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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8055M19.3
        

               
Conread position:
               
6-139
               

               
Cow position:
               
chr3:2855025-2854896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
31-331
               

               
Cow position:
               
chr3:24593194-24592900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
31-437
               

               
Cow position:
               
chr3:58946657-58947054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
31-548
               

               
Cow position:
               
chr3:17950611-17951135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
31-548
               

               
Cow position:
               
chr3:49676701-49677221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 29
               

               
Conread position:
               
31-548
               

               
Cow position:
               
chr3:52865802-52865286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
33-379
               

               
Cow position:
               
chr3:19877650-19877999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
33-509
               

               
Cow position:
               
chr3:6781044-6781523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
33-520
               

               
Cow position:
               
chr3:19937845-19938323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
33-520
               

               
Cow position:
               
chr3:36116588-36117076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
38-547
               

               
Cow position:
               
chr3:2910118-2909612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
39-438
               

               
Cow position:
               
chr3:3907980-3907576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 72
               

               
Conread position:
               
40-350
               

               
Cow position:
               
chr3:64359350-64359049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
64-261
               

               
Cow position:
               
chr3:60891123-60891321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
73-466
               

               
Cow position:
               
chr3:47741820-47741420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr3:66893196-66892866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
74-509
               

               
Cow position:
               
chr3:46678953-46678514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
74-520
               

               
Cow position:
               
chr3:14440764-14440317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
74-520
               

               
Cow position:
               
chr3:41212787-41212336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
74-520
               

               
Cow position:
               
chr3:46862338-46861889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
77-520
               

               
Cow position:
               
chr3:3521978-3522424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
84-369
               

               
Cow position:
               
chr3:15055085-15054811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
86-520
               

               
Cow position:
               
chr3:17829671-17829237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
86-540
               

               
Cow position:
               
chr3:37968062-37968518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
88-520
               

               
Cow position:
               
chr3:64649598-64650034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
98-520
               

               
Cow position:
               
chr3:2370172-2369749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
98-520
               

               
Cow position:
               
chr3:24313461-24313888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
99-520
               

               
Cow position:
               
chr3:32624018-32623593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
107-270
               

               
Cow position:
               
chr3:3979291-3979459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
118-520
               

               
Cow position:
               
chr3:15990024-15989618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
122-548
               

               
Cow position:
               
chr3:39325736-39326160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 334
               

               
Conread position:
               
123-519
               

               
Cow position:
               
chr3:48840659-48841059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
123-520
               

               
Cow position:
               
chr3:47082634-47082234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 167
               

               
Conread position:
               
154-494
               

               
Cow position:
               
chr3:48231856-48231521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
164-488
               

               
Cow position:
               
chr3:4284929-4285253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
164-518
               

               
Cow position:
               
chr3:49614919-49614564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr3:2916518-2916879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr3:7159724-7159371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr3:22334954-22335310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
164-520
               

               
Cow position:
               
chr3:64029030-64028673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 120
               

               
Conread position:
               
165-514
               

               
Cow position:
               
chr3:18543340-18542996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
166-548
               

               
Cow position:
               
chr3:63006074-63005679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
170-547
               

               
Cow position:
               
chr3:19801516-19801889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
172-520
               

               
Cow position:
               
chr3:72704259-72704607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
174-466
               

               
Cow position:
               
chr3:77473920-77474192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
178-489
               

               
Cow position:
               
chr3:23292303-23291992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr3:19758142-19757823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
178-504
               

               
Cow position:
               
chr3:5955071-5954742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
178-504
               

               
Cow position:
               
chr3:18810600-18810930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr3:66618314-66618637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr3:10238757-10239084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr3:43040577-43040258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
178-509
               

               
Cow position:
               
chr3:47273852-47273534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
180-504
               

               
Cow position:
               
chr3:21183570-21183252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
181-507
               

               
Cow position:
               
chr3:49013453-49013124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
189-895
               

               
Cow position:
               
chr3:19671866-19672571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
192-520
               

               
Cow position:
               
chr3:47616839-47616509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 85
               

               
Conread position:
               
215-466
               

               
Cow position:
               
chr3:56651116-56650866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
215-492
               

               
Cow position:
               
chr3:34031759-34031481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
215-505
               

               
Cow position:
               
chr3:2711816-2711529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
224-509
               

               
Cow position:
               
chr3:46502170-46502456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
230-503
               

               
Cow position:
               
chr3:42580778-42580512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
230-504
               

               
Cow position:
               
chr3:31355070-31354803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr3:207982-207707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr3:55230529-55230250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-513
               

               
Cow position:
               
chr3:34396875-34396595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
73, 37
               

               
Conread position:
               
230-539
               

               
Cow position:
               
chr3:5830449-5830146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr3:2633099-2633411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr3:44255803-44255494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-562
               

               
Cow position:
               
chr3:9715982-9716309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
230-604
               

               
Cow position:
               
chr3:66637219-66637583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
233-485
               

               
Cow position:
               
chr3:36882752-36882501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
233-508
               

               
Cow position:
               
chr3:64018211-64017931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr3:14888446-14888715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
233-509
               

               
Cow position:
               
chr3:48061672-48061390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
234-505
               

               
Cow position:
               
chr3:593757-594027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr3:5048000-5047731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
236-509
               

               
Cow position:
               
chr3:31898778-31898512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
242-551
               

               
Cow position:
               
chr3:40340829-40340519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
243-562
               

               
Cow position:
               
chr3:2653297-2653615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
67, 29
               

               
Conread position:
               
245-509
               

               
Cow position:
               
chr3:471518-471777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
247-509
               

               
Cow position:
               
chr3:78028241-78027979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
254-509
               

               
Cow position:
               
chr3:56341267-56341005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
265-546
               

               
Cow position:
               
chr3:3053815-3054079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
284-497
               

               
Cow position:
               
chr3:75041943-75041726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
310-509
               

               
Cow position:
               
chr3:69932630-69932833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
322-509
               

               
Cow position:
               
chr3:53514973-53515165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
322-509
               

               
Cow position:
               
chr3:59860608-59860797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
339-545
               

               
Cow position:
               
chr3:14634824-14634618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 78
               

               
Conread position:
               
342-505
               

               
Cow position:
               
chr3:66805065-66805231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
343-497
               

               
Cow position:
               
chr3:60210872-60210718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-519
               

               
Cow position:
               
chr3:24592342-24592165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
162, 110
               

               
Conread position:
               
343-528
               

               
Cow position:
               
chr3:21946138-21945953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
343-531
               

               
Cow position:
               
chr3:36099443-36099259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
343-535
               

               
Cow position:
               
chr3:32843160-32842972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
343-538
               

               
Cow position:
               
chr3:50011677-50011872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-548
               

               
Cow position:
               
chr3:6684724-6684929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-548
               

               
Cow position:
               
chr3:27906000-27905799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
343-624
               

               
Cow position:
               
chr3:19692817-19692542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
155, 77
               

               
Conread position:
               
343-704
               

               
Cow position:
               
chr3:15177586-15177940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
346-562
               

               
Cow position:
               
chr3:66118945-66119155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
349-500
               

               
Cow position:
               
chr3:48329688-48329838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
349-637
               

               
Cow position:
               
chr3:64358899-64358617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
361-548
               

               
Cow position:
               
chr3:26948613-26948800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
362-535
               

               
Cow position:
               
chr3:14755211-14755042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
363-518
               

               
Cow position:
               
chr3:57500240-57500088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
400-548
               

               
Cow position:
               
chr3:18464435-18464288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
454-1400
               

               
Cow position:
               
chr3:2369346-2368398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
950
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 807
               

               
Conread position:
               
524-1062
               

               
Cow position:
               
chr3:31415580-31416113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
526-970
               

               
Cow position:
               
chr3:75047751-75047318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
535-864
               

               
Cow position:
               
chr3:64357789-64357458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
539-1404
               

               
Cow position:
               
chr3:6685855-6686742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
674
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 129
               

               
Conread position:
               
545-1404
               

               
Cow position:
               
chr3:58947677-58948552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
892
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
549-907
               

               
Cow position:
               
chr3:24591253-24590901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
549-972
               

               
Cow position:
               
chr3:66991155-66991573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
549-1062
               

               
Cow position:
               
chr3:15178773-15179281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 34
               

               
Conread position:
               
549-1072
               

               
Cow position:
               
chr3:42631485-42632013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
560-970
               

               
Cow position:
               
chr3:19722105-19721676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
567-1038
               

               
Cow position:
               
chr3:12679949-12679461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
32, 348
               

               
Conread position:
               
567-1230
               

               
Cow position:
               
chr3:32616925-32616234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
567-1402
               

               
Cow position:
               
chr3:83233160-83232314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 39
               

               
Conread position:
               
567-1403
               

               
Cow position:
               
chr3:20870650-20869797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
568-1212
               

               
Cow position:
               
chr3:24643273-24643928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
568-1402
               

               
Cow position:
               
chr3:42995600-42994735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 49
               

               
Conread position:
               
571-1403
               

               
Cow position:
               
chr3:37953907-37953063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
30, 135
               

               
Conread position:
               
577-1111
               

               
Cow position:
               
chr3:4285888-4286429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 0
               

               
Conread position:
               
592-970
               

               
Cow position:
               
chr3:21304686-21304309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
597-1402
               

               
Cow position:
               
chr3:70887239-70888073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
598-830
               

               
Cow position:
               
chr3:19944145-19944393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
608-1183
               

               
Cow position:
               
chr3:49333901-49334476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 202
               

               
Conread position:
               
609-1013
               

               
Cow position:
               
chr3:3054805-3055199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
610-968
               

               
Cow position:
               
chr3:70097347-70097709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
610-1225
               

               
Cow position:
               
chr3:66367306-66367958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
614-1072
               

               
Cow position:
               
chr3:18356369-18355909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 61
               

               
Conread position:
               
617-1142
               

               
Cow position:
               
chr3:21259791-21259256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
617-1183
               

               
Cow position:
               
chr3:52864013-52863431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 183
               

               
Conread position:
               
617-1401
               

               
Cow position:
               
chr3:43415289-43416078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
617-1403
               

               
Cow position:
               
chr3:48230334-48229547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
623-1072
               

               
Cow position:
               
chr3:26836628-26836215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
623-1403
               

               
Cow position:
               
chr3:2907628-2906837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
611
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 116
               

               
Conread position:
               
624-1180
               

               
Cow position:
               
chr3:32841887-32841312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
634-1060
               

               
Cow position:
               
chr3:594728-595160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
644-958
               

               
Cow position:
               
chr3:77423961-77424284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
650-846
               

               
Cow position:
               
chr3:48060656-48060465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
650-972
               

               
Cow position:
               
chr3:36881746-36881427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 14
               

               
Conread position:
               
650-1399
               

               
Cow position:
               
chr3:53515789-53516543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 14
               

               
Conread position:
               
650-1403
               

               
Cow position:
               
chr3:5883714-5884478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 14
               

               
Conread position:
               
650-1403
               

               
Cow position:
               
chr3:45895382-45894619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
650-1403
               

               
Cow position:
               
chr3:45974673-45975437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 13
               

               
Conread position:
               
656-1055
               

               
Cow position:
               
chr3:6878884-6878496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
658-1404
               

               
Cow position:
               
chr3:21148549-21147798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
664-1384
               

               
Cow position:
               
chr3:45032921-45033663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 45
               

               
Conread position:
               
664-1400
               

               
Cow position:
               
chr3:2917641-2918394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
664-1400
               

               
Cow position:
               
chr3:3523201-3523953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 45
               

               
Conread position:
               
664-1400
               

               
Cow position:
               
chr3:46679611-46680359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 31
               

               
Conread position:
               
664-1400
               

               
Cow position:
               
chr3:46861123-46860370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 45
               

               
Conread position:
               
664-1400
               

               
Cow position:
               
chr3:66890783-66890031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
665-1084
               

               
Cow position:
               
chr3:18542227-18541801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 196
               

               
Conread position:
               
665-1400
               

               
Cow position:
               
chr3:7481051-7480299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
665-1403
               

               
Cow position:
               
chr3:21182506-21181766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
666-1044
               

               
Cow position:
               
chr3:3981930-3982306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
666-1400
               

               
Cow position:
               
chr3:18463388-18462638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
666-1403
               

               
Cow position:
               
chr3:23290157-23289400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 206
               

               
Conread position:
               
666-1403
               

               
Cow position:
               
chr3:63003367-63002608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
666-1403
               

               
Cow position:
               
chr3:66620354-66621117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 675
               

               
Conread position:
               
667-1403
               

               
Cow position:
               
chr3:60082726-60081982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
668-1400
               

               
Cow position:
               
chr3:56340246-56339487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
668-1403
               

               
Cow position:
               
chr3:72630251-72631008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
668-1403
               

               
Cow position:
               
chr3:75040989-75040226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
669-968
               

               
Cow position:
               
chr3:4027937-4028224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
669-1140
               

               
Cow position:
               
chr3:33846618-33846144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 150
               

               
Conread position:
               
670-1031
               

               
Cow position:
               
chr3:5995517-5995150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
670-1398
               

               
Cow position:
               
chr3:5953997-5953252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 227
               

               
Conread position:
               
670-1400
               

               
Cow position:
               
chr3:34030710-34029973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr3:18811689-18812435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr3:19756770-19756014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 8
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr3:46502722-46503480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 688
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr3:49137351-49136626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
670-1403
               

               
Cow position:
               
chr3:78027221-78026486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
671-1401
               

               
Cow position:
               
chr3:42432421-42433148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
675-1386
               

               
Cow position:
               
chr3:19939066-19939811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
677-1254
               

               
Cow position:
               
chr3:14439569-14438978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
678-1403
               

               
Cow position:
               
chr3:45774210-45773472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
678-1403
               

               
Cow position:
               
chr3:49545016-49544276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
679-1403
               

               
Cow position:
               
chr3:10239849-10240591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 318
               

               
Conread position:
               
682-1385
               

               
Cow position:
               
chr3:50915520-50916255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 201
               

               
Conread position:
               
682-1403
               

               
Cow position:
               
chr3:40823582-40824323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 413
               

               
Conread position:
               
682-1403
               

               
Cow position:
               
chr3:57484535-57483796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
682-1403
               

               
Cow position:
               
chr3:64017170-64016445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
683-1394
               

               
Cow position:
               
chr3:23213871-23213151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
686-1403
               

               
Cow position:
               
chr3:59861566-59862307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
701-1320
               

               
Cow position:
               
chr3:46347804-46347207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
703-1385
               

               
Cow position:
               
chr3:41211521-41210817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
709
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 38
               

               
Conread position:
               
703-1400
               

               
Cow position:
               
chr3:19878873-19879585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 347
               

               
Conread position:
               
704-1069
               

               
Cow position:
               
chr3:1516372-1516744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1082
               

               
Cow position:
               
chr3:49613760-49613379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1146
               

               
Cow position:
               
chr3:22336105-22336554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1150
               

               
Cow position:
               
chr3:64027869-64027416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1291
               

               
Cow position:
               
chr3:19736797-19737405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1384
               

               
Cow position:
               
chr3:6782601-6783280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1385
               

               
Cow position:
               
chr3:36117879-36118579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1385
               

               
Cow position:
               
chr3:40339895-40339196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1398
               

               
Cow position:
               
chr3:29331054-29330352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 331
               

               
Conread position:
               
704-1398
               

               
Cow position:
               
chr3:68699756-68699034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 584
               

               
Conread position:
               
704-1398
               

               
Cow position:
               
chr3:68873538-68872825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 394
               

               
Conread position:
               
704-1400
               

               
Cow position:
               
chr3:20380760-20381474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
704-1400
               

               
Cow position:
               
chr3:32622820-32622109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
704-1400
               

               
Cow position:
               
chr3:37969265-37969973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
705-1061
               

               
Cow position:
               
chr3:49272266-49271910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
273, 110
               

               
Conread position:
               
711-1400
               

               
Cow position:
               
chr3:24314691-24315401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
711-1400
               

               
Cow position:
               
chr3:64650850-64651564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
712-828
               

               
Cow position:
               
chr3:2710713-2710597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
712-934
               

               
Cow position:
               
chr3:74439528-74439750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
712-1080
               

               
Cow position:
               
chr3:50011902-50012269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 82
               

               
Conread position:
               
712-1402
               

               
Cow position:
               
chr3:49678023-49678732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 185
               

               
Conread position:
               
714-1403
               

               
Cow position:
               
chr3:42052916-42052223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
715-1366
               

               
Cow position:
               
chr3:30314801-30315458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 60
               

               
Conread position:
               
716-1250
               

               
Cow position:
               
chr3:37625209-37625749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
722-1277
               

               
Cow position:
               
chr3:4737738-4737161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
735-1329
               

               
Cow position:
               
chr3:52226794-52227389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 156
               

               
Conread position:
               
739-1060
               

               
Cow position:
               
chr3:16888789-16888466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
232, 53
               

               
Conread position:
               
740-944
               

               
Cow position:
               
chr3:7169045-7169250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
740-1022
               

               
Cow position:
               
chr3:51940160-51939887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
740-1030
               

               
Cow position:
               
chr3:48842424-48842714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 238
               

               
Conread position:
               
740-1330
               

               
Cow position:
               
chr3:77443614-77444178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 129
               

               
Conread position:
               
740-1400
               

               
Cow position:
               
chr3:18859667-18860344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 46
               

               
Conread position:
               
740-1400
               

               
Cow position:
               
chr3:27918688-27919354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 174
               

               
Conread position:
               
740-1400
               

               
Cow position:
               
chr3:47081158-47080482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 332
               

               
Conread position:
               
740-1401
               

               
Cow position:
               
chr3:27302296-27301649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
741-1050
               

               
Cow position:
               
chr3:18575938-18575632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
741-1317
               

               
Cow position:
               
chr3:52654609-52654033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
742-1400
               

               
Cow position:
               
chr3:7158461-7157793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 298
               

               
Conread position:
               
742-1404
               

               
Cow position:
               
chr3:29578888-29579560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 236
               

               
Conread position:
               
743-1385
               

               
Cow position:
               
chr3:57589831-57590455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
744-1403
               

               
Cow position:
               
chr3:79432449-79431771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 105
               

               
Conread position:
               
750-1403
               

               
Cow position:
               
chr3:54771167-54771797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
752-972
               

               
Cow position:
               
chr3:54341989-54341772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
775-1150
               

               
Cow position:
               
chr3:51242660-51243039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 351
               

               
Conread position:
               
779-934
               

               
Cow position:
               
chr3:45238084-45237929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
782-944
               

               
Cow position:
               
chr3:3782802-3782963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
783-975
               

               
Cow position:
               
chr3:60208309-60208118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
797-1400
               

               
Cow position:
               
chr3:47177966-47177341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 424
               

               
Conread position:
               
809-1157
               

               
Cow position:
               
chr3:80304844-80305199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
810-1242
               

               
Cow position:
               
chr3:52861812-52862247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
811-1400
               

               
Cow position:
               
chr3:36864130-36863531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 236
               

               
Conread position:
               
812-1375
               

               
Cow position:
               
chr3:6661130-6661703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
825-1403
               

               
Cow position:
               
chr3:50127313-50126691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 186
               

               
Conread position:
               
826-1344
               

               
Cow position:
               
chr3:78020919-78021436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
826-1399
               

               
Cow position:
               
chr3:83294547-83293981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 43
               

               
Conread position:
               
826-1403
               

               
Cow position:
               
chr3:24353286-24353837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
826-1403
               

               
Cow position:
               
chr3:65582925-65582349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 151
               

               
Conread position:
               
831-1400
               

               
Cow position:
               
chr3:2710521-2709937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 207
               

               
Conread position:
               
837-972
               

               
Cow position:
               
chr3:56322020-56322155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
837-1084
               

               
Cow position:
               
chr3:48059079-48058824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
837-1401
               

               
Cow position:
               
chr3:19944607-19945162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 135
               

               
Conread position:
               
870-1401
               

               
Cow position:
               
chr3:38493637-38494167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
870-1403
               

               
Cow position:
               
chr3:64357404-64356860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
874-1329
               

               
Cow position:
               
chr3:24293347-24292891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
874-1404
               

               
Cow position:
               
chr3:19890211-19889667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
877-1342
               

               
Cow position:
               
chr3:61030099-61030556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
878-1403
               

               
Cow position:
               
chr3:56397593-56398123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
905-1230
               

               
Cow position:
               
chr3:24589584-24589247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
910-1149
               

               
Cow position:
               
chr3:34091071-34090828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
910-1403
               

               
Cow position:
               
chr3:19800755-19800242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 369
               

               
Conread position:
               
916-1403
               

               
Cow position:
               
chr3:79116613-79117109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
52, 293
               

               
Conread position:
               
931-1400
               

               
Cow position:
               
chr3:7169656-7170131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
940-1233
               

               
Cow position:
               
chr3:7247133-7247440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
947-1159
               

               
Cow position:
               
chr3:13967551-13967332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
948-1385
               

               
Cow position:
               
chr3:8238538-8238999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
953-1403
               

               
Cow position:
               
chr3:42447570-42448040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 412
               

               
Conread position:
               
967-1403
               

               
Cow position:
               
chr3:13492879-13493321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 147
               

               
Conread position:
               
968-1246
               

               
Cow position:
               
chr3:4028372-4028673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
972-1351
               

               
Cow position:
               
chr3:45865632-45865245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
984-1375
               

               
Cow position:
               
chr3:19721169-19720766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 83
               

               
Conread position:
               
996-1284
               

               
Cow position:
               
chr3:56145797-56146102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
1003-1385
               

               
Cow position:
               
chr3:30331968-30331568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1011-1403
               

               
Cow position:
               
chr3:3841277-3840875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 186
               

               
Conread position:
               
1025-1403
               

               
Cow position:
               
chr3:53411727-53412102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 232
               

               
Conread position:
               
1030-1403
               

               
Cow position:
               
chr3:63269945-63270317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
1032-1403
               

               
Cow position:
               
chr3:58854364-58854721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
1040-1403
               

               
Cow position:
               
chr3:40342700-40343055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
1042-1385
               

               
Cow position:
               
chr3:48842809-48843167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 233
               

               
Conread position:
               
1042-1403
               

               
Cow position:
               
chr3:31419896-31420271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
1045-1402
               

               
Cow position:
               
chr3:12679280-12678906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 318
               

               
Conread position:
               
1051-1386
               

               
Cow position:
               
chr3:56098786-56099137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
1052-1213
               

               
Cow position:
               
chr3:24345753-24345927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1052-1379
               

               
Cow position:
               
chr3:34845709-34846056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
1053-1403
               

               
Cow position:
               
chr3:49271533-49271179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 212
               

               
Conread position:
               
1060-1401
               

               
Cow position:
               
chr3:64822684-64823038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
1061-1308
               

               
Cow position:
               
chr3:46016344-46016600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 242
               

               
Conread position:
               
1063-1400
               

               
Cow position:
               
chr3:2869360-2869711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 211
               

               
Conread position:
               
1080-1349
               

               
Cow position:
               
chr3:56326523-56326802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 160
               

               
Conread position:
               
1102-1400
               

               
Cow position:
               
chr3:63915496-63915184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 172
               

               
Conread position:
               
1102-1401
               

               
Cow position:
               
chr3:48058735-48058424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 237
               

               
Conread position:
               
1104-1341
               

               
Cow position:
               
chr3:3057464-3057704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 46
               

               
Conread position:
               
1104-1390
               

               
Cow position:
               
chr3:18355648-18355350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
1104-1400
               

               
Cow position:
               
chr3:4286706-4287016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 170
               

               
Conread position:
               
1104-1403
               

               
Cow position:
               
chr3:6877545-6877241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
1122-1400
               

               
Cow position:
               
chr3:5994449-5994157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1124-1402
               

               
Cow position:
               
chr3:15720373-15720656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
1141-1404
               

               
Cow position:
               
chr3:77424302-77424570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 183
               

               
Conread position:
               
1143-1403
               

               
Cow position:
               
chr3:34090700-34090443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
1148-1403
               

               
Cow position:
               
chr3:18541466-18541207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 108
               

               
Conread position:
               
1149-1304
               

               
Cow position:
               
chr3:74058244-74058404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
1154-1400
               

               
Cow position:
               
chr3:57753476-57753727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
1158-1400
               

               
Cow position:
               
chr3:30618239-30617994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
1161-1403
               

               
Cow position:
               
chr3:24445391-24445147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 114
               

               
Conread position:
               
1163-1403
               

               
Cow position:
               
chr3:648813-648579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 104
               

               
Conread position:
               
1165-1403
               

               
Cow position:
               
chr3:62788698-62788461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
1170-1404
               

               
Cow position:
               
chr3:42144163-42143927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1176-1396
               

               
Cow position:
               
chr3:69100767-69100548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
1178-1403
               

               
Cow position:
               
chr3:4666810-4667035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
1178-1403
               

               
Cow position:
               
chr3:63200322-63200542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
1181-1370
               

               
Cow position:
               
chr3:16899654-16899463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1205-1400
               

               
Cow position:
               
chr3:64027390-64027195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
1209-1403
               

               
Cow position:
               
chr3:67778847-67779040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
1212-1390
               

               
Cow position:
               
chr3:13475963-13476135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1212-1401
               

               
Cow position:
               
chr3:62733010-62733201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1214-1403
               

               
Cow position:
               
chr3:24589022-24588832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1233-1403
               

               
Cow position:
               
chr3:11198790-11198621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1234-1376
               

               
Cow position:
               
chr3:46816921-46816779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1234-1403
               

               
Cow position:
               
chr3:24346734-24346903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1235-1404
               

               
Cow position:
               
chr3:4028939-4029108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1236-1403
               

               
Cow position:
               
chr3:15181133-15181297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1239-1403
               

               
Cow position:
               
chr3:24644005-24644170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
1242-1403
               

               
Cow position:
               
chr3:16075269-16075430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1245-1368
               

               
Cow position:
               
chr3:61492169-61492290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1247-1400
               

               
Cow position:
               
chr3:36877906-36877753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1250-1403
               

               
Cow position:
               
chr3:37625779-37625931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1253-1403
               

               
Cow position:
               
chr3:4737085-4736937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 94
               

               
Conread position:
               
1262-1403
               

               
Cow position:
               
chr3:79314721-79314862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1270-1400
               

               
Cow position:
               
chr3:34506546-34506416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.