: | 38-545 |
| Cow position: | chr28:5811778-5812291 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 39-314 |
| Cow position: | chr28:25995013-25995274 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 40-548 |
| Cow position: | chr28:8722368-8721866 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 71 |
| Conread position: | 43-313 |
| Cow position: | chr28:26006541-26006815 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 43-548 |
| Cow position: | chr28:21358093-21358604 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 43-548 |
| Cow position: | chr28:24666702-24667195 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 68 |
| Conread position: | 44-283 |
| Cow position: | chr28:25784599-25784838 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 137, 67 |
| Conread position: | 47-545 |
| Cow position: | chr28:10620022-10619524 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 84-548 |
| Cow position: | chr28:7791117-7790650 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 86-520 |
| Cow position: | chr28:7820578-7821014 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 98-520 |
| Cow position: | chr28:6663390-6663817 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 98-520 |
| Cow position: | chr28:13441778-13441351 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 98-520 |
| Cow position: | chr28:15950080-15950507 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 107-406 |
| Cow position: | chr28:17314096-17314424 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 123-518 |
| Cow position: | chr28:488613-489014 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 146-548 |
| Cow position: | chr28:21324971-21325371 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 172-508 |
| Cow position: | chr28:6781145-6780815 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 178-509 |
| Cow position: | chr28:8377785-8378114 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 178-509 |
| Cow position: | chr28:13521954-13522281 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 48 |
| Conread position: | 178-509 |
| Cow position: | chr28:15378800-15378466 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 178-509 |
| Cow position: | chr28:22261917-22261603 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 124, 18 |
| Conread position: | 181-520 |
| Cow position: | chr28:1952326-1952669 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 62, 103 |
| Conread position: | 215-507 |
| Cow position: | chr28:12149582-12149875 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 215-509 |
| Cow position: | chr28:1503892-1504189 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-509 |
| Cow position: | chr28:5244808-5245104 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 13 |
| Conread position: | 215-509 |
| Cow position: | chr28:32793116-32792831 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 224-509 |
| Cow position: | chr28:26426992-26426713 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 79, 56 |
| Conread position: | 227-534 |
| Cow position: | chr28:5115807-5115502 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 54 |
| Conread position: | 228-509 |
| Cow position: | chr28:17331378-17331107 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 230-509 |
| Cow position: | chr28:15681190-15681462 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-513 |
| Cow position: | chr28:9137728-9137444 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 236-562 |
| Cow position: | chr28:4382108-4381784 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 246-488 |
| Cow position: | chr28:17668226-17667985 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 247-497 |
| Cow position: | chr28:5565149-5565397 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 122, 33 |
| Conread position: | 269-488 |
| Cow position: | chr28:9157106-9156886 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 285-548 |
| Cow position: | chr28:5796142-5796405 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 5 |
| Conread position: | 322-509 |
| Cow position: | chr28:1168806-1168616 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 322-509 |
| Cow position: | chr28:3193413-3193227 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 322-509 |
| Cow position: | chr28:33251677-33251867 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 334-509 |
| Cow position: | chr28:5752790-5752612 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 338-508 |
| Cow position: | chr28:2591321-2591491 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 343-527 |
| Cow position: | chr28:13721343-13721527 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 343-531 |
| Cow position: | chr28:22827440-22827625 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 343-690 |
| Cow position: | chr28:34648332-34648679 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 208, 110 |
| Conread position: | 347-509 |
| Cow position: | chr28:9953550-9953712 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-531 |
| Cow position: | chr28:26007447-26007605 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 388-535 |
| Cow position: | chr28:25785330-25785471 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 474-948 |
| Cow position: | chr28:14913614-14914100 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 538-1132 |
| Cow position: | chr28:5797931-5798517 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 9 |
| Conread position: | 546-880 |
| Cow position: | chr28:10617643-10617313 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 125, 37 |
| Conread position: | 549-836 |
| Cow position: | chr28:21359515-21359810 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 122, 54 |
| Conread position: | 552-1401 |
| Cow position: | chr28:10647197-10646363 (view UCSC Genome Browser custom track) |
| Alignm length: | 879 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 30 |
| Conread position: | 563-1302 |
| Cow position: | chr28:6656328-6655585 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 567-1403 |
| Cow position: | chr28:22065151-22064341 (view UCSC Genome Browser custom track) |
| Alignm length: | 851 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 49 |
| Conread position: | 568-1063 |
| Cow position: | chr28:10230018-10229524 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 39 |
| Conread position: | 595-1403 |
| Cow position: | chr28:10071506-10072329 (view UCSC Genome Browser custom track) |
| Alignm length: | 835 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 597-1062 |
| Cow position: | chr28:29446888-29446412 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 55, 31 |
| Conread position: | 599-970 |
| Cow position: | chr28:5801213-5801599 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 275 |
| Conread position: | 600-1247 |
| Cow position: | chr28:10872433-10873077 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 613-1050 |
| Cow position: | chr28:5813247-5813702 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 614-970 |
| Cow position: | chr28:3020503-3020148 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 64 |
| Conread position: | 617-1150 |
| Cow position: | chr28:10497779-10497248 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 223 |
| Conread position: | 617-1211 |
| Cow position: | chr28:2989000-2988375 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 617-1328 |
| Cow position: | chr28:7789709-7788971 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 558 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 184 |
| Conread position: | 622-895 |
| Cow position: | chr28:12229937-12229669 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 650-1400 |
| Cow position: | chr28:26425959-26425204 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 14 |
| Conread position: | 650-1403 |
| Cow position: | chr28:5937768-5938539 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 592 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 14 |
| Conread position: | 650-1403 |
| Cow position: | chr28:13460262-13461028 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 14 |
| Conread position: | 659-1074 |
| Cow position: | chr28:782687-783108 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 212 |
| Conread position: | 662-1399 |
| Cow position: | chr28:22260854-22260101 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 664-1150 |
| Cow position: | chr28:1953426-1953918 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 45 |
| Conread position: | 664-1403 |
| Cow position: | chr28:22233103-22232366 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 665-1397 |
| Cow position: | chr28:12150601-12151353 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 671 |
| Conread position: | 670-859 |
| Cow position: | chr28:14705366-14705176 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-953 |
| Cow position: | chr28:29820039-29820322 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-972 |
| Cow position: | chr28:10581679-10581376 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1030 |
| Cow position: | chr28:34594284-34594648 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 670-1330 |
| Cow position: | chr28:17388787-17389463 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 670-1399 |
| Cow position: | chr28:1167576-1166828 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1399 |
| Cow position: | chr28:17666992-17666256 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 670-1400 |
| Cow position: | chr28:32792075-32791326 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1400 |
| Cow position: | chr28:33252617-33253363 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr28:5113993-5113242 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr28:5566450-5567209 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 670-1403 |
| Cow position: | chr28:5751400-5750653 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 572 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 670-1403 |
| Cow position: | chr28:7002295-7003050 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 571 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 8 |
| Conread position: | 675-1400 |
| Cow position: | chr28:6780035-6779287 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 28 |
| Conread position: | 678-1400 |
| Cow position: | chr28:12409917-12409183 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 602 |
| Conread position: | 679-1403 |
| Cow position: | chr28:1814555-1813809 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 574 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 134 |
| Conread position: | 680-1403 |
| Cow position: | chr28:7740791-7741502 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 271 |
| Conread position: | 703-1403 |
| Cow position: | chr28:1505204-1505921 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 382 |
| Conread position: | 704-1093 |
| Cow position: | chr28:7822591-7822987 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 704-1400 |
| Cow position: | chr28:2724591-2723873 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 704-1400 |
| Cow position: | chr28:6538928-6538213 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 704-1400 |
| Cow position: | chr28:14750880-14751595 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 712-972 |
| Cow position: | chr28:24667958-24668207 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 712-1000 |
| Cow position: | chr28:2083942-2084229 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 78 |
| Conread position: | 715-1403 |
| Cow position: | chr28:1387053-1386344 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 95 |
| Conread position: | 715-1403 |
| Cow position: | chr28:3191895-3191201 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 75 |
| Conread position: | 725-1399 |
| Cow position: | chr28:18520085-18519399 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 119 |
| Conread position: | 737-1404 |
| Cow position: | chr28:5765134-5765807 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 48 |
| Conread position: | 740-929 |
| Cow position: | chr28:24704875-24705057 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 740-968 |
| Cow position: | chr28:8720922-8720694 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 740-974 |
| Cow position: | chr28:24588459-24588695 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 740-1150 |
| Cow position: | chr28:28473023-28473436 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 218, 52 |
| Conread position: | 740-1215 |
| Cow position: | chr28:14195317-14194825 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 167 |
| Conread position: | 740-1370 |
| Cow position: | chr28:21944656-21944026 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 385 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 219, 64 |
| Conread position: | 740-1400 |
| Cow position: | chr28:485193-484545 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 495, 221 |
| Conread position: | 740-1400 |
| Cow position: | chr28:24589221-24589905 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 406 |
| Conread position: | 741-1310 |
| Cow position: | chr28:18100846-18100245 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 85 |
| Conread position: | 743-926 |
| Cow position: | chr28:7882019-7881837 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 744-1104 |
| Cow position: | chr28:7708490-7708130 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 744-1219 |
| Cow position: | chr28:33259021-33259508 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 751-1150 |
| Cow position: | chr28:26489688-26490089 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 163, 369 |
| Conread position: | 770-927 |
| Cow position: | chr28:7880928-7881085 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 799-1097 |
| Cow position: | chr28:8379268-8379572 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 130 |
| Conread position: | 811-1040 |
| Cow position: | chr28:7810945-7811165 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 6, 71 |
| Conread position: | 821-1403 |
| Cow position: | chr28:21359932-21360539 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 454 |
| Conread position: | 834-1350 |
| Cow position: | chr28:29455015-29454506 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 5 |
| Conread position: | 849-1178 |
| Cow position: | chr28:32627243-32626926 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 175, 25 |
| Conread position: | 851-1403 |
| Cow position: | chr28:14704903-14704333 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 867-1081 |
| Cow position: | chr28:10617289-10617074 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 153, 122 |
| Conread position: | 874-1368 |
| Cow position: | chr28:25169566-25169063 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 108 |
| Conread position: | 876-1272 |
| Cow position: | chr28:18147240-18146833 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 876-1327 |
| Cow position: | chr28:24245289-24245762 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 93, 49 |
| Conread position: | 930-1403 |
| Cow position: | chr28:29820567-29821050 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 966-1404 |
| Cow position: | chr28:8720345-8719891 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 61 |
| Conread position: | 968-1384 |
| Cow position: | chr28:3020110-3019682 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 58 |
| Conread position: | 977-1129 |
| Cow position: | chr28:7881830-7881679 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 984-1114 |
| Cow position: | chr28:17732438-17732305 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 984-1403 |
| Cow position: | chr28:24668242-24668666 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 93 |
| Conread position: | 990-1403 |
| Cow position: | chr28:15035469-15035062 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 170 |
| Conread position: | 993-1403 |
| Cow position: | chr28:24540726-24541148 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 1035-1237 |
| Cow position: | chr28:11490830-11490618 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 1039-1403 |
| Cow position: | chr28:5802710-5803093 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 1042-1403 |
| Cow position: | chr28:9268552-9268909 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 1047-1402 |
| Cow position: | chr28:5814074-5814427 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 41 |
| Conread position: | 1051-1403 |
| Cow position: | chr28:783365-783724 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 342 |
| Conread position: | 1063-1403 |
| Cow position: | chr28:7811165-7811504 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 69 |
| Conread position: | 1074-1374 |
| Cow position: | chr28:7823253-7823566 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 137 |
| Conread position: | 1092-1403 |
| Cow position: | chr28:8379786-8380116 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1118-1385 |
| Cow position: | chr28:24884222-24883939 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 1130-1369 |
| Cow position: | chr28:2085283-2085520 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 1144-1403 |
| Cow position: | chr28:6231979-6231720 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 1153-1384 |
| Cow position: | chr28:27958876-27958653 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 1154-1398 |
| Cow position: | chr28:9179427-9179675 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 111 |
| Conread position: | 1161-1375 |
| Cow position: | chr28:32329717-32329495 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 1161-1403 |
| Cow position: | chr28:10581280-10581036 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 1161-1403 |
| Cow position: | chr28:29761121-29760875 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 1162-1403 |
| Cow position: | chr28:1217343-1217102 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 1162-1403 |
| Cow position: | chr28:15586896-15587146 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 1169-1404 |
| Cow position: | chr28:15684056-15684294 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1170-1403 |
| Cow position: | chr28:10460783-10460551 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 1195-1403 |
| Cow position: | chr28:2429127-2429333 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 1214-1404 |
| Cow position: | chr28:13603967-13603775 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1222-1403 |
| Cow position: | chr28:5799169-5799352 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1234-1387 |
| Cow position: | chr28:14233053-14232899 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 41 |
| Conread position: | 1234-1397 |
| Cow position: | chr28:17382245-17382084 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 1235-1403 |
| Cow position: | chr28:2988197-2988029 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 141 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1237-1403 |
| Cow position: | chr28:11490574-11490411 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 1240-1402 |
| Cow position: | chr28:18146838-18146677 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1291-1400 |
| Cow position: | chr28:1954296-1954405 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.