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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055M19.3
        

               
Conread position:
               
31-319
               

               
Cow position:
               
chr29:103065-103354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 80
               

               
Conread position:
               
33-520
               

               
Cow position:
               
chr29:35295903-35296390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
38-319
               

               
Cow position:
               
chr29:34753213-34752931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
44-548
               

               
Cow position:
               
chr29:2751335-2750830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
73-520
               

               
Cow position:
               
chr29:32315085-32315534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
74-548
               

               
Cow position:
               
chr29:611561-611093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
86-520
               

               
Cow position:
               
chr29:18857733-18857294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
87-497
               

               
Cow position:
               
chr29:32560997-32560585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
93-520
               

               
Cow position:
               
chr29:13577490-13577919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr29:29234422-29234094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
98-504
               

               
Cow position:
               
chr29:670652-670243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
98-508
               

               
Cow position:
               
chr29:40467854-40468265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
98-520
               

               
Cow position:
               
chr29:15895778-15895354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
114-497
               

               
Cow position:
               
chr29:19884333-19884721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
120-301
               

               
Cow position:
               
chr29:45465239-45465056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
164-439
               

               
Cow position:
               
chr29:34924994-34925269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
164-482
               

               
Cow position:
               
chr29:27981387-27981068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr29:27251198-27250840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr29:31120929-31121286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
165-509
               

               
Cow position:
               
chr29:45458902-45459238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
169-509
               

               
Cow position:
               
chr29:40503799-40503465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
169-520
               

               
Cow position:
               
chr29:15970000-15969648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr29:42649537-42649871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr29:42801397-42801731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
32, 119
               

               
Conread position:
               
177-509
               

               
Cow position:
               
chr29:2689118-2689435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
178-497
               

               
Cow position:
               
chr29:16021716-16022035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr29:7432031-7431702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr29:45588116-45587784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
178-513
               

               
Cow position:
               
chr29:32539004-32539329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
190-548
               

               
Cow position:
               
chr29:8663479-8663826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 202
               

               
Conread position:
               
196-509
               

               
Cow position:
               
chr29:10649047-10648731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 85
               

               
Conread position:
               
196-509
               

               
Cow position:
               
chr29:35195914-35196222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
215-497
               

               
Cow position:
               
chr29:15984427-15984708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
215-509
               

               
Cow position:
               
chr29:19652328-19652622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
215-509
               

               
Cow position:
               
chr29:25933308-25933030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
215-509
               

               
Cow position:
               
chr29:26165596-26165304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
227-487
               

               
Cow position:
               
chr29:43366948-43366696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr29:34622807-34622543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-546
               

               
Cow position:
               
chr29:22318712-22318396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr29:27041498-27041194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-562
               

               
Cow position:
               
chr29:16769404-16769716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr29:10824717-10824442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
233-548
               

               
Cow position:
               
chr29:11048530-11048844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
236-548
               

               
Cow position:
               
chr29:10848851-10848542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
247-555
               

               
Cow position:
               
chr29:43321805-43322107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
272-583
               

               
Cow position:
               
chr29:21432074-21431767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
284-509
               

               
Cow position:
               
chr29:34800502-34800275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
321-548
               

               
Cow position:
               
chr29:9644825-9644609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
322-509
               

               
Cow position:
               
chr29:2099169-2099360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
343-512
               

               
Cow position:
               
chr29:30810909-30811075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
349-492
               

               
Cow position:
               
chr29:6874506-6874361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr29:103937-104122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
349-534
               

               
Cow position:
               
chr29:45464422-45464238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
349-535
               

               
Cow position:
               
chr29:34752318-34752138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
371-562
               

               
Cow position:
               
chr29:21543980-21543792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
543-1063
               

               
Cow position:
               
chr29:802795-802265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
549-1129
               

               
Cow position:
               
chr29:105174-105767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
549-1403
               

               
Cow position:
               
chr29:14085981-14085109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 57
               

               
Conread position:
               
550-1082
               

               
Cow position:
               
chr29:15949404-15948872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
589-917
               

               
Cow position:
               
chr29:42650452-42650785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
589-1030
               

               
Cow position:
               
chr29:42802312-42802761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
595-1403
               

               
Cow position:
               
chr29:30260337-30259567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
605-1149
               

               
Cow position:
               
chr29:16016561-16016025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 26
               

               
Conread position:
               
608-1403
               

               
Cow position:
               
chr29:5982506-5981695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
617
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
610-1355
               

               
Cow position:
               
chr29:3698213-3698962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
611-1385
               

               
Cow position:
               
chr29:6212746-6213526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
643-1403
               

               
Cow position:
               
chr29:7430967-7430199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
777
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
382, 5
               

               
Conread position:
               
645-937
               

               
Cow position:
               
chr29:410280-409988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
650-1084
               

               
Cow position:
               
chr29:32540068-32540496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 14
               

               
Conread position:
               
650-1146
               

               
Cow position:
               
chr29:48222-47719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
659-1231
               

               
Cow position:
               
chr29:3177328-3176753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
659-1403
               

               
Cow position:
               
chr29:4634139-4633383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 146
               

               
Conread position:
               
661-1403
               

               
Cow position:
               
chr29:31024508-31023774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
662-1400
               

               
Cow position:
               
chr29:43322817-43323574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
664-1254
               

               
Cow position:
               
chr29:8062232-8061629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 68
               

               
Conread position:
               
664-1385
               

               
Cow position:
               
chr29:610350-609624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 45
               

               
Conread position:
               
665-1019
               

               
Cow position:
               
chr29:19653371-19653740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
665-1398
               

               
Cow position:
               
chr29:40502719-40501966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
665-1400
               

               
Cow position:
               
chr29:19885333-19886092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
665-1403
               

               
Cow position:
               
chr29:10823706-10822964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 211
               

               
Conread position:
               
665-1403
               

               
Cow position:
               
chr29:45459979-45460742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
666-1403
               

               
Cow position:
               
chr29:9643488-9642741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
483, 32
               

               
Conread position:
               
670-963
               

               
Cow position:
               
chr29:6266230-6265935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1061
               

               
Cow position:
               
chr29:23976111-23976504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1360
               

               
Cow position:
               
chr29:16022801-16023508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1400
               

               
Cow position:
               
chr29:10647980-10647233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1400
               

               
Cow position:
               
chr29:26164551-26163816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr29:2100116-2100868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr29:5957875-5958619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 64
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr29:25932273-25931521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr29:38227251-38227997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
675-1400
               

               
Cow position:
               
chr29:13582332-13583096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
675-1403
               

               
Cow position:
               
chr29:16174607-16173867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
675-1403
               

               
Cow position:
               
chr29:45587095-45586356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
544
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
677-1400
               

               
Cow position:
               
chr29:669783-669042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
677-1400
               

               
Cow position:
               
chr29:31181689-31182420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
679-1400
               

               
Cow position:
               
chr29:20251437-20252181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 316
               

               
Conread position:
               
682-1084
               

               
Cow position:
               
chr29:19622970-19622556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
682-1403
               

               
Cow position:
               
chr29:14586199-14586940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
682-1404
               

               
Cow position:
               
chr29:21426753-21426008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 427
               

               
Conread position:
               
703-975
               

               
Cow position:
               
chr29:16110714-16110985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
703-1400
               

               
Cow position:
               
chr29:35297165-35297849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
703-1403
               

               
Cow position:
               
chr29:2841068-2840358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 76
               

               
Conread position:
               
703-1403
               

               
Cow position:
               
chr29:34799505-34798790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 253
               

               
Conread position:
               
703-1403
               

               
Cow position:
               
chr29:39079406-39078686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
722
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 135
               

               
Conread position:
               
704-1049
               

               
Cow position:
               
chr29:7844630-7844982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
704-1332
               

               
Cow position:
               
chr29:27250043-27249395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
704-1375
               

               
Cow position:
               
chr29:15894551-15893858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1398
               

               
Cow position:
               
chr29:15968562-15967847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1400
               

               
Cow position:
               
chr29:34925778-34926494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
711-1400
               

               
Cow position:
               
chr29:18856637-18855934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
710
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
712-1150
               

               
Cow position:
               
chr29:9961600-9962038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
712-1359
               

               
Cow position:
               
chr29:2690214-2690887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 0
               

               
Conread position:
               
716-1400
               

               
Cow position:
               
chr29:27980608-27979908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
737-1016
               

               
Cow position:
               
chr29:21459621-21459913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
71, 257
               

               
Conread position:
               
738-1152
               

               
Cow position:
               
chr29:32584046-32583623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
6, 55
               

               
Conread position:
               
740-1221
               

               
Cow position:
               
chr29:19597913-19597430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
743-1331
               

               
Cow position:
               
chr29:36598247-36597657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
743-1403
               

               
Cow position:
               
chr29:34873183-34873834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 32
               

               
Conread position:
               
744-1390
               

               
Cow position:
               
chr29:35263047-35263686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
752-1404
               

               
Cow position:
               
chr29:9619770-9620438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
765-958
               

               
Cow position:
               
chr29:3045993-3046184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
767-968
               

               
Cow position:
               
chr29:2950892-2950703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
776-960
               

               
Cow position:
               
chr29:8775865-8775684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
781-1403
               

               
Cow position:
               
chr29:251150-251765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 119
               

               
Conread position:
               
810-1072
               

               
Cow position:
               
chr29:21264058-21264324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
825-1282
               

               
Cow position:
               
chr29:13574024-13573543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
836-1400
               

               
Cow position:
               
chr29:32559324-32558731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 446
               

               
Conread position:
               
872-1403
               

               
Cow position:
               
chr29:21238900-21238365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
878-1377
               

               
Cow position:
               
chr29:16173854-16173349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 251
               

               
Conread position:
               
892-1403
               

               
Cow position:
               
chr29:32803929-32804457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 169
               

               
Conread position:
               
920-1403
               

               
Cow position:
               
chr29:32891329-32891805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 57
               

               
Conread position:
               
926-1071
               

               
Cow position:
               
chr29:27263177-27263029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
927-1403
               

               
Cow position:
               
chr29:34584911-34585388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
968-1403
               

               
Cow position:
               
chr29:6265707-6265255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
984-1150
               

               
Cow position:
               
chr29:15785377-15785208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
984-1403
               

               
Cow position:
               
chr29:2949753-2949338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 221
               

               
Conread position:
               
984-1403
               

               
Cow position:
               
chr29:8664108-8664531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
989-1225
               

               
Cow position:
               
chr29:38655059-38654807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1003-1400
               

               
Cow position:
               
chr29:16110981-16111397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 272
               

               
Conread position:
               
1025-1400
               

               
Cow position:
               
chr29:35815348-35814959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 249
               

               
Conread position:
               
1026-1366
               

               
Cow position:
               
chr29:14216598-14216948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
1027-1403
               

               
Cow position:
               
chr29:14210938-14210549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
1034-1199
               

               
Cow position:
               
chr29:16344876-16345054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1049-1400
               

               
Cow position:
               
chr29:7845033-7845403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 224
               

               
Conread position:
               
1049-1403
               

               
Cow position:
               
chr29:41367034-41366670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 206
               

               
Conread position:
               
1051-1403
               

               
Cow position:
               
chr29:23976776-23977140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 234
               

               
Conread position:
               
1053-1252
               

               
Cow position:
               
chr29:2748596-2748383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 152
               

               
Conread position:
               
1064-1402
               

               
Cow position:
               
chr29:32286868-32287211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 218
               

               
Conread position:
               
1077-1343
               

               
Cow position:
               
chr29:15948847-15948564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 203
               

               
Conread position:
               
1080-1403
               

               
Cow position:
               
chr29:8774607-8774294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
1081-1403
               

               
Cow position:
               
chr29:32540778-32541113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
1102-1400
               

               
Cow position:
               
chr29:42803122-42803427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
1105-1402
               

               
Cow position:
               
chr29:37164847-37165155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
1107-1400
               

               
Cow position:
               
chr29:31096672-31096366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
1118-1403
               

               
Cow position:
               
chr29:646520-646814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
1130-1403
               

               
Cow position:
               
chr29:39368617-39368888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 62
               

               
Conread position:
               
1155-1382
               

               
Cow position:
               
chr29:15998074-15997844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
1155-1403
               

               
Cow position:
               
chr29:21264711-21264957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
1155-1403
               

               
Cow position:
               
chr29:43408853-43408606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
1161-1400
               

               
Cow position:
               
chr29:47680-47421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
1161-1403
               

               
Cow position:
               
chr29:19622509-19622264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
1170-1400
               

               
Cow position:
               
chr29:38208285-38208054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
1178-1403
               

               
Cow position:
               
chr29:45205296-45205519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
1183-1403
               

               
Cow position:
               
chr29:19654430-19654648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 87
               

               
Conread position:
               
1210-1403
               

               
Cow position:
               
chr29:38237699-38237506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 42
               

               
Conread position:
               
1212-1403
               

               
Cow position:
               
chr29:35190804-35190612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
1215-1400
               

               
Cow position:
               
chr29:43791253-43791439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
1218-1403
               

               
Cow position:
               
chr29:15997832-15997647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
1228-1400
               

               
Cow position:
               
chr29:13920770-13920596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1233-1362
               

               
Cow position:
               
chr29:21519614-21519485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 115
               

               
Conread position:
               
1234-1384
               

               
Cow position:
               
chr29:16731279-16731129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1234-1403
               

               
Cow position:
               
chr29:801542-801367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1242-1385
               

               
Cow position:
               
chr29:2747573-2747430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1242-1385
               

               
Cow position:
               
chr29:31548473-31548331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1242-1403
               

               
Cow position:
               
chr29:13650916-13651076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
1252-1404
               

               
Cow position:
               
chr29:27263026-27262876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 0
               
Show alignments to all cow chromosomes.