Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 273-409
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 273-411
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 273-411
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 278-394
Cow position:
Alignm length: 117
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 278-410
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 284-397
Cow position:
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 288-411
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 289-429
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 291-397
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 291-412
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 292-411
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 294-411
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 383-730
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 245, 28

Conread position: 396-537
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 396-546
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 396-555
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 149

Conread position: 396-569
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 134, 144

Conread position: 396-575
Cow position:
Alignm length: 180
Alignm identity: 142
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 143, 0

Conread position: 396-617
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 143, 0

Conread position: 396-622
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-623
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 174, 17

Conread position: 396-651
Cow position:
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-686
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 151

Conread position: 396-689
Cow position:
Alignm length: 297
Alignm identity: 194
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 47

Conread position: 396-704
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-713
Cow position:
Alignm length: 318
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 396-717
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-717
Cow position:
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-717
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 396-722
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 46

Conread position: 396-722
Cow position:
Alignm length: 327
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 396-723
Cow position:
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 143

Conread position: 396-725
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 71

Conread position: 396-725
Cow position:
Alignm length: 330
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 396-727
Cow position:
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-728
Cow position:
Alignm length: 333
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 396-731
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 9

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 64

Conread position: 396-731
Cow position:
Alignm length: 346
Alignm identity: 242
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 82, 8

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-731
Cow position:
Alignm length: 346
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 79

Conread position: 396-731
Cow position:
Alignm length: 340
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 255

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 397-722
Cow position:
Alignm length: 327
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 95

Conread position: 397-731
Cow position:
Alignm length: 337
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 152

Conread position: 398-513
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 398-519
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 398-634
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 148

Conread position: 398-662
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 398-689
Cow position:
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 143

Conread position: 398-701
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 157, 37

Conread position: 398-717
Cow position:
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-719
Cow position:
Alignm length: 324
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 242, 61

Conread position: 398-723
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 246, 144

Conread position: 398-725
Cow position:
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 166, 58

Conread position: 398-728
Cow position:
Alignm length: 331
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-730
Cow position:
Alignm length: 343
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 22

Conread position: 398-730
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 89

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 154

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 144

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 212

Conread position: 399-692
Cow position:
Alignm length: 294
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 399-719
Cow position:
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 69

Conread position: 399-731
Cow position:
Alignm length: 333
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 402-725
Cow position:
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 74

Conread position: 404-731
Cow position:
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 404-731
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 70

Conread position: 404-731
Cow position:
Alignm length: 329
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 137

Conread position: 404-731
Cow position:
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 404-731
Cow position:
Alignm length: 328
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 405-724
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 37

Conread position: 405-731
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 407-731
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 132, 177

Conread position: 407-731
Cow position:
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 410-605
Cow position:
Alignm length: 196
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 131, 0

Conread position: 410-717
Cow position:
Alignm length: 309
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 288, 49

Conread position: 410-730
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 420-731
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 426-730
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 176

Conread position: 436-731
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 5, 20

Conread position: 438-719
Cow position:
Alignm length: 282
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 438-731
Cow position:
Alignm length: 294
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 438-731
Cow position:
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 57

Conread position: 439-731
Cow position:
Alignm length: 293
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 453-607
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 453-681
Cow position:
Alignm length: 229
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 456-598
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 458-719
Cow position:
Alignm length: 262
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 467-723
Cow position:
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 468-731
Cow position:
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 469-698
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 80

Conread position: 485-687
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 492-730
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 33

Conread position: 511-731
Cow position:
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 524-716
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 524-731
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 525-727
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 10

Conread position: 538-694
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 540-731
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 541-719
Cow position:
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 543-731
Cow position:
Alignm length: 189
Alignm identity: 149
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 544-691
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 564-731
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 21

Conread position: 591-731
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 600-731
Cow position:
Alignm length: 132
Alignm identity: 109
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 600-731
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 623-731
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 623-731
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 630-731
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 630-731
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 0

Show alignments to all cow chromosomes.