Cow genome map

Conread name: Ss1.1-Pig4-TMW8056B14.3

Conread position: 273-397
Cow position:
Alignm length: 125
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 273-397
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 278-396
Cow position:
Alignm length: 119
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 278-397
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 126, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-411
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 278-412
Cow position:
Alignm length: 135
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 289-396
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 289-397
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 289-411
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 289-412
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 290-397
Cow position:
Alignm length: 108
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 291-423
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 292-397
Cow position:
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 303-409
Cow position:
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 344-731
Cow position:
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 198

Conread position: 377-606
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 171, 10

Conread position: 387-663
Cow position:
Alignm length: 279
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 45

Conread position: 388-731
Cow position:
Alignm length: 344
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 394-707
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 185, 59

Conread position: 396-540
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 396-570
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 148

Conread position: 396-608
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-649
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-665
Cow position:
Alignm length: 271
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 183, 58

Conread position: 396-687
Cow position:
Alignm length: 297
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 40, 151

Conread position: 396-719
Cow position:
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 110

Conread position: 396-719
Cow position:
Alignm length: 324
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 396-720
Cow position:
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 396-723
Cow position:
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 42

Conread position: 396-723
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 396-729
Cow position:
Alignm length: 334
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 396-730
Cow position:
Alignm length: 335
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 396-731
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 47

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 339
Alignm identity: 221
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 50

Conread position: 396-731
Cow position:
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 92

Conread position: 396-731
Cow position:
Alignm length: 340
Alignm identity: 228
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 146

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 396-731
Cow position:
Alignm length: 338
Alignm identity: 230
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 275, 9

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 104

Conread position: 396-731
Cow position:
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 98

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 326, 127

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 396-731
Cow position:
Alignm length: 337
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 396-731
Cow position:
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 396-731
Cow position:
Alignm length: 338
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 143

Conread position: 397-619
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 146, 0

Conread position: 397-662
Cow position:
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 46

Conread position: 397-731
Cow position:
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 0

Conread position: 398-607
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 0

Conread position: 398-634
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 44

Conread position: 398-671
Cow position:
Alignm length: 275
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 65

Conread position: 398-719
Cow position:
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 398-723
Cow position:
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-723
Cow position:
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 398-730
Cow position:
Alignm length: 333
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 32

Conread position: 398-731
Cow position:
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 153

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 398-731
Cow position:
Alignm length: 334
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 399-727
Cow position:
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 399-731
Cow position:
Alignm length: 334
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 138

Conread position: 401-731
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 402-725
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 110

Conread position: 402-725
Cow position:
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 402-731
Cow position:
Alignm length: 330
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 404-560
Cow position:
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 145, 0

Conread position: 404-725
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 250

Conread position: 404-731
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 73, 147

Conread position: 410-726
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 132

Conread position: 412-719
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 414-731
Cow position:
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 5

Conread position: 414-731
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 110

Conread position: 420-731
Cow position:
Alignm length: 312
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 431-731
Cow position:
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 431-731
Cow position:
Alignm length: 303
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 55

Conread position: 438-719
Cow position:
Alignm length: 284
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 112

Conread position: 444-731
Cow position:
Alignm length: 288
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 448-607
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 456-730
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 92

Conread position: 456-731
Cow position:
Alignm length: 276
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 458-731
Cow position:
Alignm length: 274
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 463-728
Cow position:
Alignm length: 271
Alignm identity: 189
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 181, 76

Conread position: 464-731
Cow position:
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 86

Conread position: 467-730
Cow position:
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 36

Conread position: 468-731
Cow position:
Alignm length: 265
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 47

Conread position: 478-731
Cow position:
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 489-713
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 211, 34

Conread position: 497-731
Cow position:
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 509-731
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 515-725
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 517-730
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 525-722
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 542-701
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 106

Conread position: 542-731
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 543-724
Cow position:
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 113

Conread position: 543-731
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 543-731
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 544-731
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 174, 0

Conread position: 548-671
Cow position:
Alignm length: 124
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 584-731
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 587-725
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 599-731
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 606-731
Cow position:
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 52

Conread position: 609-731
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.