Cow genome map

Conread name: Ss1.1-Pig4-TMW8055M19.3

Conread position: 31-319
Cow position: chr9:11321416-11321699 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 110, 52

Conread position: 33-520
Cow position: chr9:3007376-3006892 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 316
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 113, 35

Conread position: 33-540
Cow position: chr9:2489070-2488559 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 41

Conread position: 38-543
Cow position: chr9:3802444-3802947 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 76

Conread position: 40-521
Cow position: chr9:2068176-2067688 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 319
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 28

Conread position: 43-430
Cow position: chr9:18002188-18002570 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 68

Conread position: 52-259
Cow position: chr9:13219178-13219400 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 74-520
Cow position: chr9:28676619-28677069 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 41

Conread position: 74-527
Cow position: chr9:12401183-12401634 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 286
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 42

Conread position: 74-548
Cow position: chr9:4671540-4672017 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 41

Conread position: 74-548
Cow position: chr9:45872277-45872760 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 322
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 72, 41

Conread position: 86-520
Cow position: chr9:17065444-17065006 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 29

Conread position: 98-497
Cow position: chr9:25482797-25483199 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 258
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 18

Conread position: 98-509
Cow position: chr9:50788510-50788938 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 274
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 18

Conread position: 98-519
Cow position: chr9:36723175-36723596 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 276
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 52, 18

Conread position: 98-520
Cow position: chr9:27933048-27933474 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 17

Conread position: 98-520
Cow position: chr9:33835317-33834891 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 270
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 18

Conread position: 98-520
Cow position: chr9:51201155-51201582 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 18

Conread position: 98-520
Cow position: chr9:51210320-51210747 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 54, 18

Conread position: 99-520
Cow position: chr9:25756248-25755826 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 267
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 17

Conread position: 113-414
Cow position: chr9:2501353-2501049 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 138

Conread position: 118-548
Cow position: chr9:59442842-59443269 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 76

Conread position: 123-520
Cow position: chr9:781821-781419 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 171

Conread position: 123-520
Cow position: chr9:16267338-16267741 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 263
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 171

Conread position: 163-520
Cow position: chr9:46626775-46626417 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 80, 121

Conread position: 164-520
Cow position: chr9:1077167-1076817 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 147, 73

Conread position: 164-520
Cow position: chr9:1252923-1252570 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 68, 119

Conread position: 164-520
Cow position: chr9:31195134-31194787 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 72, 100

Conread position: 164-520
Cow position: chr9:34243575-34243218 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 73, 94

Conread position: 164-613
Cow position: chr9:132879-132430 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 295
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 74, 120

Conread position: 165-507
Cow position: chr9:59456536-59456199 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 31

Conread position: 169-509
Cow position: chr9:6831472-6831141 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 27

Conread position: 173-509
Cow position: chr9:6051967-6051635 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 226
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 130, 23

Conread position: 178-504
Cow position: chr9:10855267-10855595 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 31

Conread position: 178-508
Cow position: chr9:22649997-22650325 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 125, 18

Conread position: 178-508
Cow position: chr9:59483589-59483263 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 125, 40

Conread position: 178-509
Cow position: chr9:1996832-1996510 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 125, 36

Conread position: 178-509
Cow position: chr9:4531274-4531597 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 18

Conread position: 178-509
Cow position: chr9:9012183-9012510 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 52

Conread position: 178-513
Cow position: chr9:30671435-30671777 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 104

Conread position: 189-497
Cow position: chr9:164628-164318 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 88

Conread position: 189-562
Cow position: chr9:832363-831979 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 204-509
Cow position: chr9:59175058-59174755 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 77

Conread position: 215-504
Cow position: chr9:6249260-6249545 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 13

Conread position: 215-504
Cow position: chr9:16174880-16175161 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 18

Conread position: 215-504
Cow position: chr9:37972099-37971811 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 19, 13

Conread position: 215-509
Cow position: chr9:60279456-60279162 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 13

Conread position: 218-504
Cow position: chr9:47001332-47001609 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 10

Conread position: 218-509
Cow position: chr9:3549058-3548768 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 62

Conread position: 224-509
Cow position: chr9:31019929-31020229 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 43

Conread position: 230-509
Cow position: chr9:793333-793077 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 230-509
Cow position: chr9:3155203-3155475 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 35

Conread position: 230-527
Cow position: chr9:15071662-15071954 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 74, 37

Conread position: 230-548
Cow position: chr9:34990803-34991101 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 55, 37

Conread position: 233-508
Cow position: chr9:10320954-10321228 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 47

Conread position: 233-509
Cow position: chr9:29629622-29629345 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 69, 47

Conread position: 233-509
Cow position: chr9:37163678-37163405 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 47

Conread position: 235-509
Cow position: chr9:28020677-28020949 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 45

Conread position: 236-509
Cow position: chr9:37130383-37130114 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 68, 44

Conread position: 237-548
Cow position: chr9:10314540-10314844 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 7, 31

Conread position: 246-504
Cow position: chr9:32967617-32967878 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 34

Conread position: 246-509
Cow position: chr9:18510581-18510322 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 34

Conread position: 247-509
Cow position: chr9:59535243-59535507 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 31

Conread position: 254-513
Cow position: chr9:28626851-28626597 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 13

Conread position: 258-538
Cow position: chr9:1294732-1294453 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 33

Conread position: 272-548
Cow position: chr9:8969869-8969593 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 322-509
Cow position: chr9:42568084-42568275 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 332-509
Cow position: chr9:17527525-17527342 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 334-509
Cow position: chr9:42308905-42309084 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 336-518
Cow position: chr9:13219593-13219775 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 343-528
Cow position: chr9:26237365-26237546 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 343-528
Cow position: chr9:34107619-34107434 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 83, 35

Conread position: 347-548
Cow position: chr9:54359846-54360047 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 347-551
Cow position: chr9:23400887-23401085 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 349-553
Cow position: chr9:10318757-10318963 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 55, 179

Conread position: 356-535
Cow position: chr9:20310467-20310290 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 527-1063
Cow position: chr9:42555921-42556482 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 372
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 73, 22

Conread position: 538-1063
Cow position: chr9:13476867-13476326 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 549-1093
Cow position: chr9:28688122-28688687 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 73

Conread position: 549-1230
Cow position: chr9:3803366-3804079 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 582

Conread position: 552-899
Cow position: chr9:3354646-3354296 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 54

Conread position: 558-965
Cow position: chr9:3226519-3226105 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 272
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 38

Conread position: 559-1070
Cow position: chr9:59511428-59511949 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 9

Conread position: 560-1403
Cow position: chr9:3937378-3936526 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 196

Conread position: 560-1403
Cow position: chr9:9705598-9706449 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 20

Conread position: 567-926
Cow position: chr9:7012769-7013122 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 49

Conread position: 567-1231
Cow position: chr9:59425810-59426508 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 318

Conread position: 567-1403
Cow position: chr9:52291464-52292311 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 568-1077
Cow position: chr9:3393553-3393047 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 571-1083
Cow position: chr9:4651059-4650538 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 344
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 87

Conread position: 571-1403
Cow position: chr9:5514473-5515324 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 222

Conread position: 597-1399
Cow position: chr9:6249385-6250201 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 598-1401
Cow position: chr9:44818259-44819052 (view UCSC Genome Browser custom track)
Alignm length: 836
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 158

Conread position: 601-1403
Cow position: chr9:27034769-27035589 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 608-1403
Cow position: chr9:12121080-12121855 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 511
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 126

Conread position: 609-1121
Cow position: chr9:7091074-7091605 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 341
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 129

Conread position: 613-1147
Cow position: chr9:1636055-1636584 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 80

Conread position: 613-1183
Cow position: chr9:47544837-47545416 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 60

Conread position: 613-1402
Cow position: chr9:20309057-20308245 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 209

Conread position: 613-1403
Cow position: chr9:9646270-9647028 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 51

Conread position: 615-1401
Cow position: chr9:64119319-64120120 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 204

Conread position: 623-1403
Cow position: chr9:29328757-29329541 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 212

Conread position: 624-1150
Cow position: chr9:4281890-4282412 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 10

Conread position: 632-1086
Cow position: chr9:60464523-60464059 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 310
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 40

Conread position: 639-968
Cow position: chr9:12061688-12062018 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 33

Conread position: 645-1404
Cow position: chr9:51182061-51181276 (view UCSC Genome Browser custom track)
Alignm length: 790
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 24

Conread position: 650-1403
Cow position: chr9:4532637-4533395 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 14

Conread position: 650-1403
Cow position: chr9:16175913-16176676 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 14

Conread position: 650-1403
Cow position: chr9:60277876-60277108 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 658-1084
Cow position: chr9:1980137-1980564 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 661-925
Cow position: chr9:21381150-21380888 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 5

Conread position: 664-1105
Cow position: chr9:25035695-25035250 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 664-1400
Cow position: chr9:28678123-28678874 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 665-972
Cow position: chr9:6050897-6050589 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 161

Conread position: 665-1403
Cow position: chr9:30672519-30673273 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 21

Conread position: 665-1403
Cow position: chr9:47002340-47003100 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 67

Conread position: 666-1057
Cow position: chr9:37095679-37096069 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 257
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 68

Conread position: 668-1385
Cow position: chr9:59174009-59173259 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 627

Conread position: 669-1400
Cow position: chr9:18509647-18508909 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 278

Conread position: 670-972
Cow position: chr9:7002941-7003244 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1002
Cow position: chr9:2186125-2186452 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 49

Conread position: 670-1149
Cow position: chr9:6830350-6829871 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 58

Conread position: 670-1403
Cow position: chr9:3566693-3565939 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 417

Conread position: 670-1403
Cow position: chr9:7061933-7061176 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 8

Conread position: 670-1403
Cow position: chr9:29628588-29627846 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 8

Conread position: 670-1403
Cow position: chr9:59536254-59537004 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 137

Conread position: 675-1400
Cow position: chr9:17064231-17063485 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 26

Conread position: 675-1403
Cow position: chr9:5004152-5004878 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 678-1132
Cow position: chr9:27934253-27934710 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 678-1403
Cow position: chr9:42309845-42310587 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 394

Conread position: 679-956
Cow position: chr9:25023135-25022858 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 51

Conread position: 679-1400
Cow position: chr9:29028035-29027307 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 679-1400
Cow position: chr9:37971045-37970292 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 460

Conread position: 679-1404
Cow position: chr9:9013264-9014002 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 148

Conread position: 682-894
Cow position: chr9:1995749-1995531 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 51

Conread position: 682-1248
Cow position: chr9:59444015-59444595 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 186

Conread position: 703-887
Cow position: chr9:163317-163133 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 38

Conread position: 703-940
Cow position: chr9:16268558-16268795 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 38

Conread position: 703-1400
Cow position: chr9:42569092-42569807 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 208

Conread position: 703-1403
Cow position: chr9:22653759-22654479 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 526

Conread position: 703-1403
Cow position: chr9:37162620-37161906 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 87

Conread position: 704-915
Cow position: chr9:60651525-60651314 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 38

Conread position: 704-949
Cow position: chr9:25755036-25754792 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-970
Cow position: chr9:49177640-49177374 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 704-1287
Cow position: chr9:2487943-2487319 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1385
Cow position: chr9:222339-221635 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr9:780617-779906 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr9:1076010-1075311 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 704-1400
Cow position: chr9:3006057-3005347 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 216

Conread position: 704-1400
Cow position: chr9:28439996-28440712 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 37

Conread position: 711-913
Cow position: chr9:25484065-25484267 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 17, 30

Conread position: 711-1307
Cow position: chr9:30826876-30827488 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 64

Conread position: 711-1382
Cow position: chr9:45873541-45874221 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 712-1313
Cow position: chr9:30487754-30488386 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 384

Conread position: 712-1403
Cow position: chr9:2171259-2171954 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 127

Conread position: 712-1403
Cow position: chr9:3167156-3167837 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 34

Conread position: 712-1403
Cow position: chr9:28021999-28022711 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 97

Conread position: 715-1314
Cow position: chr9:53702520-53701914 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 36

Conread position: 716-1067
Cow position: chr9:31064632-31064990 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 722-1346
Cow position: chr9:36724710-36725350 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 8

Conread position: 725-1141
Cow position: chr9:3543053-3543476 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 0

Conread position: 740-960
Cow position: chr9:6974950-6975180 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 31

Conread position: 740-1084
Cow position: chr9:59455037-59454691 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 176

Conread position: 740-1138
Cow position: chr9:64018238-64017834 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 0

Conread position: 740-1164
Cow position: chr9:9329871-9329437 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 286
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 229, 22

Conread position: 740-1349
Cow position: chr9:130966-130336 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 503

Conread position: 740-1400
Cow position: chr9:1251771-1251086 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 149

Conread position: 740-1400
Cow position: chr9:50790937-50791616 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 538

Conread position: 740-1400
Cow position: chr9:51210905-51211584 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 391

Conread position: 741-1401
Cow position: chr9:7016124-7016788 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 23

Conread position: 742-960
Cow position: chr9:50039103-50039317 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 744-1403
Cow position: chr9:31807799-31808483 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 5

Conread position: 745-1403
Cow position: chr9:10322034-10322710 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 249

Conread position: 747-1403
Cow position: chr9:34722146-34722814 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 43

Conread position: 754-1402
Cow position: chr9:43664065-43664703 (view UCSC Genome Browser custom track)
Alignm length: 665
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 35

Conread position: 758-1403
Cow position: chr9:2053009-2053654 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 168

Conread position: 761-1067
Cow position: chr9:44795522-44795821 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 770-1395
Cow position: chr9:25187361-25188002 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 30

Conread position: 789-1128
Cow position: chr9:14762171-14761837 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 29

Conread position: 800-1403
Cow position: chr9:32969234-32969854 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 415

Conread position: 806-1403
Cow position: chr9:828832-828225 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 69

Conread position: 810-1069
Cow position: chr9:2205254-2205513 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 39

Conread position: 812-1403
Cow position: chr9:3763307-3763908 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 134

Conread position: 812-1403
Cow position: chr9:59482503-59481890 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 69

Conread position: 814-1403
Cow position: chr9:28695760-28696368 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 376
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 155, 256

Conread position: 826-1312
Cow position: chr9:3998321-3998827 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 483

Conread position: 829-1400
Cow position: chr9:4943500-4942903 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 452

Conread position: 835-1135
Cow position: chr9:17757293-17757591 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 185, 94

Conread position: 877-1403
Cow position: chr9:25633647-25633105 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 889-1403
Cow position: chr9:2209670-2210199 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 85

Conread position: 892-1098
Cow position: chr9:28653950-28654166 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 902-1114
Cow position: chr9:40223674-40223893 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 922-1401
Cow position: chr9:54924964-54925457 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 12

Conread position: 926-1220
Cow position: chr9:2492949-2492653 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 13

Conread position: 931-1403
Cow position: chr9:10936993-10937500 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 318

Conread position: 940-1403
Cow position: chr9:27782643-27783091 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 318
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 70

Conread position: 946-1395
Cow position: chr9:8401970-8402426 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 80

Conread position: 969-1403
Cow position: chr9:50729660-50729230 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 42

Conread position: 984-1403
Cow position: chr9:2476239-2476665 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 38

Conread position: 991-1403
Cow position: chr9:7003287-7003706 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 282

Conread position: 996-1400
Cow position: chr9:3148787-3148367 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 280

Conread position: 1013-1404
Cow position: chr9:2498476-2498088 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 96

Conread position: 1025-1216
Cow position: chr9:21268757-21268958 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 1025-1327
Cow position: chr9:22089056-22089356 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 195
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 45

Conread position: 1026-1403
Cow position: chr9:17305460-17305070 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 1030-1402
Cow position: chr9:2867451-2867078 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 1040-1363
Cow position: chr9:28015104-28014768 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 188

Conread position: 1043-1382
Cow position: chr9:26083985-26083638 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 98

Conread position: 1045-1403
Cow position: chr9:26102548-26102184 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 57

Conread position: 1054-1403
Cow position: chr9:12062547-12062902 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 39

Conread position: 1058-1400
Cow position: chr9:31065267-31065621 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 176

Conread position: 1058-1403
Cow position: chr9:35316304-35315970 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 177, 210

Conread position: 1060-1393
Cow position: chr9:8095938-8096272 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 92, 185

Conread position: 1061-1401
Cow position: chr9:13475245-13474885 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 55

Conread position: 1064-1399
Cow position: chr9:1980825-1981177 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 1070-1403
Cow position: chr9:22431841-22432182 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 1077-1403
Cow position: chr9:239913-239586 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 113, 56

Conread position: 1090-1395
Cow position: chr9:2186458-2186767 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 180

Conread position: 1092-1365
Cow position: chr9:3738627-3738910 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 133

Conread position: 1096-1400
Cow position: chr9:25035126-25034807 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 178

Conread position: 1103-1400
Cow position: chr9:25903107-25903415 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 167

Conread position: 1122-1401
Cow position: chr9:4649982-4649694 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 124

Conread position: 1124-1400
Cow position: chr9:27934993-27935283 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 151

Conread position: 1135-1403
Cow position: chr9:9329260-9328977 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 209

Conread position: 1153-1402
Cow position: chr9:9314411-9314170 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 182

Conread position: 1155-1404
Cow position: chr9:28655008-28655260 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 66

Conread position: 1161-1384
Cow position: chr9:6829655-6829430 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 105

Conread position: 1161-1403
Cow position: chr9:3543521-3543765 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 1161-1404
Cow position: chr9:651354-651108 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 1170-1400
Cow position: chr9:16629995-16629765 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 25, 35

Conread position: 1170-1400
Cow position: chr9:64015970-64015738 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 9, 93

Conread position: 1176-1403
Cow position: chr9:39731376-39731152 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 135

Conread position: 1178-1403
Cow position: chr9:8166207-8165975 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 0

Conread position: 1211-1403
Cow position: chr9:2492378-2492189 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 12

Conread position: 1219-1403
Cow position: chr9:44453470-44453652 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 1220-1402
Cow position: chr9:25582485-25582303 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 129

Conread position: 1221-1400
Cow position: chr9:9824875-9825055 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 40

Conread position: 1234-1403
Cow position: chr9:3804282-3804446 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 1234-1403
Cow position: chr9:24981181-24981013 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 81

Conread position: 1234-1403
Cow position: chr9:32296503-32296340 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 152, 90

Conread position: 1237-1403
Cow position: chr9:21410034-21410200 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 144
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1240-1400
Cow position: chr9:6977081-6977241 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 132
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1242-1403
Cow position: chr9:3727343-3727505 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 88

Conread position: 1243-1404
Cow position: chr9:2482571-2482737 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 17

Conread position: 1267-1375
Cow position: chr9:1637155-1637263 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1272-1401
Cow position: chr9:50698078-50698207 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.