Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 152-411
Cow position:
Alignm length: 261
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 128, 254

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 278-404
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 278-409
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-410
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 282-397
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 289-403
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-404
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 289-411
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 96, 116

Conread position: 289-412
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 374-685
Cow position:
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 169

Conread position: 383-651
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 118

Conread position: 383-719
Cow position:
Alignm length: 340
Alignm identity: 225
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 39

Conread position: 388-731
Cow position:
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 392-731
Cow position:
Alignm length: 354
Alignm identity: 229
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 229

Conread position: 395-725
Cow position:
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 395-731
Cow position:
Alignm length: 340
Alignm identity: 229
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 70

Conread position: 396-499
Cow position:
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 396-564
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 0

Conread position: 396-564
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 145, 8

Conread position: 396-565
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 143, 0

Conread position: 396-614
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 147

Conread position: 396-624
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 138, 15

Conread position: 396-625
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 198

Conread position: 396-676
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 396-715
Cow position:
Alignm length: 320
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-717
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 275, 15

Conread position: 396-720
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 104, 154

Conread position: 396-720
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 122

Conread position: 396-721
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 239, 107

Conread position: 396-722
Cow position:
Alignm length: 327
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 396-725
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 76

Conread position: 396-726
Cow position:
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 86

Conread position: 396-727
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 46

Conread position: 396-729
Cow position:
Alignm length: 335
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 153

Conread position: 396-730
Cow position:
Alignm length: 348
Alignm identity: 239
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 136

Conread position: 396-730
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 164

Conread position: 396-730
Cow position:
Alignm length: 352
Alignm identity: 237
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 136, 67

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 144

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 51, 14

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 396-731
Cow position:
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 146

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 71

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 154

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 396-731
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 46

Conread position: 396-731
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 118

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 396-731
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 48, 128

Conread position: 397-728
Cow position:
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 144

Conread position: 397-730
Cow position:
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 397-731
Cow position:
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 397-731
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 50, 45

Conread position: 397-731
Cow position:
Alignm length: 339
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 142

Conread position: 398-635
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 398-637
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 94

Conread position: 398-649
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 85

Conread position: 398-719
Cow position:
Alignm length: 322
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 398-722
Cow position:
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-725
Cow position:
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 37

Conread position: 398-727
Cow position:
Alignm length: 333
Alignm identity: 229
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 44

Conread position: 398-728
Cow position:
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-728
Cow position:
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 228, 111

Conread position: 398-728
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 398-730
Cow position:
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 193

Conread position: 398-731
Cow position:
Alignm length: 338
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 253

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 398-731
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 143

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 398-731
Cow position:
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 254

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 335
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 250

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 399-621
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 85, 21

Conread position: 399-730
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 21

Conread position: 399-730
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 399-731
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 401-713
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 95

Conread position: 402-631
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 402-719
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 143

Conread position: 402-731
Cow position:
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 0

Conread position: 402-731
Cow position:
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 404-723
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 133, 16

Conread position: 404-730
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 314, 58

Conread position: 405-608
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 15

Conread position: 405-674
Cow position:
Alignm length: 272
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 225, 118

Conread position: 405-719
Cow position:
Alignm length: 317
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 244

Conread position: 405-728
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 134, 0

Conread position: 410-725
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 410-731
Cow position:
Alignm length: 322
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 411-731
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 411-731
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 236, 106

Conread position: 412-731
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 416-730
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 417-731
Cow position:
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 241, 125

Conread position: 420-719
Cow position:
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 425-731
Cow position:
Alignm length: 307
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 426-727
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 426-731
Cow position:
Alignm length: 311
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 123

Conread position: 427-730
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 28

Conread position: 427-731
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 428-725
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 236, 26

Conread position: 431-731
Cow position:
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 110

Conread position: 435-726
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 64

Conread position: 435-731
Cow position:
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 443-731
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 444-731
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 32

Conread position: 449-728
Cow position:
Alignm length: 282
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 114, 49

Conread position: 464-731
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 79

Conread position: 465-731
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 28

Conread position: 475-731
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 74

Conread position: 478-725
Cow position:
Alignm length: 249
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 97

Conread position: 483-688
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 484-698
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 67

Conread position: 485-731
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 38

Conread position: 520-681
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 59

Conread position: 524-725
Cow position:
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 542-731
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 549-731
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 582-723
Cow position:
Alignm length: 144
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 615-732
Cow position:
Alignm length: 118
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 620-731
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 630-731
Cow position:
Alignm length: 102
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 636-725
Cow position:
Alignm length: 90
Alignm identity: 79
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Show alignments to all cow chromosomes.